| Microexon ID | Bn_scaffoldC07:43210186-43210195:+ |
| Species | Brassica Napus | Coordinates | scaffoldC07:43210186..43210195 |
| Microexon Cluster ID | MEP25 |
| Size | 10 |
| Phase | 2 |
| Pfam Domain Motif | CDP-OH_P_transf |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ACCCAACATG |
| Microexon Amino Acid seq | PPNM |
| Microexon-tag DNA Seq | CTCCAACCTTTTTGGAATCGTTTTGTCAAAATCTTCCCTCTCTGGATGCCACCCAACATGATAACACTTACGGGGTTCATGTTTCTCATCATATCTGCGCTCTTAGGC |
| Microexon-tag Amino Acid Seq | LQPFWNRFVKIFPLWMPPNMITLTGFMFLIISALLG |
| Microexon-tag spanning region | 43209998-43210324 |
| Microexon-tag prediction score | 0.9595 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC07T0288600ZSx |
| Reference Transcript ID | BnaC07T0288600ZS |
| Gene ID | BnaC07G0288600ZS |
| Gene Name | NA |
| Transcript ID | BnaC07T0288600ZS |
| Protein ID | |
| Gene ID | BnaC07G0288600ZS |
| Gene Name | |
| Pfam domain motif | CDP-OH_P_transf |
| Motif E-value | 5.40E-07 |
| Motif start | 46 |
| Motif end | 117 |
| Protein seq | >BnaC07T0288600ZS MGYIGAHGVAALHRHKYSGVDHSYLAKYVLQPFWNRFVKIFPLWMPPNMITLTGFMFLIISALLGYVYSPRLDSPPPRWV HLAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHAYLFNFCNKQFETMAYGSTAMCGRDTFWFWIISAIPFIGSTWE TYFTNILTLPVVNGPTEGLALIYCGHFFTAIVGAEWWAQQFGESIPLFSWVPFLNEITTSRVVLITMVAFAVIPTLAFSV SNVYKVIQPRKGSMFVALSMLFPFVGLLAGVLIWDYLSPTDLIRNYPHLVVLGTGLAFGFIVGRIILAHICDEPKGLKTN MCMSLLYLPFALANALTARLNNGVALVDEFWVLLGYCIFTMALYMHFATSVIHEITTALGIYCFRFV* |
| CDS seq | >BnaC07T0288600ZS ATGGGATACATAGGAGCACATGGGGTAGCAGCTCTTCATAGACACAAATACAGTGGTGTGGATCACTCTTACCTTGCCAA ATACGTTCTCCAACCTTTTTGGAATCGTTTTGTCAAAATCTTCCCTCTCTGGATGCCACCCAACATGATAACACTTACGG GGTTCATGTTTCTCATCATATCTGCGCTCTTAGGCTATGTATACTCACCTCGGTTGGATTCTCCTCCTCCTCGATGGGTT CACTTGGCACATGGACTCCTTCTGTTTTTGTATCAGACATTTGATGCGGTTGATGGAAAGCAAGCACGAAGAACAAACTC CAGTAGCCCACTCGGAGAGCTCTTTGATCATGCTTATTTATTCAATTTCTGCAATAAACAGTTTGAAACGATGGCATATG GGAGTACTGCTATGTGTGGAAGAGATACTTTCTGGTTCTGGATTATATCAGCTATTCCATTTATTGGATCTACATGGGAA ACCTATTTTACCAATATACTGACTCTCCCGGTAGTCAATGGTCCTACAGAAGGTCTTGCACTTATATACTGTGGTCACTT CTTCACAGCCATTGTTGGTGCTGAATGGTGGGCTCAGCAGTTTGGAGAGTCAATCCCCTTGTTTAGTTGGGTGCCCTTCT TGAACGAGATTACAACATCAAGAGTAGTACTAATAACGATGGTTGCTTTTGCTGTTATACCAACACTTGCATTCAGCGTG TCCAATGTATACAAAGTTATACAGCCAAGAAAAGGAAGCATGTTTGTAGCATTATCTATGCTGTTTCCATTCGTTGGGCT ACTTGCAGGAGTTTTGATTTGGGACTACTTGTCTCCAACTGATCTCATAAGAAACTACCCTCACTTAGTTGTACTGGGAA CTGGTCTTGCATTTGGATTCATTGTGGGAAGAATAATTTTAGCTCACATATGTGATGAACCAAAAGGATTAAAAACAAAC ATGTGCATGTCACTGCTTTACCTTCCCTTTGCACTAGCAAATGCTCTAACCGCTAGACTCAACAACGGGGTTGCTCTAGT GGATGAGTTTTGGGTGCTTCTTGGTTATTGTATATTCACAATGGCACTATACATGCATTTTGCAACCTCAGTCATTCATG AAATCACTACTGCACTTGGAATCTACTGCTTCAGGTTTGTATAA |
Bn_scaffoldC07:43210186-43210195:+ does not have available information here.