
Microexon ID | Ha_11:4088534-4088543:- |
Species | Helianthus annuus | Coordinates | 11:4088534..4088543 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCCAATATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | TTGCAACCGTTTTGGAGTCGATTTGTTACGTTCTTTCCTCTTTGGATGCCACCCAATATGATTACGCTAACAGGATTCATGTTCTTGCTCATATCTGCATCACTTGGC |
Microexon-tag Amino Acid Seq | MQPFWSRFVTFFPLWMPPNMITLTGFMFLLISASLG |
Microexon-tag spanning region | 4088398-4088734 |
Microexon-tag prediction score | 0.9678 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG06619x |
Reference Transcript ID | OTG06619 |
Gene ID | HannXRQ_Chr11g0321311 |
Gene Name | AAPT1 |
Transcript ID | OTG06619 |
Protein ID | OTG06619 |
Gene ID | HannXRQ_Chr11g0321311 |
Gene Name | AAPT1 |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 2.7e-16 |
Motif start | 47 |
Motif end | 120 |
Protein seq | >OTG06619 MGYIGVHGINALHRYKYSGVDHSYVAKYVLQPFWSRFVTFFPLWMPPNMITLTGFMFLLISASLGYIYSPQLDSPPPRWV HFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALTCALEALAFGSTAMCGRYTFWFWVISAVPFYGATWEHY FTNTLILPAVNGPTEGLMLIYVAHFFTGVVGAEWWAQDVGKSIPLLGWVPFIDGIPTYGAVLFFMIVFAVIPTLTFNVQN VYKVVRMRHGSMLKALAMLVPFGVLLAVVLLWDYMSPYDLIGKYPHMVVMGIGLAFGFLVGRMILAHLCDEPKGLKTSMS MSLFYLPLAIANALTAWLNEGVPLVDDKWVLLGFCLYTGALYLHFATSVIHEITTALGIYCFRITRKEA* |
CDS seq | >OTG06619 ATGGGATATATAGGTGTTCATGGCATTAATGCACTGCATAGATACAAATACAGTGGAGTTGATCACTCTTATGTTGCAAA ATATGTCTTGCAACCGTTTTGGAGTCGATTTGTTACGTTCTTTCCTCTTTGGATGCCACCCAATATGATTACGCTAACAG GATTCATGTTCTTGCTCATATCTGCATCACTTGGCTATATATATTCACCTCAATTGGATTCACCTCCTCCAAGATGGGTT CACTTTGCTCATGGATTACTCCTCTTCTTGTACCAGACTTTTGATGCTGTTGACGGAAAGCAAGCTAGAAGAACAAACTC ATCTAGTCCATTGGGAGAACTTTTTGATCATGGATGTGATGCACTTACTTGTGCGTTGGAGGCATTGGCTTTTGGAAGCA CTGCGATGTGCGGAAGATACACGTTCTGGTTTTGGGTCATTTCAGCGGTTCCGTTCTATGGAGCAACTTGGGAACATTAT TTTACCAACACGTTAATCCTTCCGGCCGTAAATGGACCTACGGAGGGTCTCATGCTAATATACGTGGCACACTTCTTTAC CGGTGTAGTTGGTGCAGAGTGGTGGGCGCAAGATGTTGGGAAGTCTATTCCTCTTCTTGGCTGGGTTCCATTTATAGATG GAATCCCTACCTATGGAGCAGTTTTATTTTTCATGATAGTTTTTGCCGTTATACCAACACTCACATTTAATGTGCAAAAT GTTTATAAGGTTGTACGCATGAGACACGGAAGCATGCTAAAGGCCTTGGCTATGCTTGTCCCGTTTGGTGTACTGTTGGC GGTAGTTCTGCTATGGGATTATATGTCTCCATATGATTTAATTGGGAAATACCCGCATATGGTTGTTATGGGAATTGGAC TAGCATTTGGATTCCTTGTGGGAAGGATGATATTGGCCCACTTGTGTGACGAGCCTAAAGGGTTGAAAACTAGTATGTCC ATGTCCCTGTTCTATCTCCCACTCGCGATTGCAAATGCACTCACTGCGTGGTTAAATGAGGGAGTTCCCCTAGTTGATGA TAAATGGGTTCTTCTCGGCTTCTGTCTATACACTGGTGCACTGTATCTACACTTTGCTACATCGGTCATTCACGAAATAA CAACAGCTCTTGGAATTTATTGTTTCCGGATCACAAGAAAAGAGGCATGA |
Microexon DNA seq | ACCCAATATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | TTGCAACCGTTTTGGAGTCGATTTGTTACGTTCTTTCCTCTTTGGATGCCACCCAATATGATTACGCTAACAGGATTCATGTTCTTGCTCATATCTGCATCACTTGGC |
Microexon-tag Amino Acid seq | MQPFWSRFVTFFPLWMPPNMITLTGFMFLLISASLG |
Transcript ID | Ha.7627.1 |
Gene ID | Ha.7627 |
Gene Name | AAPT1 |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 2.7e-16 |
Motif start | 47 |
Motif end | 120 |
Protein seq | >Ha.7627.1 MGYIGVHGINALHRYKYSGVDHSYVAKYVLQPFWSRFVTFFPLWMPPNMITLTGFMFLLISASLGYIYSPQLDSPPPRWV HFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALTCALEALAFGSTAMCGRYTFWFWVISAVPFYGATWEHY FTNTLILPAVNGPTEGLMLIYVAHFFTGVVGAEWWAQDVGKSIPLLGWVPFIDGIPTYGAVLFFMIVFAVIPTLTFNVQN VYKVVRMRHGSMLKALAMLVPFGVLLAVVLLWDYMSPYDLIGKYPHMVVMGIGLAFGFLVGRMILAHLCDEPKGLKTSMS MSLFYLPLAIANALTAWLNEGVPLVDDKWVLLGFCLYTGALYLHFATSVIHEITTALGIYCFRITRKEA* |
CDS seq | >Ha.7627.1 ATGGGATATATAGGTGTTCATGGCATTAATGCACTGCATAGATACAAATACAGTGGAGTTGATCACTCTTATGTTGCAAA ATATGTCTTGCAACCGTTTTGGAGTCGATTTGTTACGTTCTTTCCTCTTTGGATGCCACCCAATATGATTACGCTAACAG GATTCATGTTCTTGCTCATATCTGCATCACTTGGCTATATATATTCACCTCAATTGGATTCACCTCCTCCAAGATGGGTT CACTTTGCTCATGGATTACTCCTCTTCTTGTACCAGACTTTTGATGCTGTTGACGGAAAGCAAGCTAGAAGAACAAACTC ATCTAGTCCATTGGGAGAACTTTTTGATCATGGATGTGATGCACTTACTTGTGCGTTGGAGGCATTGGCTTTTGGAAGCA CTGCGATGTGCGGAAGATACACGTTCTGGTTTTGGGTCATTTCAGCGGTTCCGTTCTATGGAGCAACTTGGGAACATTAT TTTACCAACACGTTAATCCTTCCGGCCGTAAATGGACCTACGGAGGGTCTCATGCTAATATACGTGGCACACTTCTTTAC CGGTGTAGTTGGTGCAGAGTGGTGGGCGCAAGATGTTGGGAAGTCTATTCCTCTTCTTGGCTGGGTTCCATTTATAGATG GAATCCCTACCTATGGAGCAGTTTTATTTTTCATGATAGTTTTTGCCGTTATACCAACACTCACATTTAATGTGCAAAAT GTTTATAAGGTTGTACGCATGAGACACGGAAGCATGCTAAAGGCCTTGGCTATGCTTGTCCCGTTTGGTGTACTGTTGGC GGTAGTTCTGCTATGGGATTATATGTCTCCATATGATTTAATTGGGAAATACCCGCATATGGTTGTTATGGGAATTGGAC TAGCATTTGGATTCCTTGTGGGAAGGATGATATTGGCCCACTTGTGTGACGAGCCTAAAGGGTTGAAAACTAGTATGTCC ATGTCCCTGTTCTATCTCCCACTCGCGATTGCAAATGCACTCACTGCGTGGTTAAATGAGGGAGTTCCCCTAGTTGATGA TAAATGGGTTCTTCTCGGCTTCTGTCTATACACTGGTGCACTGTATCTACACTTTGCTACATCGGTCATTCACGAAATAA CAACAGCTCTTGGAATTTATTGTTTCCGGATCACAAGAAAAGAGGCATGA |