| Microexon ID | Bn_scaffoldC02:55172637-55172646:+ |
| Species | Brassica Napus | Coordinates | scaffoldC02:55172637..55172646 |
| Microexon Cluster ID | MEP25 |
| Size | 10 |
| Phase | 2 |
| Pfam Domain Motif | CDP-OH_P_transf |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GCCTAACATG |
| Microexon Amino Acid seq | PPNM |
| Microexon-tag DNA Seq | CTCAACCCTTTTTGGACTCGTTTAGTCAACATCTTCCCTCTTTGGATGCCGCCTAACATGATAACACTCATGGGGTTCATGTTTCTTGTCACATCTGCGCTGTTAGGC |
| Microexon-tag Amino Acid Seq | LNPFWTRLVNIFPLWMPPNMITLMGFMFLVTSALLG |
| Microexon-tag spanning region | 55172456-55172768 |
| Microexon-tag prediction score | 0.9568 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC02T0446700ZSx |
| Reference Transcript ID | BnaC02T0446700ZS |
| Gene ID | BnaC02G0446700ZS |
| Gene Name | NA |
| Transcript ID | BnaC02T0446700ZS |
| Protein ID | |
| Gene ID | BnaC02G0446700ZS |
| Gene Name | |
| Pfam domain motif | CDP-OH_P_transf |
| Motif E-value | 3.00E-08 |
| Motif start | 46 |
| Motif end | 150 |
| Protein seq | >BnaC02T0446700ZS MGYIGAHGVAALHRYKYSGVDHSYLYKYLLNPFWTRLVNIFPLWMPPNMITLMGFMFLVTSALLGYVYSPLLDSPPPRWV HFAHGLLLFLYQTFDGLDGKQARRTSSSSPLGELFDHGCDALACAFETMAYGSTAMCGRDTFWFWVIAAVPFFGATWEHY FTNTLILPVVNGPTEGLALIYCGHFFTAFVGAEWWAQQFGKSIPLLSWVPFLNEIQMSRVVLFSMIVFAVIPTVAFNVYN VYKVVHTRKGSMLLALAMLYPFAVLLAGVLTWDYLSPIDLIGNYPHLVVLGTGLAFGFLVGRMILAHLCDEPKGLKTNMC LSLLYLPFALANALTARLNDGDPLVDEFWVLLGYCIFTMALYLHFATSVIHEITTALGIYCFRITRKEA* |
| CDS seq | >BnaC02T0446700ZS ATGGGTTACATAGGAGCACATGGTGTAGCAGCTCTTCATAGATACAAATACAGTGGTGTGGATCACTCTTATCTTTACAA ATACCTTCTCAACCCTTTTTGGACTCGTTTAGTCAACATCTTCCCTCTTTGGATGCCGCCTAACATGATAACACTCATGG GGTTCATGTTTCTTGTCACATCTGCGCTGTTAGGCTATGTATACTCGCCTCTGTTGGATTCTCCTCCTCCTCGATGGGTT CACTTCGCACATGGACTGCTTCTGTTTTTGTATCAGACATTTGATGGTTTGGATGGGAAGCAAGCACGAAGAACAAGCTC CTCTAGCCCACTAGGAGAGCTTTTTGATCATGGTTGTGATGCACTTGCTTGTGCGTTTGAAACAATGGCATATGGAAGCA CTGCTATGTGTGGAAGAGATACTTTCTGGTTTTGGGTTATTGCAGCTGTTCCTTTCTTTGGAGCAACGTGGGAACACTAT TTCACCAATACACTTATTCTTCCGGTAGTCAATGGTCCTACAGAAGGTCTTGCACTTATATACTGTGGCCACTTCTTCAC AGCCTTTGTTGGTGCTGAATGGTGGGCTCAGCAGTTTGGGAAGTCGATTCCTTTATTGAGTTGGGTGCCGTTTTTGAACG AGATTCAAATGTCCAGAGTAGTACTATTCTCAATGATTGTTTTTGCTGTTATACCAACCGTTGCATTCAACGTGTATAAT GTGTACAAAGTTGTGCACACAAGAAAAGGAAGCATGCTTCTAGCATTAGCTATGCTATATCCCTTCGCCGTCCTACTTGC AGGAGTTTTGACTTGGGATTACTTGTCTCCAATTGATCTCATAGGAAACTATCCTCACTTAGTTGTATTAGGAACTGGTC TTGCTTTTGGATTCCTTGTGGGAAGAATGATTCTAGCTCACTTATGTGATGAGCCAAAAGGATTAAAAACAAACATGTGT CTGTCACTGCTTTACCTTCCCTTTGCACTAGCGAATGCTCTAACTGCTAGACTCAACGACGGGGATCCTCTTGTGGATGA GTTTTGGGTTCTTCTTGGTTATTGTATATTCACGATGGCACTATATTTGCATTTTGCAACTTCAGTCATTCATGAGATCA CTACTGCACTTGGAATCTACTGCTTCAGGATTACGCGCAAAGAAGCTTGA |
Bn_scaffoldC02:55172637-55172646:+ does not have available information here.