Microexon ID Zm_2:4121137-4121146:+
Species Zea mays
Coordinates 2:4121137..4121146
Microexon Cluster ID MEP23
Size 10
Phase 0
Pfam Domain Motif AAA
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,10,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GATAAAGTTG
Microexon Amino Acid seq DKVA
Microexon-tag DNA Seq ACGTTCGAGTACCTGCAGGGGGATTACTACATCGCACCTGCCTTCCTCGATAAAGTTGCATGCCACATTGTAAAGAACTACATTGCGCATCTTCTTAATAATATCAAG
Microexon-tag Amino Acid Seq TFEYLQGDYYIAPAFLDKVACHIVKNYIAHLLNNIK
Microexon-tag spanning region4120981-4121963
Microexon-tag prediction score0.9367
Overlapped with the annotated transcript (%) 72.48
New Transcript ID Zm00001d001995_T002x
Reference Transcript ID Zm00001d001995_T002
Gene ID Zm00001d001995
Gene Name NA
Transcript ID Zm00001d001995_T001
Protein ID Zm00001d001995_P001
Gene ID Zm00001d001995
Gene Name NA
Pfam domain motif AAA
Motif E-value 1.7e-12
Motif start 147
Motif end 289
Protein seq >Zm00001d001995_P001
MATTSVAASSPHPHLSRPRRRNSSATSRTSIRGCLLPIRCSSASSSQPPATGGEEGESGRRRLSKQSSWEDRDVEGDDYL
YRLGKEADNLNITVGARSGIVDELFVGNFLGKDSDIVFDYRQKATRTFEYLQGDYYIAPAFLDKVGIWGGKGQGKTFQTE
LIFRAMGVEPVIMSAGELESEKAGEPGRLIRDRYRTASQVIQNQGKMSCLMINDLDAGVGRFGNTQMTVNNQIAVGTLMN
LADNPTRVSIGQKWRESDVTHRVPIIVTGNDFSTLYAPLIRDGRMEKFYWQPNREDIISIVHGMYIKDGLSVEEVSRIVD
AFPNQALDFYGALRSRTYDQAILEWVEEIGGHEQLNEKLLKRKKGEELPTFIPPKPTLEALIESGYSLVKEQELIMSSKL
SKEYMKNLE*
CDS seq >Zm00001d001995_T001
ATGGCCACCACCTCCGTCGCCGCCTCCTCTCCCCATCCCCATCTGTCCCGCCCCCGCCGGCGGAACTCCAGCGCCACCTC
CAGAACCTCGATCCGGGGCTGCCTCCTGCCCATCCGATGCTCGTCCGCCTCGTCGTCGCAACCGCCGGCAACCGGCGGCG
AGGAGGGAGAGTCGGGGCGCCGGCGGCTGTCGAAGCAGTCGTCGTGGGAGGACAGAGATGTGGAGGGGGACGACTACCTC
TACCGCCTCGGGAAGGAGGCTGACAACTTGAACATCACCGTTGGCGCACGGTCCGGCATCGTCGACGAACTCTTCGTCGG
AAACTTCCTCGGGAAAGACTCGGATATCGTGTTCGACTACCGGCAGAAGGCAACTAGAACGTTCGAGTACCTGCAGGGGG
ATTACTACATCGCACCTGCCTTCCTCGATAAAGTTGGGATCTGGGGCGGAAAAGGCCAAGGGAAAACATTCCAGACTGAA
CTTATATTTAGAGCAATGGGTGTGGAGCCAGTAATTATGTCTGCAGGCGAACTAGAATCTGAAAAAGCAGGTGAACCCGG
GAGGCTAATACGTGATAGATACAGAACTGCCTCCCAAGTAATCCAAAACCAAGGGAAAATGAGTTGCTTGATGATCAACG
ATCTAGATGCTGGTGTTGGAAGATTTGGAAACACGCAGATGACGGTCAATAATCAAATAGCTGTTGGAACTTTGATGAAT
TTGGCAGATAATCCTACTAGGGTGAGCATCGGCCAGAAATGGAGAGAATCTGATGTTACACACAGGGTGCCAATAATAGT
TACTGGAAATGATTTTTCAACTCTATATGCACCCTTAATTCGTGATGGGAGAATGGAAAAATTCTACTGGCAGCCCAACC
GTGAAGATATAATTAGTATTGTTCATGGCATGTATATAAAGGATGGATTATCTGTTGAAGAAGTATCAAGAATTGTAGAC
GCATTTCCAAACCAAGCTCTGGACTTCTATGGAGCTTTGAGATCCAGGACATATGATCAGGCTATCTTGGAGTGGGTCGA
AGAAATCGGTGGGCATGAACAGCTAAATGAGAAGCTTCTTAAGCGAAAGAAAGGCGAGGAGCTTCCAACGTTTATACCCC
CAAAGCCAACACTGGAAGCATTGATTGAGTCAGGGTACTCGCTGGTGAAGGAGCAGGAACTAATAATGAGCTCCAAGCTT
TCAAAAGAGTATATGAAGAACTTAGAATAG
Microexon DNA seq GATAAAGTTG
Microexon Amino Acid seq DKVG
Microexon-tag DNA Seq ACGTTCGAGTACCTGCAGGGGGATTACTACATCGCACCTGCCTTCCTCGATAAAGTTGGGATCTGGGGCGGAAAAGGCCAAGGGAAAACATTCCAGACTGAACTTATA
Microexon-tag Amino Acid seq TFEYLQGDYYIAPAFLDKVGIWGGKGQGKTFQTELI
Transcript ID Zm00001d001995_T001
Gene ID Zm.8697
Gene Name NA
Pfam domain motif AAA
Motif E-value 1.7e-12
Motif start 147
Motif end 289
Protein seq >Zm00001d001995_T001
MATTSVAASSPHPHLSRPRRRNSSATSRTSIRGCLLPIRCSSASSSQPPATGGEEGESGRRRLSKQSSWEDRDVEGDDYL
YRLGKEADNLNITVGARSGIVDELFVGNFLGKDSDIVFDYRQKATRTFEYLQGDYYIAPAFLDKVGIWGGKGQGKTFQTE
LIFRAMGVEPVIMSAGELESEKAGEPGRLIRDRYRTASQVIQNQGKMSCLMINDLDAGVGRFGNTQMTVNNQIAVGTLMN
LADNPTRVSIGQKWRESDVTHRVPIIVTGNDFSTLYAPLIRDGRMEKFYWQPNREDIISIVHGMYIKDGLSVEEVSRIVD
AFPNQALDFYGALRSRTYDQAILEWVEEIGGHEQLNEKLLKRKKGEELPTFIPPKPTLEALIESGYSLVKEQELIMSSKL
SKEYMKNLE*
CDS seq >Zm00001d001995_T001
ATGGCCACCACCTCCGTCGCCGCCTCCTCTCCCCATCCCCATCTGTCCCGCCCCCGCCGGCGGAACTCCAGCGCCACCTC
CAGAACCTCGATCCGGGGCTGCCTCCTGCCCATCCGATGCTCGTCCGCCTCGTCGTCGCAACCGCCGGCAACCGGCGGCG
AGGAGGGAGAGTCGGGGCGCCGGCGGCTGTCGAAGCAGTCGTCGTGGGAGGACAGAGATGTGGAGGGGGACGACTACCTC
TACCGCCTCGGGAAGGAGGCTGACAACTTGAACATCACCGTTGGCGCACGGTCCGGCATCGTCGACGAACTCTTCGTCGG
AAACTTCCTCGGGAAAGACTCGGATATCGTGTTCGACTACCGGCAGAAGGCAACTAGAACGTTCGAGTACCTGCAGGGGG
ATTACTACATCGCACCTGCCTTCCTCGATAAAGTTGGGATCTGGGGCGGAAAAGGCCAAGGGAAAACATTCCAGACTGAA
CTTATATTTAGAGCAATGGGTGTGGAGCCAGTAATTATGTCTGCAGGCGAACTAGAATCTGAAAAAGCAGGTGAACCCGG
GAGGCTAATACGTGATAGATACAGAACTGCCTCCCAAGTAATCCAAAACCAAGGGAAAATGAGTTGCTTGATGATCAACG
ATCTAGATGCTGGTGTTGGAAGATTTGGAAACACGCAGATGACGGTCAATAATCAAATAGCTGTTGGAACTTTGATGAAT
TTGGCAGATAATCCTACTAGGGTGAGCATCGGCCAGAAATGGAGAGAATCTGATGTTACACACAGGGTGCCAATAATAGT
TACTGGAAATGATTTTTCAACTCTATATGCACCCTTAATTCGTGATGGGAGAATGGAAAAATTCTACTGGCAGCCCAACC
GTGAAGATATAATTAGTATTGTTCATGGCATGTATATAAAGGATGGATTATCTGTTGAAGAAGTATCAAGAATTGTAGAC
GCATTTCCAAACCAAGCTCTGGACTTCTATGGAGCTTTGAGATCCAGGACATATGATCAGGCTATCTTGGAGTGGGTCGA
AGAAATCGGTGGGCATGAACAGCTAAATGAGAAGCTTCTTAAGCGAAAGAAAGGCGAGGAGCTTCCAACGTTTATACCCC
CAAAGCCAACACTGGAAGCATTGATTGAGTCAGGGTACTCGCTGGTGAAGGAGCAGGAACTAATAATGAGCTCCAAGCTT
TCAAAAGAGTATATGAAGAACTTAGAATAG