
Microexon ID | Sm_GL377574:1819876-1819885:- |
Species | Selaginella moellendorffii | Coordinates | GL377574:1819876..1819885 |
Microexon Cluster ID | MEP23 |
Size | 10 |
Phase | 0 |
Pfam Domain Motif | AAA |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,10,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Sm_GL377574:1819876-1819885:- does not have available information here.
Sm_GL377574:1819876-1819885:- does not have available information here.
Microexon DNA seq | GATGCTGTAG |
Microexon Amino Acid seq | DAVV |
Microexon-tag DNA Seq | TCGTTCGAGCATTTGCAAGGAGACTACTATATAGCCCCGGCATTTCTGGATGCTGTAGTGACGCACATTGTCAAAAATTATGTTGCCGAGCAGCTAGACACTAGTGTC |
Microexon-tag Amino Acid seq | SFEHLQGDYYIAPAFLDAVVTHIVKNYVAEQLDTSV |
Transcript ID | Sm.7289.9 |
Gene ID | Sm.7289 |
Gene Name | NA |
Pfam domain motif | Torsin |
Motif E-value | 0.014 |
Motif start | 154 |
Motif end | 199 |
Protein seq | >Sm.7289.9 MTTALFQGVYSSTSGMAGMVGYSAFLMGNYEQHRHLTAGIHFCRRRASSLRSSLSYSSPSCSSSSPRENEPVQERLGPSS WTAKDSVGEDYLYRLGKEADNMNITVGARQGMIDSVFVGDFLGKEADIVFAYRQKVTRSFEHLQGDYYIAPAFLDAVVTH IVKNYVAEQLDTSVPLILGVWGGKGQGKTFQTELIFKAMGVEPVIMSAGEMESERAGEPGRLIRDRYRTAAQVVKNQGKL SCLMINDIDAGIGRFENTQMTVNNQIVVGTLMNLADNPTQVSVGQDWREGDVIKRVPIIVTGNDFSTLWAPLIRDGRMDK FYWQPSREDLINIVYRMYSKDGLSRVDVETIVDKFPNQALDFYGALKSRACDEELWKWLESNGGPEKLNEIFRQSKKKTI DFNPPEQTLTSLLKAGTSLVEEQKMVTKMRLSDEYMKKQTGEGGLIGLS* |
CDS seq | >Sm.7289.9 ATGACCACGGCATTGTTTCAAGGGGTTTACAGCAGCACTAGTGGAATGGCCGGGATGGTAGGATATTCGGCGTTTCTGAT GGGAAATTATGAGCAGCACAGGCATCTTACAGCAGGCATCCACTTTTGTAGAAGGAGAGCTTCGAGTCTTCGCTCTTCAC TATCATACTCAAGTCCCTCCTGCTCGTCGTCGTCACCCAGGGAAAATGAACCGGTGCAGGAGAGGCTGGGGCCTTCATCA TGGACTGCCAAGGATTCTGTAGGCGAAGATTATCTCTACAGGCTTGGAAAAGAGGCCGATAATATGAACATCACCGTCGG AGCACGTCAAGGGATGATCGATAGCGTTTTTGTTGGTGATTTTCTTGGAAAGGAAGCCGATATTGTGTTCGCTTACAGGC AGAAAGTCACACGTTCGTTCGAGCATTTGCAAGGAGACTACTATATAGCCCCGGCATTTCTGGATGCTGTAGTGACGCAC ATTGTCAAAAATTATGTTGCCGAGCAGCTAGACACTAGTGTCCCTCTCATCCTCGGTGTATGGGGTGGTAAAGGGCAAGG AAAGACTTTCCAGACCGAGCTAATATTTAAGGCCATGGGAGTGGAGCCTGTCATCATGTCTGCGGGAGAAATGGAGTCGG AAAGAGCTGGTGAACCCGGACGCTTGATCAGGGATCGTTACAGAACAGCTGCACAAGTTGTAAAAAATCAGGGAAAACTG AGCTGCCTGATGATCAACGATATTGATGCTGGCATTGGGCGATTTGAAAACACCCAGATGACAGTGAACAATCAAATTGT GGTGGGTACGCTGATGAACTTGGCCGACAATCCAACACAAGTTAGCGTTGGTCAAGATTGGCGGGAAGGAGACGTTATCA AGCGGGTTCCAATTATTGTAACGGGGAACGATTTCTCGACTCTTTGGGCGCCGCTTATTCGCGATGGTCGAATGGACAAG TTTTACTGGCAACCAAGTAGAGAGGATCTGATCAATATTGTCTACCGTATGTACTCCAAAGACGGTCTTTCACGCGTGGA CGTCGAAACTATTGTCGACAAATTTCCTAATCAAGCTCTAGACTTCTACGGTGCTCTAAAGTCCAGAGCATGTGACGAAG AATTGTGGAAGTGGCTGGAATCTAATGGTGGTCCCGAGAAACTCAACGAAATATTTCGCCAGAGCAAAAAGAAAACCATT GATTTCAATCCGCCTGAGCAAACACTCACGAGTCTACTGAAAGCCGGGACCTCTCTAGTCGAGGAACAGAAAATGGTGAC AAAGATGCGACTGTCTGATGAGTACATGAAGAAACAAACCGGTGAAGGTGGTCTGATCGGACTTTCTTAG |