Microexon ID Zm_4:64875021-64875030:-
Species Zea mays
Coordinates 4:64875021..64875030
Microexon Cluster ID MEP24
Size 10
Phase 1
Pfam Domain Motif Ham1p_like
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,10,32,17
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTKGTKGARGAYACTTGYCTCTGYTTCAATGCMYTCAARGGTCTTCCAGGGCCYTACATMAARTGGTTTCTGSAGAAGATTGGTCATGAAGGTYTGAACAAYTTGYTR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GACCCTACAT
Microexon Amino Acid seq GPYI
Microexon-tag DNA Seq CTGGTGGAGGACACCTGCTTATGTTTTAATGCGCTCAAAGGCCTACCAGGACCCTACATAAAGTGGTTTCTTGAGAAGATTGGGCATGAAGGTTTAAATAATCTGTTA
Microexon-tag Amino Acid Seq MVEDTCLCFNALKGLPGPYIKWFLEKIGHEGLNNLL
Microexon-tag spanning region64874709-64875161
Microexon-tag prediction score0.9694
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d050084_T001x
Reference Transcript ID Zm00001d050084_T001
Gene ID Zm00001d050084
Gene Name NA
Transcript ID Zm00001d050084_T001
Protein ID Zm00001d050084_P001
Gene ID Zm00001d050084
Gene Name NA
Pfam domain motif Ham1p_like
Motif E-value 6.8e-45
Motif start 74
Motif end 227
Protein seq >Zm00001d050084_P001
MLASEFPLLLNNRSSLPRLVTLCDQTPSTPFDVVRNVVEKQLGKNFDDMFEFFDVEPVGSASIAQVHRAKLKLSKTYVAV
KAVPELQGEPEYISKEKARIAASQVNGHVLVEDTCLCFNALKGLPGPYIKWFLEKIGHEGLNNLLNSYEDKSVFAMCIFS
LALGHGEEPITFVGKTAGKIVPARGPNDFGWDPVFQPDGFEQTYAEMPKSVKNQISHRGKALALVKEHFASASYTVQSDD
SA*
CDS seq >Zm00001d050084_T001
ATGCTAGCATCGGAGTTCCCTCTACTGCTGAACAATCGTTCTTCATTACCAAGACTTGTTACACTATGTGATCAAACCCC
ATCCACGCCATTTGATGTGGTTAGAAATGTTGTGGAGAAACAGTTGGGGAAGAACTTCGATGACATGTTTGAATTCTTCG
ATGTCGAGCCTGTTGGGTCTGCTTCTATTGCACAGGTGCATCGAGCAAAGCTTAAATTATCAAAGACATATGTTGCTGTC
AAGGCAGTGCCTGAACTGCAAGGGGAGCCAGAGTACATATCCAAAGAGAAAGCACGAATCGCTGCATCTCAGGTGAATGG
GCATGTACTGGTGGAGGACACCTGCTTATGTTTTAATGCGCTCAAAGGCCTACCAGGACCCTACATAAAGTGGTTTCTTG
AGAAGATTGGGCATGAAGGTTTAAATAATCTGTTAAACTCTTATGAAGATAAATCAGTGTTCGCTATGTGCATCTTCTCT
CTTGCTCTTGGACATGGAGAGGAACCAATCACATTTGTTGGCAAAACTGCGGGAAAGATCGTGCCTGCTAGAGGCCCTAA
CGATTTTGGGTGGGATCCTGTGTTCCAGCCAGATGGTTTTGAACAAACATATGCTGAGATGCCCAAGTCAGTGAAGAACC
AAATATCTCATAGAGGGAAAGCTCTTGCTCTGGTGAAAGAACACTTCGCATCTGCTAGCTATACAGTTCAGAGCGACGAC
TCAGCTTAA
Microexon DNA seq NA
Microexon Amino Acid seq NA
Microexon-tag DNA Seq NA
Microexon-tag Amino Acid seq NA
Transcript ID Zm00001d050084_T001
Gene ID Zm00001d050084
Gene Name NA
Pfam domain motif NA
Motif E-value NA
Motif start NA
Motif end NA
Protein seq
CDS seq