
Microexon ID | Os_6:5283807-5283816:- |
Species | Oryza sativa | Coordinates | 6:5283807..5283816 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCTAATATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | CTCCAGCCCTTCTGGAGCAGATGCGTCACCCTCTTCCCGCTCTGGATGCCACCTAATATGATCACACTCACTGGATTCATGTTTCTAGTTGTATCAGCACTTCTTGGC |
Microexon-tag Amino Acid Seq | LQPFWSRCVTLFPLWMPPNMITLTGFMFLVVSALLG |
Microexon-tag spanning region | 5283684-5285839 |
Microexon-tag prediction score | 0.9683 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os06t0204400-01x |
Reference Transcript ID | Os06t0204400-01 |
Gene ID | Os06g0204400 |
Gene Name | NA |
Transcript ID | Os06t0204400-01 |
Protein ID | Os06t0204400-01 |
Gene ID | Os06g0204400 |
Gene Name | NA |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 1.5e-16 |
Motif start | 47 |
Motif end | 120 |
Protein seq | >Os06t0204400-01 MGYIGAHGVETLKRYRYSGQDHSVVAKYVLQPFWSRCVTLFPLWMPPNMITLTGFMFLVVSALLGYIYSPHLDTAPPRWV HLAHGLLLFLYQTFDAVDGKQARRTSSSSPLGELFDHGCDALACAFEALALGSTLMCGRFTFCFWVIAAVPFYLATWEHF FTNTLILPLINGPTEGLMLIYLSHSFTFLTGAEWWAQDFRKSIPLLSWVPLPFIPDIPLYIIVMILMILFAVIPTIGSNV SNVQKVVEARKGSMVLALAMLLPFIALLTGVAVWSYLSPSDIMRNQPHLLVIGTGFAFGYLVVSF* |
CDS seq | >Os06t0204400-01 ATGGGGTACATCGGGGCGCACGGGGTGGAGACGCTGAAGCGGTACAGGTACAGCGGGCAGGACCACTCGGTGGTGGCCAA GTACGTGCTCCAGCCCTTCTGGAGCAGATGCGTCACCCTCTTCCCGCTCTGGATGCCACCTAATATGATCACACTCACTG GATTCATGTTTCTAGTTGTATCAGCACTTCTTGGCTATATCTATTCGCCCCACCTCGACACAGCTCCCCCTAGGTGGGTC CATCTTGCCCATGGATTACTTCTCTTCTTATACCAGACTTTTGATGCTGTTGATGGTAAACAAGCAAGGCGCACTAGCTC ATCAAGTCCTCTAGGAGAACTTTTTGATCATGGATGTGATGCTCTTGCCTGTGCTTTTGAAGCATTAGCCCTTGGAAGCA CCTTGATGTGTGGAAGGTTTACTTTCTGTTTCTGGGTGATTGCTGCTGTCCCGTTCTATCTTGCAACATGGGAACACTTC TTTACAAATACACTTATTCTTCCTTTAATAAATGGACCTACGGAGGGCCTGATGCTGATATATCTATCCCACTCTTTTAC CTTTCTTACTGGCGCTGAATGGTGGGCACAAGATTTTCGGAAGTCGATACCCCTTTTAAGTTGGGTACCCCTTCCATTTA TTCCAGATATCCCCTTATACATTATTGTGATGATTCTTATGATCCTGTTTGCCGTAATCCCTACCATTGGATCCAATGTC AGCAATGTCCAAAAAGTAGTTGAAGCAAGAAAAGGAAGCATGGTATTGGCATTGGCAATGCTCCTTCCTTTCATTGCATT GTTAACTGGAGTTGCTGTCTGGTCTTACCTCTCTCCTTCAGATATTATGAGGAATCAGCCACATCTGCTTGTGATCGGAA CTGGTTTTGCTTTTGGATATTTGGTGGTAAGTTTTTAA |
Microexon DNA seq | ACCTAATATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | CTCCAGCCCTTCTGGAGCAGATGCGTCACCCTCTTCCCGCTCTGGATGCCACCTAATATGATCACACTCACTGGATTCATGTTTCTAGTTGTATCAGCACTTCTTGGC |
Microexon-tag Amino Acid seq | LQPFWSRCVTLFPLWMPPNMITLTGFMFLVVSALLG |
Transcript ID | Os.28668.1 |
Gene ID | Os.28668 |
Gene Name | NA |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 2.2e-16 |
Motif start | 47 |
Motif end | 120 |
Protein seq | >Os.28668.1 MGYIGAHGVETLKRYRYSGQDHSVVAKYVLQPFWSRCVTLFPLWMPPNMITLTGFMFLVVSALLGYIYSPHLDTAPPRWV HLAHGLLLFLYQTFDAVDGKQARRTSSSSPLGELFDHGCDALACAFEALALGSTLMCGRFTFCFWVIAAVPFYLATWEHF FTNTLILPLINGPTEGLMLIYLSHSFTFLTGAEWWAQDFRKSIPLLSWVPLPFIPDIPLYIIVMILMILFAVIPTIGSNV SNVQKVVEARKGSMVLALAMLLPFIALLTGVAVWSYLSPSDIMRNQPHLLVIGTGFAFGYLVGRMILAHLCDEPKGLKTG MCMSLVFLPFAIANALTAKINAGIPLVDELLVLFLYCAYTVGLYLHLAVSVVHEIKDALGIYCFRITRKEA* |
CDS seq | >Os.28668.1 ATGGGGTACATCGGGGCGCACGGGGTGGAGACGCTGAAGCGGTACAGGTACAGCGGGCAGGACCACTCGGTGGTGGCCAA GTACGTGCTCCAGCCCTTCTGGAGCAGATGCGTCACCCTCTTCCCGCTCTGGATGCCACCTAATATGATCACACTCACTG GATTCATGTTTCTAGTTGTATCAGCACTTCTTGGCTATATCTATTCGCCCCACCTCGACACAGCTCCCCCTAGGTGGGTC CATCTTGCCCATGGATTACTTCTCTTCTTATACCAGACTTTTGATGCTGTTGATGGTAAACAAGCAAGGCGCACTAGCTC ATCAAGTCCTCTAGGAGAACTTTTTGATCATGGATGTGATGCTCTTGCCTGTGCTTTTGAAGCATTAGCCCTTGGAAGCA CCTTGATGTGTGGAAGGTTTACTTTCTGTTTCTGGGTGATTGCTGCTGTCCCGTTCTATCTTGCAACATGGGAACACTTC TTTACAAATACACTTATTCTTCCTTTAATAAATGGACCTACGGAGGGCCTGATGCTGATATATCTATCCCACTCTTTTAC CTTTCTTACTGGCGCTGAATGGTGGGCACAAGATTTTCGGAAGTCGATACCCCTTTTAAGTTGGGTACCCCTTCCATTTA TTCCAGATATCCCCTTATACATTATTGTGATGATTCTTATGATCCTGTTTGCCGTAATCCCTACCATTGGATCCAATGTC AGCAATGTCCAAAAAGTAGTTGAAGCAAGAAAAGGAAGCATGGTATTGGCATTGGCAATGCTCCTTCCTTTCATTGCATT GTTAACTGGAGTTGCTGTCTGGTCTTACCTCTCTCCTTCAGATATTATGAGGAATCAGCCACATCTGCTTGTGATCGGAA CTGGTTTTGCTTTTGGATATTTGGTGGGAAGGATGATACTTGCTCATTTATGTGATGAACCCAAAGGTCTCAAAACTGGA ATGTGCATGTCTCTGGTGTTTCTTCCTTTCGCTATTGCAAATGCTCTCACAGCAAAGATCAATGCTGGGATTCCTTTAGT TGATGAGCTGCTGGTTCTTTTCCTGTATTGCGCATACACAGTGGGCCTTTACCTGCATCTTGCCGTTTCTGTTGTGCATG AAATCAAGGATGCTCTTGGAATCTATTGCTTCAGGATAACTAGAAAAGAGGCTTGA |