Microexon ID Ps_NC_039360.1:211795735-211795744:-
Species Papaver somniferum
Coordinates NC_039360.1:211795735..211795744
Microexon Cluster ID MEP23
Size 10
Phase 0
Pfam Domain Motif AAA
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,10,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GATAAAGTTG
Microexon Amino Acid seq DKVA
Microexon-tag DNA Seq ACGTTTGAGTATCTTCAAGGTGACTATTACATTGCTCCAGTATTCATGGATAAAGTTGCTTGCCATCTCGTGAAGAACTTCATCGTTAATCAACTCAATGTCAAAGTC
Microexon-tag Amino Acid Seq TFEYLQGDYYIAPVFMDKVACHLVKNFIVNQLNVKV
Microexon-tag spanning region211795571-211796032
Microexon-tag prediction score0.9399
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026602167.1x
Reference Transcript ID XM_026602167.1
Gene ID NA
Gene Name NA
Transcript ID XM_026602167.1
Protein ID XP_026457952.1
Gene ID LOC113358570
Gene Name NA
Pfam domain motif Torsin
Motif E-value 0.025
Motif start 138
Motif end 182
Protein seq >XP_026457952.1
MILGLRINTNRVSFNSTCDNLLINKIRSNSRRGNLVFAKTISSNSEEIDEKLVKNEKKISDQSSWEAKDSEGKDYLYRLG
KEADNMNISVGARAGIIDDLFVGSFLGKDSDIVFDYRQKATRTFEYLQGDYYIAPVFMDKVACHLVKNFIVNQLNVKVPL
ILGIWGGKGQGKTFQTELIFRAMGVEPIIMSAGELESERAGEPGRMIRERYRTASQVIQNQGKMSCLMINDIDAGLGRHG
HTQMTVNNQIVVGTLMNLCDNPTRVSIGQDWRASDMTHRVPIIVTGNDLSTIYAPLIRDGRMDKFYWQPTREDIIGIVHR
MYEKDGIPRDAVESIVDTFPNQALDFYGAMRSRTYDRSISKWVEEVGGFENLGKTLLKRKKEGKLPTFIPPEQTVEGLLE
SGNSLIKEQQLIMGTKLSKEYMKNLDD*
CDS seq >XM_026602167.1
ATGATTCTAGGTTTAAGGATAAACACTAATCGAGTGAGTTTTAATAGTACTTGTGATAATTTGTTGATTAATAAGATTAG
GTCAAACTCTAGAAGGGGAAATTTGGTTTTTGCGAAGACAATTTCATCGAATTCGGAAGAAATTGATGAGAAATTAGTGA
AGAATGAGAAGAAAATATCTGATCAGTCTTCATGGGAAGCTAAAGATTCAGAAGGGAAAGATTATTTGTATAGGTTGGGT
AAAGAAGCTGATAATATGAATATCTCTGTTGGAGCCAGAGCTGGAATTATTGATGATCTTTTCGTTGGAAGTTTTCTTGG
AAAAGACTCGGATATTGTGTTTGATTATCGGCAAAAAGCGACTCGAACGTTTGAGTATCTTCAAGGTGACTATTACATTG
CTCCAGTATTCATGGATAAAGTTGCTTGCCATCTCGTGAAGAACTTCATCGTTAATCAACTCAATGTCAAAGTCCCTTTA
ATCCTAGGTATTTGGGGAGGAAAAGGACAGGGGAAGACTTTTCAGACAGAACTTATTTTCCGGGCAATGGGAGTTGAACC
AATTATTATGTCTGCAGGGGAACTAGAATCAGAAAGAGCAGGAGAACCAGGACGAATGATCCGTGAGCGATACCGAACAG
CTTCACAAGTGATCCAGAACCAAGGAAAGATGAGCTGTTTGATGATTAATGATATCGATGCTGGGCTAGGTAGACATGGA
CACACTCAGATGACAGTCAACAATCAAATTGTTGTTGGTACACTGATGAATTTGTGTGATAATCCTACGAGAGTTAGCAT
TGGCCAAGACTGGAGAGCATCTGATATGACACATAGAGTTCCTATAATCGTTACAGGAAATGACCTCTCGACAATCTATG
CTCCCTTGATTCGCGACGGAAGGATGGACAAATTTTATTGGCAGCCAACTCGTGAAGATATCATAGGAATTGTCCACCGA
ATGTACGAGAAAGATGGTATACCAAGGGACGCAGTTGAGAGCATCGTGGACACCTTTCCTAACCAAGCCTTGGATTTTTA
TGGAGCTATGAGGTCCCGCACATACGATCGGTCTATCTCTAAGTGGGTAGAGGAAGTTGGTGGTTTTGAGAATCTTGGGA
AAACACTTCTCAAACGAAAAAAAGAAGGCAAGCTTCCTACATTCATTCCCCCAGAGCAAACTGTGGAAGGTTTGCTGGAA
TCAGGTAACTCTCTCATCAAAGAACAACAACTAATTATGGGTACCAAACTTTCCAAGGAATACATGAAAAATCTTGATGA
TTAA
Microexon DNA seq GATAAAGTTG
Microexon Amino Acid seq DKVA
Microexon-tag DNA Seq ACGTTTGAGTATCTTCAAGGTGACTATTACATTGCTCCAGTATTCATGGATAAAGTTGCTTGCCATCTCGTGAAGAACTTCATCGTTAATCAACTCAATGTCAAAGTC
Microexon-tag Amino Acid seq TFEYLQGDYYIAPVFMDKVACHLVKNFIVNQLNVKV
Transcript ID Ps.21544.1
Gene ID Ps.21544
Gene Name NA
Pfam domain motif Torsin
Motif E-value 0.008
Motif start 138
Motif end 183
Protein seq >Ps.21544.1
MILGLRINTNRVSFNSTCDNLLINKIRSNSRRGNLVFAKTISSNSEEIDEKLVKNEKKISDQSSWEAKDSEGKDYLYRLG
KEADNMNISVGARAGIIDDLFVGSFLGKDSDIVFDYRQKATRTFEYLQGDYYIAPVFMDKVACHLVKNFIVNQLNVKVPL
ILGIWGGKGQGKTFQTELIFRAMGVEPIIMSAGELESERAGEPGRMIRERYRTASQVIQNQVRSLFYFH*
CDS seq >Ps.21544.1
ATGATTCTAGGTTTAAGGATAAACACTAATCGAGTGAGTTTTAATAGTACTTGTGATAATTTGTTGATTAATAAGATTAG
GTCAAACTCTAGAAGGGGAAATTTGGTTTTTGCGAAGACAATTTCATCGAATTCGGAAGAAATTGATGAGAAATTAGTGA
AGAATGAGAAGAAAATATCTGATCAGTCTTCATGGGAAGCTAAAGATTCAGAAGGGAAAGATTATTTGTATAGGTTGGGT
AAAGAAGCTGATAATATGAATATCTCTGTTGGAGCCAGAGCTGGAATTATTGATGATCTTTTCGTTGGAAGTTTTCTTGG
AAAAGACTCGGATATTGTGTTTGATTATCGGCAAAAAGCGACTCGAACGTTTGAGTATCTTCAAGGTGACTATTACATTG
CTCCAGTATTCATGGATAAAGTTGCTTGCCATCTCGTGAAGAACTTCATCGTTAATCAACTCAATGTCAAAGTCCCTTTA
ATCCTAGGTATTTGGGGAGGAAAAGGACAGGGGAAGACTTTTCAGACAGAACTTATTTTCCGGGCAATGGGAGTTGAACC
AATTATTATGTCTGCAGGGGAACTAGAATCAGAAAGAGCAGGAGAACCAGGACGAATGATCCGTGAGCGATACCGAACAG
CTTCACAAGTGATCCAGAACCAAGTTAGAAGCCTCTTTTACTTTCATTAA