Microexon ID Vv_9:18216248-18216257:-
Species Vistis vinifera
Coordinates 9:18216248..18216257
Microexon Cluster ID MEP23
Size 10
Phase 0
Pfam Domain Motif AAA
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,10,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GATAAAGTTG
Microexon Amino Acid seq DKVV
Microexon-tag DNA Seq TCATTTGAGTATCTTCAAGGGGATTACTACATCGCTCCTGTCTTCATGGATAAAGTTGTGTGCCACATTGTGAAGAACTACATTGCTCATCTTCTCAACACCAATGTA
Microexon-tag Amino Acid Seq SFEYLQGDYYIAPVFMDKVVCHIVKNYIAHLLNTNV
Microexon-tag spanning region18213970-18217889
Microexon-tag prediction score0.9802
Overlapped with the annotated transcript (%) 87.5
New Transcript ID VIT_09s0018g01270.t01x
Reference Transcript ID VIT_09s0018g01270.t01
Gene ID VIT_09s0018g01270
Gene Name NA
Vv_9:18216248-18216257:- does not have available information here.
Microexon DNA seq GATAAAGTTG
Microexon Amino Acid seq DKVV
Microexon-tag DNA Seq TCATTTGAGTATCTTCAAGGGGATTACTACATCGCTCCTGTCTTCATGGATAAAGTTGTGTGCCACATTGTGAAGAACTACATTGCTCATCTTCTCAACACCAATGTA
Microexon-tag Amino Acid seq SFEYLQGDYYIAPVFMDKVVCHIVKNYIAHLLNTNV
Transcript ID Vv.33067.1
Gene ID Vv.33067
Gene Name NA
Pfam domain motif Torsin
Motif E-value 0.0057
Motif start 152
Motif end 198
Protein seq >Vv.33067.1
MALCNFHNTLLSSSSSSSYSSSFSPLSPFLKPPNALRFFTKFSTSPFSLRALNSSNNDNPTGESAGGEAGQRRISEQSSW
EAKDSEGRDYLYRLGKEADNMNIAVGARAGIIDDLFVGNFLGRDSDIVFDYRQKVTRSFEYLQGDYYIAPVFMDKVVCHI
VKNYIAHLLNTNVPLILGIWGGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKMS
CLMINDIDAGIGRFGNTQVTVNNQIAVGTLMNLSDNPTRVSIGQDWRETDITNRVPIIVTGNDFSTIYAPLIRDGRMDKF
YWQPTHEDIINIVDRMYEKDGISRDAVVRIVDTFPNQALDFYGALRSRTYDRSISKWVDDIGGVENLGNKLLRRRKDEKL
PVFVPPKQTIDALLESGYSLIKEQQLIMETKLSKEYMKNIDD*
CDS seq >Vv.33067.1
ATGGCGCTCTGCAACTTCCACAACACGCTCCTCTCCTCCTCCTCCTCCTCCTCCTATTCTTCCTCTTTTTCTCCTCTGTC
GCCATTTCTTAAACCTCCAAATGCTCTTAGATTCTTCACCAAATTCTCTACCTCTCCTTTCTCTCTGCGCGCCCTCAACT
CGTCTAACAACGACAATCCCACCGGGGAAAGCGCCGGCGGCGAAGCTGGCCAGAGAAGGATTTCCGAGCAATCCTCCTGG
GAGGCCAAGGACTCCGAGGGAAGGGACTATCTGTACAGGCTGGGGAAAGAGGCTGATAACATGAATATCGCGGTTGGGGC
TAGGGCTGGCATCATTGATGATCTTTTTGTTGGGAATTTTCTCGGCCGAGACTCGGATATTGTGTTTGATTACCGACAAA
AAGTGACTCGCTCATTTGAGTATCTTCAAGGGGATTACTACATCGCTCCTGTCTTCATGGATAAAGTTGTGTGCCACATT
GTGAAGAACTACATTGCTCATCTTCTCAACACCAATGTACCTCTAATACTAGGCATTTGGGGAGGAAAAGGTCAGGGAAA
ATCATTTCAAACAGAACTTATTTTCCAGGCCATGGGAATAGAACCTGTCATTATGTCTGCTGGGGAACTGGAATCAGAAA
GAGCCGGAGAACCAGGGAAATTGATACGGGAACGGTATAGAACAGCTTCTCAAGTGGTCCAGAACCAAGGGAAGATGAGC
TGTTTAATGATCAATGACATTGATGCTGGCATTGGGAGATTTGGAAACACTCAAGTGACAGTCAACAATCAAATTGCTGT
TGGGACTCTGATGAATTTGTCAGATAATCCTACAAGAGTCAGTATTGGACAAGATTGGCGAGAAACTGACATTACGAATA
GAGTTCCTATAATTGTTACAGGAAATGATTTTTCAACAATCTATGCTCCCTTGATTCGTGATGGAAGGATGGACAAGTTC
TACTGGCAGCCTACCCATGAAGATATCATAAATATTGTCGATAGGATGTATGAGAAAGATGGCATATCTAGGGATGCAGT
TGTAAGAATTGTGGACACATTTCCTAATCAAGCTTTGGATTTTTATGGAGCTCTTAGGTCCCGAACATATGATCGATCAA
TCTCCAAGTGGGTGGATGATATTGGAGGTGTTGAAAATCTCGGAAACAAACTCCTCAGGAGAAGGAAGGATGAAAAACTT
CCTGTGTTTGTTCCACCAAAGCAAACTATTGATGCTTTACTTGAGTCTGGTTACTCTCTCATCAAAGAACAGCAGTTGAT
AATGGAGACCAAACTTTCAAAAGAATACATGAAGAACATTGATGACTAG