Microexon ID Os_6:5283807-5283816:-
Species Oryza sativa
Coordinates 6:5283807..5283816
Microexon Cluster ID MEP25
Size 10
Phase 2
Pfam Domain Motif CDP-OH_P_transf
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,10,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACCTAATATG
Microexon Amino Acid seq PPNM
Microexon-tag DNA Seq CTCCAGCCCTTCTGGAGCAGATGCGTCACCCTCTTCCCGCTCTGGATGCCACCTAATATGATCACACTCACTGGATTCATGTTTCTAGTTGTATCAGCACTTCTTGGC
Microexon-tag Amino Acid Seq LQPFWSRCVTLFPLWMPPNMITLTGFMFLVVSALLG
Microexon-tag spanning region5283684-5285839
Microexon-tag prediction score0.9683
Overlapped with the annotated transcript (%) 100
New Transcript ID Os06t0204400-01x
Reference Transcript ID Os06t0204400-01
Gene ID Os06g0204400
Gene Name NA
Transcript ID Os06t0204400-01
Protein ID Os06t0204400-01
Gene ID Os06g0204400
Gene Name NA
Pfam domain motif CDP-OH_P_transf
Motif E-value 1.5e-16
Motif start 47
Motif end 120
Protein seq >Os06t0204400-01
MGYIGAHGVETLKRYRYSGQDHSVVAKYVLQPFWSRCVTLFPLWMPPNMITLTGFMFLVVSALLGYIYSPHLDTAPPRWV
HLAHGLLLFLYQTFDAVDGKQARRTSSSSPLGELFDHGCDALACAFEALALGSTLMCGRFTFCFWVIAAVPFYLATWEHF
FTNTLILPLINGPTEGLMLIYLSHSFTFLTGAEWWAQDFRKSIPLLSWVPLPFIPDIPLYIIVMILMILFAVIPTIGSNV
SNVQKVVEARKGSMVLALAMLLPFIALLTGVAVWSYLSPSDIMRNQPHLLVIGTGFAFGYLVVSF*
CDS seq >Os06t0204400-01
ATGGGGTACATCGGGGCGCACGGGGTGGAGACGCTGAAGCGGTACAGGTACAGCGGGCAGGACCACTCGGTGGTGGCCAA
GTACGTGCTCCAGCCCTTCTGGAGCAGATGCGTCACCCTCTTCCCGCTCTGGATGCCACCTAATATGATCACACTCACTG
GATTCATGTTTCTAGTTGTATCAGCACTTCTTGGCTATATCTATTCGCCCCACCTCGACACAGCTCCCCCTAGGTGGGTC
CATCTTGCCCATGGATTACTTCTCTTCTTATACCAGACTTTTGATGCTGTTGATGGTAAACAAGCAAGGCGCACTAGCTC
ATCAAGTCCTCTAGGAGAACTTTTTGATCATGGATGTGATGCTCTTGCCTGTGCTTTTGAAGCATTAGCCCTTGGAAGCA
CCTTGATGTGTGGAAGGTTTACTTTCTGTTTCTGGGTGATTGCTGCTGTCCCGTTCTATCTTGCAACATGGGAACACTTC
TTTACAAATACACTTATTCTTCCTTTAATAAATGGACCTACGGAGGGCCTGATGCTGATATATCTATCCCACTCTTTTAC
CTTTCTTACTGGCGCTGAATGGTGGGCACAAGATTTTCGGAAGTCGATACCCCTTTTAAGTTGGGTACCCCTTCCATTTA
TTCCAGATATCCCCTTATACATTATTGTGATGATTCTTATGATCCTGTTTGCCGTAATCCCTACCATTGGATCCAATGTC
AGCAATGTCCAAAAAGTAGTTGAAGCAAGAAAAGGAAGCATGGTATTGGCATTGGCAATGCTCCTTCCTTTCATTGCATT
GTTAACTGGAGTTGCTGTCTGGTCTTACCTCTCTCCTTCAGATATTATGAGGAATCAGCCACATCTGCTTGTGATCGGAA
CTGGTTTTGCTTTTGGATATTTGGTGGTAAGTTTTTAA
Microexon DNA seq ACCTAATATG
Microexon Amino Acid seq PPNM
Microexon-tag DNA Seq CTCCAGCCCTTCTGGAGCAGATGCGTCACCCTCTTCCCGCTCTGGATGCCACCTAATATGATCACACTCACTGGATTCATGTTTCTAGTTGTATCAGCACTTCTTGGC
Microexon-tag Amino Acid seq LQPFWSRCVTLFPLWMPPNMITLTGFMFLVVSALLG
Transcript ID Os.28668.1
Gene ID Os.28668
Gene Name NA
Pfam domain motif CDP-OH_P_transf
Motif E-value 2.2e-16
Motif start 47
Motif end 120
Protein seq >Os.28668.1
MGYIGAHGVETLKRYRYSGQDHSVVAKYVLQPFWSRCVTLFPLWMPPNMITLTGFMFLVVSALLGYIYSPHLDTAPPRWV
HLAHGLLLFLYQTFDAVDGKQARRTSSSSPLGELFDHGCDALACAFEALALGSTLMCGRFTFCFWVIAAVPFYLATWEHF
FTNTLILPLINGPTEGLMLIYLSHSFTFLTGAEWWAQDFRKSIPLLSWVPLPFIPDIPLYIIVMILMILFAVIPTIGSNV
SNVQKVVEARKGSMVLALAMLLPFIALLTGVAVWSYLSPSDIMRNQPHLLVIGTGFAFGYLVGRMILAHLCDEPKGLKTG
MCMSLVFLPFAIANALTAKINAGIPLVDELLVLFLYCAYTVGLYLHLAVSVVHEIKDALGIYCFRITRKEA*
CDS seq >Os.28668.1
ATGGGGTACATCGGGGCGCACGGGGTGGAGACGCTGAAGCGGTACAGGTACAGCGGGCAGGACCACTCGGTGGTGGCCAA
GTACGTGCTCCAGCCCTTCTGGAGCAGATGCGTCACCCTCTTCCCGCTCTGGATGCCACCTAATATGATCACACTCACTG
GATTCATGTTTCTAGTTGTATCAGCACTTCTTGGCTATATCTATTCGCCCCACCTCGACACAGCTCCCCCTAGGTGGGTC
CATCTTGCCCATGGATTACTTCTCTTCTTATACCAGACTTTTGATGCTGTTGATGGTAAACAAGCAAGGCGCACTAGCTC
ATCAAGTCCTCTAGGAGAACTTTTTGATCATGGATGTGATGCTCTTGCCTGTGCTTTTGAAGCATTAGCCCTTGGAAGCA
CCTTGATGTGTGGAAGGTTTACTTTCTGTTTCTGGGTGATTGCTGCTGTCCCGTTCTATCTTGCAACATGGGAACACTTC
TTTACAAATACACTTATTCTTCCTTTAATAAATGGACCTACGGAGGGCCTGATGCTGATATATCTATCCCACTCTTTTAC
CTTTCTTACTGGCGCTGAATGGTGGGCACAAGATTTTCGGAAGTCGATACCCCTTTTAAGTTGGGTACCCCTTCCATTTA
TTCCAGATATCCCCTTATACATTATTGTGATGATTCTTATGATCCTGTTTGCCGTAATCCCTACCATTGGATCCAATGTC
AGCAATGTCCAAAAAGTAGTTGAAGCAAGAAAAGGAAGCATGGTATTGGCATTGGCAATGCTCCTTCCTTTCATTGCATT
GTTAACTGGAGTTGCTGTCTGGTCTTACCTCTCTCCTTCAGATATTATGAGGAATCAGCCACATCTGCTTGTGATCGGAA
CTGGTTTTGCTTTTGGATATTTGGTGGGAAGGATGATACTTGCTCATTTATGTGATGAACCCAAAGGTCTCAAAACTGGA
ATGTGCATGTCTCTGGTGTTTCTTCCTTTCGCTATTGCAAATGCTCTCACAGCAAAGATCAATGCTGGGATTCCTTTAGT
TGATGAGCTGCTGGTTCTTTTCCTGTATTGCGCATACACAGTGGGCCTTTACCTGCATCTTGCCGTTTCTGTTGTGCATG
AAATCAAGGATGCTCTTGGAATCTATTGCTTCAGGATAACTAGAAAAGAGGCTTGA