
Microexon ID | Ha_1:127818334-127818343:+ |
Species | Helianthus annuus | Coordinates | 1:127818334..127818343 |
Microexon Cluster ID | MEP24 |
Size | 10 |
Phase | 1 |
Pfam Domain Motif | Ham1p_like |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,10,32,17 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTKGTKGARGAYACTTGYCTCTGYTTCAATGCMYTCAARGGTCTTCCAGGGCCYTACATMAARTGGTTTCTGSAGAAGATTGGTCATGAAGGTYTGAACAAYTTGYTR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGCCTTACAT |
Microexon Amino Acid seq | GPYI |
Microexon-tag DNA Seq | CTGGTTGAGGACACTTGTCTTTGTTTTAATGCTCTTAAGGGACTCCCTGGGCCTTACATCAAATGGTTTCTCCAAAAGCTTGGTCACGAAGGTCTAAACAATATGTTG |
Microexon-tag Amino Acid Seq | MVEDTCLCFNALKGLPGPYIKWFLQKLGHEGLNNML |
Microexon-tag spanning region | 127818199-127820482 |
Microexon-tag prediction score | 0.9683 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG37789x |
Reference Transcript ID | OTG37789 |
Gene ID | HannXRQ_Chr01g0022691 |
Gene Name | ITPA |
Transcript ID | OTG37789 |
Protein ID | OTG37789 |
Gene ID | HannXRQ_Chr01g0022691 |
Gene Name | ITPA |
Pfam domain motif | Ham1p_like |
Motif E-value | 2.2e-54 |
Motif start | 18 |
Motif end | 190 |
Protein seq | >OTG37789 MAAARVVAGSGLVKLPPVTFVTGNAKKLEEVKVILGQSIPFQSLKLDLPELQGDPEDIAKEKARLAANQVKGPVLVEDTC LCFNALKGLPGPYIKWFLQKLGHEGLNNMLMAYEDKSAYALCIFSLAIGPDSEPLTFVGKTPGKIVPARGPNDFGWDPVF QPDGYEQTYAEMPKEEKNKISHRSRALALVKSHFAEAGYVFDI* |
CDS seq | >OTG37789 ATGGCTGCGGCGCGTGTGGTGGCGGGGAGTGGACTGGTGAAGTTACCTCCGGTGACTTTCGTGACCGGAAACGCCAAAAA GCTCGAAGAAGTTAAAGTTATTTTAGGGCAATCAATCCCCTTTCAGTCCCTTAAACTCGACTTGCCGGAATTGCAAGGCG ACCCAGAAGATATTGCCAAAGAGAAAGCTCGTTTGGCTGCTAATCAGGTGAAAGGGCCAGTGCTGGTTGAGGACACTTGT CTTTGTTTTAATGCTCTTAAGGGACTCCCTGGGCCTTACATCAAATGGTTTCTCCAAAAGCTTGGTCACGAAGGTCTAAA CAATATGTTGATGGCTTATGAAGATAAATCTGCGTATGCTCTCTGTATATTTTCTCTTGCTATAGGGCCGGATTCTGAAC CCCTTACATTTGTGGGAAAGACCCCGGGGAAGATTGTTCCTGCAAGAGGACCGAACGACTTTGGATGGGATCCCGTCTTC CAACCTGATGGCTACGAACAAACTTATGCTGAAATGCCCAAGGAAGAAAAGAATAAGATATCTCATCGCTCAAGAGCTCT TGCATTGGTAAAATCCCACTTTGCAGAGGCCGGGTATGTGTTCGATATATAA |
Microexon DNA seq | GGCCTTACAT |
Microexon Amino Acid seq | GPYI |
Microexon-tag DNA Seq | CTGGTTGAGGACACTTGTCTTTGTTTTAATGCTCTTAAGGGACTCCCTGGGCCTTACATCAAATGGTTTCTCCAAAAGCTTGGTCACGAAGGTCTAAACAATATGTTG |
Microexon-tag Amino Acid seq | MVEDTCLCFNALKGLPGPYIKWFLQKLGHEGLNNML |
Transcript ID | OTG37789 |
Gene ID | Ha.2373 |
Gene Name | ITPA |
Pfam domain motif | Ham1p_like |
Motif E-value | 2.2e-54 |
Motif start | 18 |
Motif end | 190 |
Protein seq | >OTG37789 MAAARVVAGSGLVKLPPVTFVTGNAKKLEEVKVILGQSIPFQSLKLDLPELQGDPEDIAKEKARLAANQVKGPVLVEDTC LCFNALKGLPGPYIKWFLQKLGHEGLNNMLMAYEDKSAYALCIFSLAIGPDSEPLTFVGKTPGKIVPARGPNDFGWDPVF QPDGYEQTYAEMPKEEKNKISHRSRALALVKSHFAEAGYVFDI* |
CDS seq | >OTG37789 ATGGCTGCGGCGCGTGTGGTGGCGGGGAGTGGACTGGTGAAGTTACCTCCGGTGACTTTCGTGACCGGAAACGCCAAAAA GCTCGAAGAAGTTAAAGTTATTTTAGGGCAATCAATCCCCTTTCAGTCCCTTAAACTCGACTTGCCGGAATTGCAAGGCG ACCCAGAAGATATTGCCAAAGAGAAAGCTCGTTTGGCTGCTAATCAGGTGAAAGGGCCAGTGCTGGTTGAGGACACTTGT CTTTGTTTTAATGCTCTTAAGGGACTCCCTGGGCCTTACATCAAATGGTTTCTCCAAAAGCTTGGTCACGAAGGTCTAAA CAATATGTTGATGGCTTATGAAGATAAATCTGCGTATGCTCTCTGTATATTTTCTCTTGCTATAGGGCCGGATTCTGAAC CCCTTACATTTGTGGGAAAGACCCCGGGGAAGATTGTTCCTGCAAGAGGACCGAACGACTTTGGATGGGATCCCGTCTTC CAACCTGATGGCTACGAACAAACTTATGCTGAAATGCCCAAGGAAGAAAAGAATAAGATATCTCATCGCTCAAGAGCTCT TGCATTGGTAAAATCCCACTTTGCAGAGGCCGGGTATGTGTTCGATATATAA |