Microexon ID Sm_GL377574:1819876-1819885:-
Species Selaginella moellendorffii
Coordinates GL377574:1819876..1819885
Microexon Cluster ID MEP23
Size 10
Phase 0
Pfam Domain Motif AAA
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,10,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Sm_GL377574:1819876-1819885:- does not have available information here.
Sm_GL377574:1819876-1819885:- does not have available information here.
Microexon DNA seq GATGCTGTAG
Microexon Amino Acid seq DAVV
Microexon-tag DNA Seq TCGTTCGAGCATTTGCAAGGAGACTACTATATAGCCCCGGCATTTCTGGATGCTGTAGTGACGCACATTGTCAAAAATTATGTTGCCGAGCAGCTAGACACTAGTGTC
Microexon-tag Amino Acid seq SFEHLQGDYYIAPAFLDAVVTHIVKNYVAEQLDTSV
Transcript ID Sm.7289.9
Gene ID Sm.7289
Gene Name NA
Pfam domain motif Torsin
Motif E-value 0.014
Motif start 154
Motif end 199
Protein seq >Sm.7289.9
MTTALFQGVYSSTSGMAGMVGYSAFLMGNYEQHRHLTAGIHFCRRRASSLRSSLSYSSPSCSSSSPRENEPVQERLGPSS
WTAKDSVGEDYLYRLGKEADNMNITVGARQGMIDSVFVGDFLGKEADIVFAYRQKVTRSFEHLQGDYYIAPAFLDAVVTH
IVKNYVAEQLDTSVPLILGVWGGKGQGKTFQTELIFKAMGVEPVIMSAGEMESERAGEPGRLIRDRYRTAAQVVKNQGKL
SCLMINDIDAGIGRFENTQMTVNNQIVVGTLMNLADNPTQVSVGQDWREGDVIKRVPIIVTGNDFSTLWAPLIRDGRMDK
FYWQPSREDLINIVYRMYSKDGLSRVDVETIVDKFPNQALDFYGALKSRACDEELWKWLESNGGPEKLNEIFRQSKKKTI
DFNPPEQTLTSLLKAGTSLVEEQKMVTKMRLSDEYMKKQTGEGGLIGLS*
CDS seq >Sm.7289.9
ATGACCACGGCATTGTTTCAAGGGGTTTACAGCAGCACTAGTGGAATGGCCGGGATGGTAGGATATTCGGCGTTTCTGAT
GGGAAATTATGAGCAGCACAGGCATCTTACAGCAGGCATCCACTTTTGTAGAAGGAGAGCTTCGAGTCTTCGCTCTTCAC
TATCATACTCAAGTCCCTCCTGCTCGTCGTCGTCACCCAGGGAAAATGAACCGGTGCAGGAGAGGCTGGGGCCTTCATCA
TGGACTGCCAAGGATTCTGTAGGCGAAGATTATCTCTACAGGCTTGGAAAAGAGGCCGATAATATGAACATCACCGTCGG
AGCACGTCAAGGGATGATCGATAGCGTTTTTGTTGGTGATTTTCTTGGAAAGGAAGCCGATATTGTGTTCGCTTACAGGC
AGAAAGTCACACGTTCGTTCGAGCATTTGCAAGGAGACTACTATATAGCCCCGGCATTTCTGGATGCTGTAGTGACGCAC
ATTGTCAAAAATTATGTTGCCGAGCAGCTAGACACTAGTGTCCCTCTCATCCTCGGTGTATGGGGTGGTAAAGGGCAAGG
AAAGACTTTCCAGACCGAGCTAATATTTAAGGCCATGGGAGTGGAGCCTGTCATCATGTCTGCGGGAGAAATGGAGTCGG
AAAGAGCTGGTGAACCCGGACGCTTGATCAGGGATCGTTACAGAACAGCTGCACAAGTTGTAAAAAATCAGGGAAAACTG
AGCTGCCTGATGATCAACGATATTGATGCTGGCATTGGGCGATTTGAAAACACCCAGATGACAGTGAACAATCAAATTGT
GGTGGGTACGCTGATGAACTTGGCCGACAATCCAACACAAGTTAGCGTTGGTCAAGATTGGCGGGAAGGAGACGTTATCA
AGCGGGTTCCAATTATTGTAACGGGGAACGATTTCTCGACTCTTTGGGCGCCGCTTATTCGCGATGGTCGAATGGACAAG
TTTTACTGGCAACCAAGTAGAGAGGATCTGATCAATATTGTCTACCGTATGTACTCCAAAGACGGTCTTTCACGCGTGGA
CGTCGAAACTATTGTCGACAAATTTCCTAATCAAGCTCTAGACTTCTACGGTGCTCTAAAGTCCAGAGCATGTGACGAAG
AATTGTGGAAGTGGCTGGAATCTAATGGTGGTCCCGAGAAACTCAACGAAATATTTCGCCAGAGCAAAAAGAAAACCATT
GATTTCAATCCGCCTGAGCAAACACTCACGAGTCTACTGAAAGCCGGGACCTCTCTAGTCGAGGAACAGAAAATGGTGAC
AAAGATGCGACTGTCTGATGAGTACATGAAGAAACAAACCGGTGAAGGTGGTCTGATCGGACTTTCTTAG