
Microexon ID | Hv_7H:70859802-70859811:- |
Species | Hordeum Vulgare | Coordinates | 7H:70859802..70859811 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCAAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | CTGCAGCCCTTCTGGAGCCGCTGCGTCACCCTCTTCCCCCTCTGGATGCCACCAAACATGATCACACTCATGGGATTTATGTTTCTACTTACATCTTCGCTGCTTAGC |
Microexon-tag Amino Acid Seq | MQPFWSRCVTLFPLWMPPNMITLMGFMFLLTSSLLS |
Microexon-tag spanning region | 70859670-70861109 |
Microexon-tag prediction score | 0.977 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.7HG0662670.1x |
Reference Transcript ID | HORVU.MOREX.r3.7HG0662670.1 |
Gene ID | HORVU.MOREX.r3.7HG0662670 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.7HG0662670.1 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.7HG0662670 |
Gene Name | |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 2.50E-07 |
Motif start | 46 |
Motif end | 150 |
Protein seq | >HORVU.MOREX.r3.7HG0662670.1 MGYIGAHGVETLKRYRYSGQDHSVVAKYVLQPFWSRCVTLFPLWMPPNMITLMGFMFLLTSSLLSYIYSPHLDTAPPRWV HLAHGILLFLYQTFDAVDGKQARRTSSSSPLGELFDHGCDALACAFEALALGSTLMCGRLTFCYWVVAAVPFYLATWEHY FTNTLILPVINGPTEGLMLIYVAHLFTFFTGAEWWAQDFRKSLPLISLVPLPFVPEIPLYVIVLILMIMFAVIPTVGSNI GNVQKVVDARKGSMELALAMLLPFIALLAGVAVWCYLSPSDIMRNQPHLLVIGTGSAFGYLVGRMILAHLCDEPKGLKTG MCMALVFLPFAIANALTAKINNGTPLADELLVILLYCATSVGLYMHLAISVCQEIKDALGIYCFRITRKEA* |
CDS seq | >HORVU.MOREX.r3.7HG0662670.1 ATGGGGTACATCGGCGCGCACGGCGTGGAGACGCTGAAGCGCTACAGGTACAGCGGCCAGGACCACTCGGTGGTGGCCAA GTACGTGCTGCAGCCCTTCTGGAGCCGCTGCGTCACCCTCTTCCCCCTCTGGATGCCACCAAACATGATCACACTCATGG GATTTATGTTTCTACTTACATCTTCGCTGCTTAGCTATATTTATTCACCCCACCTTGACACAGCTCCCCCTCGGTGGGTC CATCTTGCCCATGGAATACTTCTCTTCTTGTACCAGACTTTTGATGCCGTTGATGGTAAACAAGCAAGGCGCACCAGCTC ATCAAGTCCCCTAGGAGAACTTTTTGATCATGGATGTGATGCCCTTGCCTGCGCTTTTGAAGCCTTAGCCCTTGGAAGCA CCTTGATGTGTGGAAGGTTGACATTCTGTTACTGGGTGGTTGCTGCTGTCCCATTTTATCTGGCAACATGGGAACACTAC TTTACAAATACTCTTATTCTTCCTGTGATAAATGGACCAACAGAAGGCCTGATGCTGATCTATGTCGCCCACCTTTTTAC CTTTTTTACTGGTGCTGAATGGTGGGCACAAGATTTTCGGAAATCCCTCCCTCTTATTAGTTTGGTTCCACTTCCATTTG TTCCAGAAATCCCCTTGTATGTTATCGTGCTGATTCTGATGATCATGTTTGCTGTAATCCCAACAGTTGGATCCAATATT GGTAATGTCCAAAAGGTAGTTGATGCACGGAAAGGGAGCATGGAATTAGCATTAGCAATGCTTCTTCCGTTTATTGCGCT GTTAGCTGGAGTTGCTGTATGGTGTTATCTCTCTCCTTCAGATATCATGAGGAACCAGCCACATTTGCTTGTGATCGGAA CTGGTTCTGCTTTTGGATATTTGGTTGGAAGGATGATACTTGCTCATTTATGTGATGAGCCCAAAGGTCTAAAAACAGGA ATGTGCATGGCTCTGGTGTTTCTTCCTTTTGCTATTGCAAATGCTCTCACCGCAAAGATTAACAATGGGACTCCTTTGGC TGATGAGCTTTTGGTTATTCTTCTGTATTGTGCAACCTCAGTGGGTCTTTACATGCATCTTGCCATTTCGGTTTGCCAAG AAATCAAGGATGCTCTTGGAATCTATTGCTTCAGGATAACCAGAAAAGAGGCTTGA |
Hv_7H:70859802-70859811:- does not have available information here.