Microexon ID Ta_2D:596001694-596001703:+
Species Triticum   Aestivum
Coordinates 2D:596001694..596001703
Microexon Cluster ID MEP23
Size 10
Phase 0
Pfam Domain Motif AAA
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,10,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GATAAAGTTG
Microexon Amino Acid seq DKVA
Microexon-tag DNA Seq AAATTTGAGTATCTGCAGGGAGATTACTACATCGCGCCTGCCTTCCTCGATAAAGTTGCGGTCCACATTGTAAAGAACTTCCTTGCAAATAATCTTAATATCAAGATT
Microexon-tag Amino Acid Seq KFEYLQGDYYIAPAFLDKVAVHIVKNFLANNLNIKI
Microexon-tag spanning region596001527-596002371
Microexon-tag prediction score0.9623
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS2D02G501700.1x
Reference Transcript ID TraesCS2D02G501700.1
Gene ID TraesCS2D02G501700
Gene Name NA
Transcript ID TraesCS2D02G501700.1
Protein ID
Gene ID TraesCS2D02G501700
Gene Name
Pfam domain motif Torsin
Motif E-value 0.011
Motif start 155
Motif end 200
Protein seq >TraesCS2D02G501700.1
MAATSLAAASHCHRHHILLPARPSPGCFNLRTPNRGRICPAFPSVLCSSSSSASHQPTAGDEEEAEDGEEGHGRRLSKQS
SWEATDGQGDDYLYRLGKEADNMNIAVGARSGIVDDLFVGKFLGRDSDIVFDYRQKATRKFEYLQGDYYIAPAFLDKVAV
HIVKNFLANNLNIKIPLILGVWGGKGQGKTFQTELIFKAMGVEPVIMSAGELESERAGEPGRLIRDRYRTASQVVQNQGK
MSCLMINDLDAGLGRFGHTQMTVNNQIVVGTLMNLADNPNRVSIGQKWRESDITHRIPIIATGNDFSTLYAPLIRDGRME
KFYWQPTREDIINIVHRMYTKDGLSFEEVSSIVDTFPNQALDFYGALRSRTYDQAILQWVNDIGGYEQLGEKLLKRKNRE
KLPTFIPPKPTLDALIQSGNSLVEEQAFVMNSNLSKEYMKNLDD*
CDS seq >TraesCS2D02G501700.1
ATGGCCGCCACCTCCCTCGCCGCCGCTTCGCACTGCCACCGCCACCACATCCTCCTCCCCGCTCGCCCCAGCCCCGGCTG
CTTCAACCTCAGAACCCCCAACCGAGGACGAATCTGCCCCGCCTTCCCGTCCGTTCTCTGCTCCTCCTCTTCCTCTGCTT
CTCACCAGCCCACCGCCGGCGACGAGGAGGAGGCGGAGGATGGGGAGGAGGGGCACGGGAGGAGGCTTTCGAAGCAGTCC
TCGTGGGAGGCCACGGATGGTCAGGGCGACGACTACCTCTACCGCCTCGGGAAGGAGGCCGACAACATGAACATCGCCGT
CGGTGCCCGCAGTGGCATCGTGGACGACCTCTTCGTCGGCAAATTCCTCGGAAGAGACTCGGATATCGTGTTCGATTACC
GCCAGAAGGCGACGAGGAAATTTGAGTATCTGCAGGGAGATTACTACATCGCGCCTGCCTTCCTCGATAAAGTTGCGGTC
CACATTGTAAAGAACTTCCTTGCAAATAATCTTAATATCAAGATTCCCCTTATACTTGGTGTCTGGGGTGGCAAGGGGCA
AGGGAAAACATTCCAGACTGAACTTATATTTAAAGCAATGGGTGTTGAGCCTGTTATTATGTCTGCTGGAGAACTCGAAT
CCGAGAGAGCAGGTGAACCTGGAAGACTTATACGTGACCGATACAGAACGGCCTCTCAAGTAGTTCAAAACCAAGGGAAA
ATGAGCTGTTTGATGATCAATGACCTAGATGCTGGTCTTGGAAGATTTGGACACACACAAATGACGGTCAATAATCAAAT
CGTGGTTGGAACATTGATGAACTTGGCAGATAATCCTAACAGGGTTAGTATCGGGCAGAAATGGAGAGAATCTGATATAA
CACATAGAATTCCAATAATAGCAACTGGAAATGATTTTTCAACACTATATGCTCCTTTGATTCGTGATGGGAGGATGGAA
AAGTTCTACTGGCAGCCCACCCGTGAAGATATAATTAACATTGTTCACCGTATGTATACAAAGGATGGGTTATCTTTTGA
GGAAGTTTCAAGCATTGTAGATACATTTCCAAATCAAGCTCTCGACTTTTATGGAGCTTTGAGATCCAGGACATATGACC
AGGCTATCTTGCAGTGGGTAAATGACATTGGTGGTTATGAGCAACTAGGTGAAAAGCTTCTCAAGCGGAAGAACAGAGAG
AAGCTTCCAACATTTATCCCTCCGAAGCCAACACTGGATGCATTGATTCAGTCAGGGAACTCTCTGGTAGAAGAGCAGGC
ATTCGTAATGAATTCGAACTTGTCAAAAGAATATATGAAGAACTTAGATGACTAG
Ta_2D:596001694-596001703:+ does not have available information here.