Microexon ID Gm_20:28040000-28040009:-
Species Glycine max
Coordinates 20:28040000..28040009
Microexon Cluster ID MEP24
Size 10
Phase 1
Pfam Domain Motif Ham1p_like
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,10,32,17
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTKGTKGARGAYACTTGYCTCTGYTTCAATGCMYTCAARGGTCTTCCAGGGCCYTACATMAARTGGTTTCTGSAGAAGATTGGTCATGAAGGTYTGAACAAYTTGYTR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGCCTTACAT
Microexon Amino Acid seq GPYI
Microexon-tag DNA Seq TTGGTTGAAGACACTTGCCTCTGTTTCAATGCCTTGAAGGGTCTTCCAGGGCCTTACATCAAATGGTTTCTGCAGAAGCTTGGTCATGAAGGTCTCAACAATTTGCTG
Microexon-tag Amino Acid Seq MVEDTCLCFNALKGLPGPYIKWFLQKLGHEGLNNLL
Microexon-tag spanning region28030340-28040149
Microexon-tag prediction score0.9868
Overlapped with the annotated transcript (%) 100
New Transcript ID KRG90247x
Reference Transcript ID KRG90247
Gene ID GLYMA_20G077400
Gene Name NA
Transcript ID KRG90247
Protein ID KRG90247
Gene ID GLYMA_20G077400
Gene Name NA
Pfam domain motif Ham1p_like
Motif E-value 1.3e-53
Motif start 13
Motif end 185
Protein seq >KRG90247
MAAARGLVLSRPVTFVTANAKKLEEVRAILGNSIPFQSLKLDLPELQGEPEDISKEKARIAALQVNGPVLVEDTCLCFNA
LKGLPGPYIKWFLQKLGHEGLNNLLMAYDDKSAYALCVFSFAAGPDSEPITFSGKTPGKIVPPRGPNDFGWDPIFEPDGY
DQTYAQMPKEEKNKISHRSKSLALVKSHFAEARFTFDVKNF*
CDS seq >KRG90247
ATGGCTGCTGCACGAGGGTTGGTACTGTCACGTCCTGTTACTTTTGTAACTGCCAATGCCAAAAAGCTTGAAGAAGTTCG
TGCCATCTTGGGCAATTCCATTCCTTTTCAGTCCCTCAAACTTGACTTGCCAGAGTTGCAAGGAGAACCTGAAGATATCT
CCAAAGAGAAGGCTCGAATTGCTGCTCTTCAGGTGAATGGACCTGTGTTGGTTGAAGACACTTGCCTCTGTTTCAATGCC
TTGAAGGGTCTTCCAGGGCCTTACATCAAATGGTTTCTGCAGAAGCTTGGTCATGAAGGTCTCAACAATTTGCTGATGGC
ATATGATGATAAATCAGCGTATGCCTTATGTGTATTTTCCTTTGCTGCTGGTCCAGACAGTGAACCTATCACATTTTCTG
GAAAAACTCCGGGAAAGATTGTTCCTCCAAGAGGGCCTAATGATTTTGGATGGGATCCTATTTTTGAACCTGATGGCTAT
GACCAAACGTATGCTCAGATGCCCAAAGAAGAAAAGAACAAAATTTCCCACCGCTCCAAATCTCTTGCATTGGTGAAATC
TCATTTTGCTGAAGCTAGATTTACTTTTGACGTCAAGAACTTCTGA
Microexon DNA seq GGCCTTACAT
Microexon Amino Acid seq GPYI
Microexon-tag DNA Seq TTGGTTGAAGACACTTGCCTCTGTTTCAATGCCTTGAAGGGTCTTCCAGGGCCTTACATCAAATGGTTTCTGCAGAAGCTTGGTCATGAAGGTCTCAACAATTTGCTG
Microexon-tag Amino Acid seq MVEDTCLCFNALKGLPGPYIKWFLQKLGHEGLNNLL
Transcript ID Gm.33091.1
Gene ID Gm.33091
Gene Name NA
Pfam domain motif Ham1p_like
Motif E-value 1.3e-53
Motif start 13
Motif end 185
Protein seq >Gm.33091.1
MAAARGLVLSRPVTFVTANAKKLEEVRAILGNSIPFQSLKLDLPELQGEPEDISKEKARIAALQVNGPVLVEDTCLCFNA
LKGLPGPYIKWFLQKLGHEGLNNLLMAYDDKSAYALCVFSFAAGPDSEPITFSGKTPGKIVPPRGPNDFGWDPIFEPDGY
DQTYAQMPKEEKNKISHRSKSLALVKSHFAEARFTFDVKNF*
CDS seq >Gm.33091.1
ATGGCTGCTGCACGAGGGTTGGTACTGTCACGTCCTGTTACTTTTGTAACTGCCAATGCCAAAAAGCTTGAAGAAGTTCG
TGCCATCTTGGGCAATTCCATTCCTTTTCAGTCCCTCAAACTTGACTTGCCAGAGTTGCAAGGAGAACCTGAAGATATCT
CCAAAGAGAAGGCTCGAATTGCTGCTCTTCAGGTGAATGGACCTGTGTTGGTTGAAGACACTTGCCTCTGTTTCAATGCC
TTGAAGGGTCTTCCAGGGCCTTACATCAAATGGTTTCTGCAGAAGCTTGGTCATGAAGGTCTCAACAATTTGCTGATGGC
ATATGATGATAAATCAGCGTATGCCTTATGTGTATTTTCCTTTGCTGCTGGTCCAGACAGTGAACCTATCACATTTTCTG
GAAAAACTCCGGGAAAGATTGTTCCTCCAAGAGGGCCTAATGATTTTGGATGGGATCCTATTTTTGAACCTGATGGCTAT
GACCAAACGTATGCTCAGATGCCCAAAGAAGAAAAGAACAAAATTTCCCACCGCTCCAAATCTCTTGCATTGGTGAAATC
TCATTTTGCTGAAGCTAGATTTACTTTTGACGTCAAGAACTTCTGA