| Microexon ID | Pt_3:18277531-18277540:+ |
| Species | Populus Trichocarpa | Coordinates | 3:18277531..18277540 |
| Microexon Cluster ID | MEP24 |
| Size | 10 |
| Phase | 1 |
| Pfam Domain Motif | Ham1p_like |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,10,32,17 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YTKGTKGARGAYACTTGYCTCTGYTTCAATGCMYTCAARGGTCTTCCAGGGCCYTACATMAARTGGTTTCTGSAGAAGATTGGTCATGAAGGTYTGAACAAYTTGYTR |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GGCCATACAT |
| Microexon Amino Acid seq | GPYI |
| Microexon-tag DNA Seq | TTGGTGGAGGATACTTGTCTTTGCTTCAATGCCTTGAAGGGTCTTCCAGGGCCATACATCAAGTGGTTTCTGCAAAAGATTGGTCATGAAGGTCTGAACAACTTGCTG |
| Microexon-tag Amino Acid Seq | MVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLL |
| Microexon-tag spanning region | 18277384-18278850 |
| Microexon-tag prediction score | 0.983 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.003G175800.1.v4.1x |
| Reference Transcript ID | Potri.003G175800.1.v4.1 |
| Gene ID | Potri.003G175800.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.003G175800.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.003G175800.v4.1 |
| Gene Name | |
| Pfam domain motif | Ham1p_like |
| Motif E-value | 3.20E-52 |
| Motif start | 18 |
| Motif end | 191 |
| Protein seq | >Potri.003G175800.1.v4.1 MEMAAAKAASGVVVSRPLTFVTGNAKKLEEVRAILGQTVPFQSLKLDLPELQGEPEEISKEKARLAAVEVKGPVLVEDTC LCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCAYSFALGPDAEPITFLGKTLGKIVAARGPNDFGWDSIF QPDGYEQTYAEMPKDEKNKISHRSRALDLVKSHFAEAGYIFETNDSKKSEL* |
| CDS seq | >Potri.003G175800.1.v4.1 ATGGAAATGGCGGCGGCAAAAGCAGCGTCTGGGGTGGTGGTGTCACGGCCGCTGACATTCGTGACCGGAAACGCAAAGAA GCTTGAAGAAGTCCGTGCAATCTTGGGCCAAACCGTTCCTTTCCAATCTCTCAAACTTGACCTACCCGAGCTGCAAGGAG AACCTGAAGAAATCTCTAAAGAGAAAGCTCGTTTAGCTGCCGTAGAGGTGAAAGGGCCTGTTTTGGTGGAGGATACTTGT CTTTGCTTCAATGCCTTGAAGGGTCTTCCAGGGCCATACATCAAGTGGTTTCTGCAAAAGATTGGTCATGAAGGTCTGAA CAACTTGCTGATGGCATATGAGGACAAATCAGCCTATGCTTTATGTGCATATTCTTTTGCTCTTGGGCCTGATGCTGAAC CAATTACATTTCTTGGAAAAACTCTGGGGAAGATAGTTGCAGCGAGGGGACCTAATGATTTTGGATGGGATTCAATCTTT CAACCTGATGGCTATGAGCAAACTTATGCAGAGATGCCAAAGGATGAAAAGAACAAGATTTCTCACCGTTCCAGGGCTCT TGATTTGGTTAAATCCCACTTTGCTGAAGCTGGATACATTTTCGAGACAAATGACTCTAAAAAGAGTGAGCTATAG |
Pt_3:18277531-18277540:+ does not have available information here.