Microexon ID Hv_7H:70859802-70859811:-
Species Hordeum   Vulgare
Coordinates 7H:70859802..70859811
Microexon Cluster ID MEP25
Size 10
Phase 2
Pfam Domain Motif CDP-OH_P_transf
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,10,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACCAAACATG
Microexon Amino Acid seq PPNM
Microexon-tag DNA Seq CTGCAGCCCTTCTGGAGCCGCTGCGTCACCCTCTTCCCCCTCTGGATGCCACCAAACATGATCACACTCATGGGATTTATGTTTCTACTTACATCTTCGCTGCTTAGC
Microexon-tag Amino Acid Seq MQPFWSRCVTLFPLWMPPNMITLMGFMFLLTSSLLS
Microexon-tag spanning region70859670-70861109
Microexon-tag prediction score0.977
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.7HG0662670.1x
Reference Transcript ID HORVU.MOREX.r3.7HG0662670.1
Gene ID HORVU.MOREX.r3.7HG0662670
Gene Name NA
Transcript ID HORVU.MOREX.r3.7HG0662670.1
Protein ID
Gene ID HORVU.MOREX.r3.7HG0662670
Gene Name
Pfam domain motif CDP-OH_P_transf
Motif E-value 2.50E-07
Motif start 46
Motif end 150
Protein seq >HORVU.MOREX.r3.7HG0662670.1
MGYIGAHGVETLKRYRYSGQDHSVVAKYVLQPFWSRCVTLFPLWMPPNMITLMGFMFLLTSSLLSYIYSPHLDTAPPRWV
HLAHGILLFLYQTFDAVDGKQARRTSSSSPLGELFDHGCDALACAFEALALGSTLMCGRLTFCYWVVAAVPFYLATWEHY
FTNTLILPVINGPTEGLMLIYVAHLFTFFTGAEWWAQDFRKSLPLISLVPLPFVPEIPLYVIVLILMIMFAVIPTVGSNI
GNVQKVVDARKGSMELALAMLLPFIALLAGVAVWCYLSPSDIMRNQPHLLVIGTGSAFGYLVGRMILAHLCDEPKGLKTG
MCMALVFLPFAIANALTAKINNGTPLADELLVILLYCATSVGLYMHLAISVCQEIKDALGIYCFRITRKEA*
CDS seq >HORVU.MOREX.r3.7HG0662670.1
ATGGGGTACATCGGCGCGCACGGCGTGGAGACGCTGAAGCGCTACAGGTACAGCGGCCAGGACCACTCGGTGGTGGCCAA
GTACGTGCTGCAGCCCTTCTGGAGCCGCTGCGTCACCCTCTTCCCCCTCTGGATGCCACCAAACATGATCACACTCATGG
GATTTATGTTTCTACTTACATCTTCGCTGCTTAGCTATATTTATTCACCCCACCTTGACACAGCTCCCCCTCGGTGGGTC
CATCTTGCCCATGGAATACTTCTCTTCTTGTACCAGACTTTTGATGCCGTTGATGGTAAACAAGCAAGGCGCACCAGCTC
ATCAAGTCCCCTAGGAGAACTTTTTGATCATGGATGTGATGCCCTTGCCTGCGCTTTTGAAGCCTTAGCCCTTGGAAGCA
CCTTGATGTGTGGAAGGTTGACATTCTGTTACTGGGTGGTTGCTGCTGTCCCATTTTATCTGGCAACATGGGAACACTAC
TTTACAAATACTCTTATTCTTCCTGTGATAAATGGACCAACAGAAGGCCTGATGCTGATCTATGTCGCCCACCTTTTTAC
CTTTTTTACTGGTGCTGAATGGTGGGCACAAGATTTTCGGAAATCCCTCCCTCTTATTAGTTTGGTTCCACTTCCATTTG
TTCCAGAAATCCCCTTGTATGTTATCGTGCTGATTCTGATGATCATGTTTGCTGTAATCCCAACAGTTGGATCCAATATT
GGTAATGTCCAAAAGGTAGTTGATGCACGGAAAGGGAGCATGGAATTAGCATTAGCAATGCTTCTTCCGTTTATTGCGCT
GTTAGCTGGAGTTGCTGTATGGTGTTATCTCTCTCCTTCAGATATCATGAGGAACCAGCCACATTTGCTTGTGATCGGAA
CTGGTTCTGCTTTTGGATATTTGGTTGGAAGGATGATACTTGCTCATTTATGTGATGAGCCCAAAGGTCTAAAAACAGGA
ATGTGCATGGCTCTGGTGTTTCTTCCTTTTGCTATTGCAAATGCTCTCACCGCAAAGATTAACAATGGGACTCCTTTGGC
TGATGAGCTTTTGGTTATTCTTCTGTATTGTGCAACCTCAGTGGGTCTTTACATGCATCTTGCCATTTCGGTTTGCCAAG
AAATCAAGGATGCTCTTGGAATCTATTGCTTCAGGATAACCAGAAAAGAGGCTTGA
Hv_7H:70859802-70859811:- does not have available information here.