
Microexon ID | Ta_2D:596001694-596001703:+ |
Species | Triticum Aestivum | Coordinates | 2D:596001694..596001703 |
Microexon Cluster ID | MEP23 |
Size | 10 |
Phase | 0 |
Pfam Domain Motif | AAA |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,10,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATAAAGTTG |
Microexon Amino Acid seq | DKVA |
Microexon-tag DNA Seq | AAATTTGAGTATCTGCAGGGAGATTACTACATCGCGCCTGCCTTCCTCGATAAAGTTGCGGTCCACATTGTAAAGAACTTCCTTGCAAATAATCTTAATATCAAGATT |
Microexon-tag Amino Acid Seq | KFEYLQGDYYIAPAFLDKVAVHIVKNFLANNLNIKI |
Microexon-tag spanning region | 596001527-596002371 |
Microexon-tag prediction score | 0.9623 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2D02G501700.1x |
Reference Transcript ID | TraesCS2D02G501700.1 |
Gene ID | TraesCS2D02G501700 |
Gene Name | NA |
Transcript ID | TraesCS2D02G501700.1 |
Protein ID | |
Gene ID | TraesCS2D02G501700 |
Gene Name | |
Pfam domain motif | Torsin |
Motif E-value | 0.011 |
Motif start | 155 |
Motif end | 200 |
Protein seq | >TraesCS2D02G501700.1 MAATSLAAASHCHRHHILLPARPSPGCFNLRTPNRGRICPAFPSVLCSSSSSASHQPTAGDEEEAEDGEEGHGRRLSKQS SWEATDGQGDDYLYRLGKEADNMNIAVGARSGIVDDLFVGKFLGRDSDIVFDYRQKATRKFEYLQGDYYIAPAFLDKVAV HIVKNFLANNLNIKIPLILGVWGGKGQGKTFQTELIFKAMGVEPVIMSAGELESERAGEPGRLIRDRYRTASQVVQNQGK MSCLMINDLDAGLGRFGHTQMTVNNQIVVGTLMNLADNPNRVSIGQKWRESDITHRIPIIATGNDFSTLYAPLIRDGRME KFYWQPTREDIINIVHRMYTKDGLSFEEVSSIVDTFPNQALDFYGALRSRTYDQAILQWVNDIGGYEQLGEKLLKRKNRE KLPTFIPPKPTLDALIQSGNSLVEEQAFVMNSNLSKEYMKNLDD* |
CDS seq | >TraesCS2D02G501700.1 ATGGCCGCCACCTCCCTCGCCGCCGCTTCGCACTGCCACCGCCACCACATCCTCCTCCCCGCTCGCCCCAGCCCCGGCTG CTTCAACCTCAGAACCCCCAACCGAGGACGAATCTGCCCCGCCTTCCCGTCCGTTCTCTGCTCCTCCTCTTCCTCTGCTT CTCACCAGCCCACCGCCGGCGACGAGGAGGAGGCGGAGGATGGGGAGGAGGGGCACGGGAGGAGGCTTTCGAAGCAGTCC TCGTGGGAGGCCACGGATGGTCAGGGCGACGACTACCTCTACCGCCTCGGGAAGGAGGCCGACAACATGAACATCGCCGT CGGTGCCCGCAGTGGCATCGTGGACGACCTCTTCGTCGGCAAATTCCTCGGAAGAGACTCGGATATCGTGTTCGATTACC GCCAGAAGGCGACGAGGAAATTTGAGTATCTGCAGGGAGATTACTACATCGCGCCTGCCTTCCTCGATAAAGTTGCGGTC CACATTGTAAAGAACTTCCTTGCAAATAATCTTAATATCAAGATTCCCCTTATACTTGGTGTCTGGGGTGGCAAGGGGCA AGGGAAAACATTCCAGACTGAACTTATATTTAAAGCAATGGGTGTTGAGCCTGTTATTATGTCTGCTGGAGAACTCGAAT CCGAGAGAGCAGGTGAACCTGGAAGACTTATACGTGACCGATACAGAACGGCCTCTCAAGTAGTTCAAAACCAAGGGAAA ATGAGCTGTTTGATGATCAATGACCTAGATGCTGGTCTTGGAAGATTTGGACACACACAAATGACGGTCAATAATCAAAT CGTGGTTGGAACATTGATGAACTTGGCAGATAATCCTAACAGGGTTAGTATCGGGCAGAAATGGAGAGAATCTGATATAA CACATAGAATTCCAATAATAGCAACTGGAAATGATTTTTCAACACTATATGCTCCTTTGATTCGTGATGGGAGGATGGAA AAGTTCTACTGGCAGCCCACCCGTGAAGATATAATTAACATTGTTCACCGTATGTATACAAAGGATGGGTTATCTTTTGA GGAAGTTTCAAGCATTGTAGATACATTTCCAAATCAAGCTCTCGACTTTTATGGAGCTTTGAGATCCAGGACATATGACC AGGCTATCTTGCAGTGGGTAAATGACATTGGTGGTTATGAGCAACTAGGTGAAAAGCTTCTCAAGCGGAAGAACAGAGAG AAGCTTCCAACATTTATCCCTCCGAAGCCAACACTGGATGCATTGATTCAGTCAGGGAACTCTCTGGTAGAAGAGCAGGC ATTCGTAATGAATTCGAACTTGTCAAAAGAATATATGAAGAACTTAGATGACTAG |
Ta_2D:596001694-596001703:+ does not have available information here.