
Microexon ID | Os_10:16770493-16770502:- |
Species | Oryza sativa | Coordinates | 10:16770493..16770502 |
Microexon Cluster ID | MEP24 |
Size | 10 |
Phase | 1 |
Pfam Domain Motif | Ham1p_like |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,10,32,17 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTKGTKGARGAYACTTGYCTCTGYTTCAATGCMYTCAARGGTCTTCCAGGGCCYTACATMAARTGGTTTCTGSAGAAGATTGGTCATGAAGGTYTGAACAAYTTGYTR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGCCCTACAT |
Microexon Amino Acid seq | GPYI |
Microexon-tag DNA Seq | CTTGTTGAGGACACCTGCCTATGCTTCAATGCACTCAAAGGCTTACCAGGGCCCTACATAAAATGGTTCCTTGAGAAAACTGGGCATGAAGGTTTGAACAATTTGTTG |
Microexon-tag Amino Acid Seq | LVEDTCLCFNALKGLPGPYIKWFLEKTGHEGLNNLL |
Microexon-tag spanning region | 16770122-16770636 |
Microexon-tag prediction score | 0.9725 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os10t0457500-01x |
Reference Transcript ID | Os10t0457500-01 |
Gene ID | Os10g0457500 |
Gene Name | NA |
Transcript ID | Os10t0457500-01 |
Protein ID | Os10t0457500-01 |
Gene ID | Os10g0457500 |
Gene Name | NA |
Pfam domain motif | Ham1p_like |
Motif E-value | 7.2e-53 |
Motif start | 16 |
Motif end | 190 |
Protein seq | >Os10t0457500-01 MSGAAAAAARALPKAVTFVTGNAKKLEEVRAILGSSIPFQSLKLDLPELQGEPEDISKEKARMAASQVNGPVLVEDTCLC FNALKGLPGPYIKWFLEKTGHEGLNNLLLAYEDKSAFAMCIFSLALGPGEEPMTFVGKTAGKIVPARGPADFGWDPVFQP DGFDQTYAEMPKSVKNQISHRGKALALVKEHFAAANYKVQNDGSA* |
CDS seq | >Os10t0457500-01 ATGTCCGGGGCGGCGGCGGCGGCGGCGCGGGCGCTGCCCAAGGCGGTGACCTTCGTGACGGGCAACGCCAAGAAGCTGGA GGAAGTCCGCGCCATCCTCGGCTCCTCCATCCCCTTCCAGTCCCTCAAGCTCGACCTCCCTGAATTGCAAGGTGAGCCGG AGGACATATCTAAAGAGAAAGCACGAATGGCTGCATCCCAGGTGAATGGGCCTGTACTTGTTGAGGACACCTGCCTATGC TTCAATGCACTCAAAGGCTTACCAGGGCCCTACATAAAATGGTTCCTTGAGAAAACTGGGCATGAAGGTTTGAACAATTT GTTGCTAGCCTATGAAGATAAATCTGCTTTTGCTATGTGCATCTTTTCTCTTGCTCTTGGACCAGGAGAAGAACCAATGA CATTCGTTGGGAAAACAGCAGGAAAGATTGTGCCTGCTAGAGGACCTGCTGATTTTGGATGGGACCCAGTATTCCAACCA GATGGTTTTGATCAAACCTACGCTGAGATGCCCAAGTCAGTGAAGAATCAAATATCTCACAGGGGAAAAGCTCTTGCTTT GGTGAAAGAACACTTTGCAGCTGCCAACTATAAAGTTCAGAACGATGGTTCAGCTTGA |
Microexon DNA seq | GGCCCTACAT |
Microexon Amino Acid seq | GPYI |
Microexon-tag DNA Seq | CTTGTTGAGGACACCTGCCTATGCTTCAATGCACTCAAAGGCTTACCAGGGCCCTACATAAAATGGTTCCTTGAGAAAACTGGGCATGAAGGTTTGAACAATTTGTTG |
Microexon-tag Amino Acid seq | LVEDTCLCFNALKGLPGPYIKWFLEKTGHEGLNNLL |
Transcript ID | Os10t0457500-01 |
Gene ID | Os.6614 |
Gene Name | NA |
Pfam domain motif | Ham1p_like |
Motif E-value | 7.4e-53 |
Motif start | 16 |
Motif end | 190 |
Protein seq | >Os10t0457500-01 MSGAAAAAARALPKAVTFVTGNAKKLEEVRAILGSSIPFQSLKLDLPELQGEPEDISKEKARMAASQVNGPVLVEDTCLC FNALKGLPGPYIKWFLEKTGHEGLNNLLLAYEDKSAFAMCIFSLALGPGEEPMTFVGKTAGKIVPARGPADFGWDPVFQP DGFDQTYAEMPKSVKNQISHRGKALALVKEHFAAANYKVQNDGSA* |
CDS seq | >Os10t0457500-01 ATGTCCGGGGCGGCGGCGGCGGCGGCGCGGGCGCTGCCCAAGGCGGTGACCTTCGTGACGGGCAACGCCAAGAAGCTGGA GGAAGTCCGCGCCATCCTCGGCTCCTCCATCCCCTTCCAGTCCCTCAAGCTCGACCTCCCTGAATTGCAAGGTGAGCCGG AGGACATATCTAAAGAGAAAGCACGAATGGCTGCATCCCAGGTGAATGGGCCTGTACTTGTTGAGGACACCTGCCTATGC TTCAATGCACTCAAAGGCTTACCAGGGCCCTACATAAAATGGTTCCTTGAGAAAACTGGGCATGAAGGTTTGAACAATTT GTTGCTAGCCTATGAAGATAAATCTGCTTTTGCTATGTGCATCTTTTCTCTTGCTCTTGGACCAGGAGAAGAACCAATGA CATTCGTTGGGAAAACAGCAGGAAAGATTGTGCCTGCTAGAGGACCTGCTGATTTTGGATGGGACCCAGTATTCCAACCA GATGGTTTTGATCAAACCTACGCTGAGATGCCCAAGTCAGTGAAGAATCAAATATCTCACAGGGGAAAAGCTCTTGCTTT GGTGAAAGAACACTTTGCAGCTGCCAACTATAAAGTTCAGAACGATGGTTCAGCTTGA |