Microexon ID Os_10:16770493-16770502:-
Species Oryza sativa
Coordinates 10:16770493..16770502
Microexon Cluster ID MEP24
Size 10
Phase 1
Pfam Domain Motif Ham1p_like
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,10,32,17
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTKGTKGARGAYACTTGYCTCTGYTTCAATGCMYTCAARGGTCTTCCAGGGCCYTACATMAARTGGTTTCTGSAGAAGATTGGTCATGAAGGTYTGAACAAYTTGYTR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGCCCTACAT
Microexon Amino Acid seq GPYI
Microexon-tag DNA Seq CTTGTTGAGGACACCTGCCTATGCTTCAATGCACTCAAAGGCTTACCAGGGCCCTACATAAAATGGTTCCTTGAGAAAACTGGGCATGAAGGTTTGAACAATTTGTTG
Microexon-tag Amino Acid Seq LVEDTCLCFNALKGLPGPYIKWFLEKTGHEGLNNLL
Microexon-tag spanning region16770122-16770636
Microexon-tag prediction score0.9725
Overlapped with the annotated transcript (%) 100
New Transcript ID Os10t0457500-01x
Reference Transcript ID Os10t0457500-01
Gene ID Os10g0457500
Gene Name NA
Transcript ID Os10t0457500-01
Protein ID Os10t0457500-01
Gene ID Os10g0457500
Gene Name NA
Pfam domain motif Ham1p_like
Motif E-value 7.2e-53
Motif start 16
Motif end 190
Protein seq >Os10t0457500-01
MSGAAAAAARALPKAVTFVTGNAKKLEEVRAILGSSIPFQSLKLDLPELQGEPEDISKEKARMAASQVNGPVLVEDTCLC
FNALKGLPGPYIKWFLEKTGHEGLNNLLLAYEDKSAFAMCIFSLALGPGEEPMTFVGKTAGKIVPARGPADFGWDPVFQP
DGFDQTYAEMPKSVKNQISHRGKALALVKEHFAAANYKVQNDGSA*
CDS seq >Os10t0457500-01
ATGTCCGGGGCGGCGGCGGCGGCGGCGCGGGCGCTGCCCAAGGCGGTGACCTTCGTGACGGGCAACGCCAAGAAGCTGGA
GGAAGTCCGCGCCATCCTCGGCTCCTCCATCCCCTTCCAGTCCCTCAAGCTCGACCTCCCTGAATTGCAAGGTGAGCCGG
AGGACATATCTAAAGAGAAAGCACGAATGGCTGCATCCCAGGTGAATGGGCCTGTACTTGTTGAGGACACCTGCCTATGC
TTCAATGCACTCAAAGGCTTACCAGGGCCCTACATAAAATGGTTCCTTGAGAAAACTGGGCATGAAGGTTTGAACAATTT
GTTGCTAGCCTATGAAGATAAATCTGCTTTTGCTATGTGCATCTTTTCTCTTGCTCTTGGACCAGGAGAAGAACCAATGA
CATTCGTTGGGAAAACAGCAGGAAAGATTGTGCCTGCTAGAGGACCTGCTGATTTTGGATGGGACCCAGTATTCCAACCA
GATGGTTTTGATCAAACCTACGCTGAGATGCCCAAGTCAGTGAAGAATCAAATATCTCACAGGGGAAAAGCTCTTGCTTT
GGTGAAAGAACACTTTGCAGCTGCCAACTATAAAGTTCAGAACGATGGTTCAGCTTGA
Microexon DNA seq GGCCCTACAT
Microexon Amino Acid seq GPYI
Microexon-tag DNA Seq CTTGTTGAGGACACCTGCCTATGCTTCAATGCACTCAAAGGCTTACCAGGGCCCTACATAAAATGGTTCCTTGAGAAAACTGGGCATGAAGGTTTGAACAATTTGTTG
Microexon-tag Amino Acid seq LVEDTCLCFNALKGLPGPYIKWFLEKTGHEGLNNLL
Transcript ID Os10t0457500-01
Gene ID Os.6614
Gene Name NA
Pfam domain motif Ham1p_like
Motif E-value 7.4e-53
Motif start 16
Motif end 190
Protein seq >Os10t0457500-01
MSGAAAAAARALPKAVTFVTGNAKKLEEVRAILGSSIPFQSLKLDLPELQGEPEDISKEKARMAASQVNGPVLVEDTCLC
FNALKGLPGPYIKWFLEKTGHEGLNNLLLAYEDKSAFAMCIFSLALGPGEEPMTFVGKTAGKIVPARGPADFGWDPVFQP
DGFDQTYAEMPKSVKNQISHRGKALALVKEHFAAANYKVQNDGSA*
CDS seq >Os10t0457500-01
ATGTCCGGGGCGGCGGCGGCGGCGGCGCGGGCGCTGCCCAAGGCGGTGACCTTCGTGACGGGCAACGCCAAGAAGCTGGA
GGAAGTCCGCGCCATCCTCGGCTCCTCCATCCCCTTCCAGTCCCTCAAGCTCGACCTCCCTGAATTGCAAGGTGAGCCGG
AGGACATATCTAAAGAGAAAGCACGAATGGCTGCATCCCAGGTGAATGGGCCTGTACTTGTTGAGGACACCTGCCTATGC
TTCAATGCACTCAAAGGCTTACCAGGGCCCTACATAAAATGGTTCCTTGAGAAAACTGGGCATGAAGGTTTGAACAATTT
GTTGCTAGCCTATGAAGATAAATCTGCTTTTGCTATGTGCATCTTTTCTCTTGCTCTTGGACCAGGAGAAGAACCAATGA
CATTCGTTGGGAAAACAGCAGGAAAGATTGTGCCTGCTAGAGGACCTGCTGATTTTGGATGGGACCCAGTATTCCAACCA
GATGGTTTTGATCAAACCTACGCTGAGATGCCCAAGTCAGTGAAGAATCAAATATCTCACAGGGGAAAAGCTCTTGCTTT
GGTGAAAGAACACTTTGCAGCTGCCAACTATAAAGTTCAGAACGATGGTTCAGCTTGA