| Microexon ID | Pt_1:2707639-2707648:+ |
| Species | Populus Trichocarpa | Coordinates | 1:2707639..2707648 |
| Microexon Cluster ID | MEP23 |
| Size | 10 |
| Phase | 0 |
| Pfam Domain Motif | AAA |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,10,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GATAAAGTTG |
| Microexon Amino Acid seq | DKVV |
| Microexon-tag DNA Seq | TCATTTGAGTATCTTCAAGGCGATTATTACATTGCTCCTTTGTTCTTGGATAAAGTTGTGTGCCATATTGTGAAGAACTACCTAGCTCATCGTCTGAACGTCAAAGTT |
| Microexon-tag Amino Acid Seq | SFEYLQGDYYIAPLFLDKVVCHIVKNYLAHRLNVKV |
| Microexon-tag spanning region | 2706694-2708150 |
| Microexon-tag prediction score | 0.9624 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.001G037300.1.v4.1x |
| Reference Transcript ID | Potri.001G037300.1.v4.1 |
| Gene ID | Potri.001G037300.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.001G037300.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.001G037300.v4.1 |
| Gene Name | |
| Pfam domain motif | Torsin |
| Motif E-value | 0.005 |
| Motif start | 139 |
| Motif end | 183 |
| Protein seq | >Potri.001G037300.1.v4.1 MALFNTPSSSLLQTQNFFTSPKKISPFLITVSCSKSPSQPTSSPSPVDDNSENEEPKRRLSQQSSWEAKDSEGKDYLYRL GKEADNMNIAVGARAGVVDSLFAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPLFLDKVVCHIVKNYLAHRLNVKVP LILGIWGGKGQGKSFQTELIFQTLGVEPVIMSAGELESERAGEPGRLIRERYRTASQVVQNQGKMSCLMINDLDAGLGRF GNTQMTVNNQIVVGTLMNLSDNPTRVSIGQDWRESDITNRVPIIVTGNDFSTIYAPLIRDGRMEKFYWQPNREDIVNIVH RMYEKDGISRDEVVSIVNKFPNQALDFYGALRSRTYDRSISKWVDDIGGIENLGKQLLRRKKDEKLPEFTPPEQTMEALL ESGHSLIREQQLIMETKLSKEYMKNVDD* |
| CDS seq | >Potri.001G037300.1.v4.1 ATGGCTCTCTTCAATACCCCATCATCATCTCTTTTGCAGACACAAAATTTCTTTACTAGTCCTAAGAAAATATCACCCTT CTTGATCACTGTTTCTTGCTCAAAATCACCATCACAGCCGACGTCATCGCCTTCTCCTGTTGATGATAATAGTGAGAATG AAGAGCCAAAGAGAAGATTATCACAGCAATCATCATGGGAAGCTAAGGATTCAGAGGGAAAAGACTATCTTTACAGGCTA GGAAAAGAAGCTGATAATATGAACATTGCGGTTGGAGCTAGGGCTGGTGTTGTTGATTCTCTTTTTGCTGGAAATTTTCT TGGCAAAGACTCTGATATTGTGTTTGATTACCGTCAAAAAGTGACAAGATCATTTGAGTATCTTCAAGGCGATTATTACA TTGCTCCTTTGTTCTTGGATAAAGTTGTGTGCCATATTGTGAAGAACTACCTAGCTCATCGTCTGAACGTCAAAGTTCCT TTGATTCTAGGTATCTGGGGAGGAAAAGGCCAAGGAAAATCATTTCAGACTGAACTTATTTTTCAAACCTTGGGAGTTGA ACCTGTAATTATGTCTGCTGGAGAATTAGAATCAGAAAGAGCTGGAGAACCAGGAAGATTGATCAGGGAACGCTATAGAA CTGCTTCCCAAGTGGTCCAAAACCAAGGAAAGATGAGCTGTTTGATGATCAATGACCTTGATGCTGGCCTTGGTAGATTT GGAAATACTCAAATGACAGTCAACAATCAAATCGTTGTGGGGACTCTAATGAATTTGTCAGATAATCCTACAAGGGTTAG TATTGGACAAGATTGGCGAGAATCAGATATCACAAACAGAGTTCCAATCATTGTTACTGGAAATGATTTTTCAACAATTT ATGCTCCCTTGATTCGTGATGGAAGGATGGAAAAATTTTACTGGCAGCCTAACCGGGAAGATATTGTGAATATTGTTCAC AGAATGTATGAGAAGGATGGCATATCCAGAGATGAGGTTGTGAGCATTGTGAACAAATTTCCTAATCAAGCTTTGGATTT CTATGGAGCTCTTAGGTCCAGAACATACGACAGGTCAATTTCTAAGTGGGTCGATGATATTGGAGGTATTGAAAATCTTG GTAAACAACTTCTCAGGCGAAAGAAGGATGAGAAACTTCCTGAGTTTACTCCCCCAGAGCAAACGATGGAGGCTTTGCTT GAATCAGGCCACTCTCTCATAAGAGAGCAGCAGCTGATTATGGAGACTAAGCTTTCAAAGGAATACATGAAGAATGTTGA TGACTAG |
Pt_1:2707639-2707648:+ does not have available information here.