
Microexon ID | At_1:4641419-4641428:- |
Species | Arabidopsis thaliana | Coordinates | 1:4641419..4641428 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCAAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | CTCCAACCTTTTTGGACTCGATTTGTCAAAGTCTTCCCTCTATGGATGCCACCAAACATGATAACGCTTATGGGGTTTATGTTTCTAGTCACTTCCTCCCTGCTAGGC |
Microexon-tag Amino Acid Seq | LQPFWTRFVKVFPLWMPPNMITLMGFMFLVTSSLLG |
Microexon-tag spanning region | 4641279-4641604 |
Microexon-tag prediction score | 0.9664 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT1G13560.1x |
Reference Transcript ID | AT1G13560.1 |
Gene ID | AT1G13560 |
Gene Name | AAPT1 |
Transcript ID | AT1G13560.1 |
Protein ID | AT1G13560.1 |
Gene ID | AT1G13560 |
Gene Name | AAPT1 |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 9e-17 |
Motif start | 47 |
Motif end | 120 |
Protein seq | >AT1G13560.1 MGYIGAHGVAALHRYKYSGVDHSYLAKYVLQPFWTRFVKVFPLWMPPNMITLMGFMFLVTSSLLGYIYSPQLDSPPPRWV HFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFEAMAFGSTAMCGRDTFWFWVISAIPFYGATWEHY FTNTLILPVINGPTEGLALIFVSHFFTAIVGAEWWAQQLGQSIPLFSWVPFVNEIQTSRAVLYMMIAFAVIPTVAFNVTN VYKVVRSRNGSMVLALAMLYPFVVLLGGVLIWDYLSPINLIATYPHLVVLGTGLAFGFLVGRMILAHLCDEPKGLKTNMC MSLLYLPFALANALTARLNAGVPLVDELWVLLGYCIFTVSLYLHFATSVIHEITEALGIYCFRITRKEA* |
CDS seq | >AT1G13560.1 ATGGGTTACATAGGAGCTCATGGTGTAGCAGCTCTTCATAGGTACAAATACAGTGGAGTGGATCACTCTTATCTTGCCAA ATACGTCCTCCAACCTTTTTGGACTCGATTTGTCAAAGTCTTCCCTCTATGGATGCCACCAAACATGATAACGCTTATGG GGTTTATGTTTCTAGTCACTTCCTCCCTGCTAGGCTATATATATTCACCTCAGTTGGATTCTCCTCCTCCACGATGGGTT CACTTCGCACATGGTTTACTTCTCTTCTTGTATCAGACATTTGATGCGGTTGATGGGAAGCAAGCAAGAAGGACAAATTC CTCTAGCCCCCTAGGAGAGCTCTTCGATCATGGTTGTGACGCGCTTGCTTGTGCGTTTGAAGCCATGGCATTTGGAAGCA CTGCAATGTGTGGAAGAGATACTTTCTGGTTCTGGGTTATTTCAGCTATTCCATTTTATGGAGCTACATGGGAACACTAT TTCACCAACACACTTATTCTTCCGGTTATCAATGGGCCTACAGAGGGGCTTGCACTTATATTTGTCAGCCACTTCTTCAC AGCCATCGTCGGTGCTGAATGGTGGGCTCAGCAGTTAGGGCAGTCAATACCATTGTTTAGTTGGGTGCCATTTGTGAATG AGATTCAAACTTCTAGAGCAGTGCTATACATGATGATCGCTTTTGCTGTTATACCAACCGTTGCATTCAATGTAACAAAT GTCTACAAAGTCGTTCGATCAAGAAACGGGAGCATGGTGTTAGCGTTAGCTATGCTGTATCCCTTCGTTGTCTTACTTGG AGGAGTTTTGATATGGGATTACTTGTCTCCAATCAATCTCATAGCAACATATCCTCACTTAGTTGTACTCGGAACTGGAC TTGCATTTGGATTTTTAGTGGGAAGAATGATTCTTGCTCACTTGTGTGATGAGCCTAAAGGACTAAAAACAAACATGTGC ATGTCACTACTCTATCTTCCCTTTGCACTTGCAAATGCGCTAACCGCAAGATTGAATGCTGGGGTTCCTCTAGTCGACGA ATTATGGGTTCTTCTTGGCTACTGCATATTCACAGTGTCATTATACTTGCACTTTGCAACATCAGTCATCCATGAGATCA CTGAGGCCCTTGGAATCTACTGCTTTAGGATCACGCGTAAAGAAGCTTGA |
Microexon DNA seq | ACCAAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | CTCCAACCTTTTTGGACTCGATTTGTCAAAGTCTTCCCTCTATGGATGCCACCAAACATGATAACGCTTATGGGGTTTATGTTTCTAGTCACTTCCTCCCTGCTAGGC |
Microexon-tag Amino Acid seq | LQPFWTRFVKVFPLWMPPNMITLMGFMFLVTSSLLG |
Transcript ID | AT1G13560.1 |
Gene ID | At.1426 |
Gene Name | AAPT1 |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 9e-17 |
Motif start | 47 |
Motif end | 120 |
Protein seq | >AT1G13560.1 MGYIGAHGVAALHRYKYSGVDHSYLAKYVLQPFWTRFVKVFPLWMPPNMITLMGFMFLVTSSLLGYIYSPQLDSPPPRWV HFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFEAMAFGSTAMCGRDTFWFWVISAIPFYGATWEHY FTNTLILPVINGPTEGLALIFVSHFFTAIVGAEWWAQQLGQSIPLFSWVPFVNEIQTSRAVLYMMIAFAVIPTVAFNVTN VYKVVRSRNGSMVLALAMLYPFVVLLGGVLIWDYLSPINLIATYPHLVVLGTGLAFGFLVGRMILAHLCDEPKGLKTNMC MSLLYLPFALANALTARLNAGVPLVDELWVLLGYCIFTVSLYLHFATSVIHEITEALGIYCFRITRKEA* |
CDS seq | >AT1G13560.1 ATGGGTTACATAGGAGCTCATGGTGTAGCAGCTCTTCATAGGTACAAATACAGTGGAGTGGATCACTCTTATCTTGCCAA ATACGTCCTCCAACCTTTTTGGACTCGATTTGTCAAAGTCTTCCCTCTATGGATGCCACCAAACATGATAACGCTTATGG GGTTTATGTTTCTAGTCACTTCCTCCCTGCTAGGCTATATATATTCACCTCAGTTGGATTCTCCTCCTCCACGATGGGTT CACTTCGCACATGGTTTACTTCTCTTCTTGTATCAGACATTTGATGCGGTTGATGGGAAGCAAGCAAGAAGGACAAATTC CTCTAGCCCCCTAGGAGAGCTCTTCGATCATGGTTGTGACGCGCTTGCTTGTGCGTTTGAAGCCATGGCATTTGGAAGCA CTGCAATGTGTGGAAGAGATACTTTCTGGTTCTGGGTTATTTCAGCTATTCCATTTTATGGAGCTACATGGGAACACTAT TTCACCAACACACTTATTCTTCCGGTTATCAATGGGCCTACAGAGGGGCTTGCACTTATATTTGTCAGCCACTTCTTCAC AGCCATCGTCGGTGCTGAATGGTGGGCTCAGCAGTTAGGGCAGTCAATACCATTGTTTAGTTGGGTGCCATTTGTGAATG AGATTCAAACTTCTAGAGCAGTGCTATACATGATGATCGCTTTTGCTGTTATACCAACCGTTGCATTCAATGTAACAAAT GTCTACAAAGTCGTTCGATCAAGAAACGGGAGCATGGTGTTAGCGTTAGCTATGCTGTATCCCTTCGTTGTCTTACTTGG AGGAGTTTTGATATGGGATTACTTGTCTCCAATCAATCTCATAGCAACATATCCTCACTTAGTTGTACTCGGAACTGGAC TTGCATTTGGATTTTTAGTGGGAAGAATGATTCTTGCTCACTTGTGTGATGAGCCTAAAGGACTAAAAACAAACATGTGC ATGTCACTACTCTATCTTCCCTTTGCACTTGCAAATGCGCTAACCGCAAGATTGAATGCTGGGGTTCCTCTAGTCGACGA ATTATGGGTTCTTCTTGGCTACTGCATATTCACAGTGTCATTATACTTGCACTTTGCAACATCAGTCATCCATGAGATCA CTGAGGCCCTTGGAATCTACTGCTTTAGGATCACGCGTAAAGAAGCTTGA |