
Microexon ID | Gm_20:28040000-28040009:- |
Species | Glycine max | Coordinates | 20:28040000..28040009 |
Microexon Cluster ID | MEP24 |
Size | 10 |
Phase | 1 |
Pfam Domain Motif | Ham1p_like |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,10,32,17 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTKGTKGARGAYACTTGYCTCTGYTTCAATGCMYTCAARGGTCTTCCAGGGCCYTACATMAARTGGTTTCTGSAGAAGATTGGTCATGAAGGTYTGAACAAYTTGYTR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGCCTTACAT |
Microexon Amino Acid seq | GPYI |
Microexon-tag DNA Seq | TTGGTTGAAGACACTTGCCTCTGTTTCAATGCCTTGAAGGGTCTTCCAGGGCCTTACATCAAATGGTTTCTGCAGAAGCTTGGTCATGAAGGTCTCAACAATTTGCTG |
Microexon-tag Amino Acid Seq | MVEDTCLCFNALKGLPGPYIKWFLQKLGHEGLNNLL |
Microexon-tag spanning region | 28030340-28040149 |
Microexon-tag prediction score | 0.9868 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRG90247x |
Reference Transcript ID | KRG90247 |
Gene ID | GLYMA_20G077400 |
Gene Name | NA |
Transcript ID | KRG90247 |
Protein ID | KRG90247 |
Gene ID | GLYMA_20G077400 |
Gene Name | NA |
Pfam domain motif | Ham1p_like |
Motif E-value | 1.3e-53 |
Motif start | 13 |
Motif end | 185 |
Protein seq | >KRG90247 MAAARGLVLSRPVTFVTANAKKLEEVRAILGNSIPFQSLKLDLPELQGEPEDISKEKARIAALQVNGPVLVEDTCLCFNA LKGLPGPYIKWFLQKLGHEGLNNLLMAYDDKSAYALCVFSFAAGPDSEPITFSGKTPGKIVPPRGPNDFGWDPIFEPDGY DQTYAQMPKEEKNKISHRSKSLALVKSHFAEARFTFDVKNF* |
CDS seq | >KRG90247 ATGGCTGCTGCACGAGGGTTGGTACTGTCACGTCCTGTTACTTTTGTAACTGCCAATGCCAAAAAGCTTGAAGAAGTTCG TGCCATCTTGGGCAATTCCATTCCTTTTCAGTCCCTCAAACTTGACTTGCCAGAGTTGCAAGGAGAACCTGAAGATATCT CCAAAGAGAAGGCTCGAATTGCTGCTCTTCAGGTGAATGGACCTGTGTTGGTTGAAGACACTTGCCTCTGTTTCAATGCC TTGAAGGGTCTTCCAGGGCCTTACATCAAATGGTTTCTGCAGAAGCTTGGTCATGAAGGTCTCAACAATTTGCTGATGGC ATATGATGATAAATCAGCGTATGCCTTATGTGTATTTTCCTTTGCTGCTGGTCCAGACAGTGAACCTATCACATTTTCTG GAAAAACTCCGGGAAAGATTGTTCCTCCAAGAGGGCCTAATGATTTTGGATGGGATCCTATTTTTGAACCTGATGGCTAT GACCAAACGTATGCTCAGATGCCCAAAGAAGAAAAGAACAAAATTTCCCACCGCTCCAAATCTCTTGCATTGGTGAAATC TCATTTTGCTGAAGCTAGATTTACTTTTGACGTCAAGAACTTCTGA |
Microexon DNA seq | GGCCTTACAT |
Microexon Amino Acid seq | GPYI |
Microexon-tag DNA Seq | TTGGTTGAAGACACTTGCCTCTGTTTCAATGCCTTGAAGGGTCTTCCAGGGCCTTACATCAAATGGTTTCTGCAGAAGCTTGGTCATGAAGGTCTCAACAATTTGCTG |
Microexon-tag Amino Acid seq | MVEDTCLCFNALKGLPGPYIKWFLQKLGHEGLNNLL |
Transcript ID | Gm.33091.1 |
Gene ID | Gm.33091 |
Gene Name | NA |
Pfam domain motif | Ham1p_like |
Motif E-value | 1.3e-53 |
Motif start | 13 |
Motif end | 185 |
Protein seq | >Gm.33091.1 MAAARGLVLSRPVTFVTANAKKLEEVRAILGNSIPFQSLKLDLPELQGEPEDISKEKARIAALQVNGPVLVEDTCLCFNA LKGLPGPYIKWFLQKLGHEGLNNLLMAYDDKSAYALCVFSFAAGPDSEPITFSGKTPGKIVPPRGPNDFGWDPIFEPDGY DQTYAQMPKEEKNKISHRSKSLALVKSHFAEARFTFDVKNF* |
CDS seq | >Gm.33091.1 ATGGCTGCTGCACGAGGGTTGGTACTGTCACGTCCTGTTACTTTTGTAACTGCCAATGCCAAAAAGCTTGAAGAAGTTCG TGCCATCTTGGGCAATTCCATTCCTTTTCAGTCCCTCAAACTTGACTTGCCAGAGTTGCAAGGAGAACCTGAAGATATCT CCAAAGAGAAGGCTCGAATTGCTGCTCTTCAGGTGAATGGACCTGTGTTGGTTGAAGACACTTGCCTCTGTTTCAATGCC TTGAAGGGTCTTCCAGGGCCTTACATCAAATGGTTTCTGCAGAAGCTTGGTCATGAAGGTCTCAACAATTTGCTGATGGC ATATGATGATAAATCAGCGTATGCCTTATGTGTATTTTCCTTTGCTGCTGGTCCAGACAGTGAACCTATCACATTTTCTG GAAAAACTCCGGGAAAGATTGTTCCTCCAAGAGGGCCTAATGATTTTGGATGGGATCCTATTTTTGAACCTGATGGCTAT GACCAAACGTATGCTCAGATGCCCAAAGAAGAAAAGAACAAAATTTCCCACCGCTCCAAATCTCTTGCATTGGTGAAATC TCATTTTGCTGAAGCTAGATTTACTTTTGACGTCAAGAACTTCTGA |