
Microexon ID | Ps_NC_039360.1:211795735-211795744:- |
Species | Papaver somniferum | Coordinates | NC_039360.1:211795735..211795744 |
Microexon Cluster ID | MEP23 |
Size | 10 |
Phase | 0 |
Pfam Domain Motif | AAA |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,10,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATAAAGTTG |
Microexon Amino Acid seq | DKVA |
Microexon-tag DNA Seq | ACGTTTGAGTATCTTCAAGGTGACTATTACATTGCTCCAGTATTCATGGATAAAGTTGCTTGCCATCTCGTGAAGAACTTCATCGTTAATCAACTCAATGTCAAAGTC |
Microexon-tag Amino Acid Seq | TFEYLQGDYYIAPVFMDKVACHLVKNFIVNQLNVKV |
Microexon-tag spanning region | 211795571-211796032 |
Microexon-tag prediction score | 0.9399 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026602167.1x |
Reference Transcript ID | XM_026602167.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026602167.1 |
Protein ID | XP_026457952.1 |
Gene ID | LOC113358570 |
Gene Name | NA |
Pfam domain motif | Torsin |
Motif E-value | 0.025 |
Motif start | 138 |
Motif end | 182 |
Protein seq | >XP_026457952.1 MILGLRINTNRVSFNSTCDNLLINKIRSNSRRGNLVFAKTISSNSEEIDEKLVKNEKKISDQSSWEAKDSEGKDYLYRLG KEADNMNISVGARAGIIDDLFVGSFLGKDSDIVFDYRQKATRTFEYLQGDYYIAPVFMDKVACHLVKNFIVNQLNVKVPL ILGIWGGKGQGKTFQTELIFRAMGVEPIIMSAGELESERAGEPGRMIRERYRTASQVIQNQGKMSCLMINDIDAGLGRHG HTQMTVNNQIVVGTLMNLCDNPTRVSIGQDWRASDMTHRVPIIVTGNDLSTIYAPLIRDGRMDKFYWQPTREDIIGIVHR MYEKDGIPRDAVESIVDTFPNQALDFYGAMRSRTYDRSISKWVEEVGGFENLGKTLLKRKKEGKLPTFIPPEQTVEGLLE SGNSLIKEQQLIMGTKLSKEYMKNLDD* |
CDS seq | >XM_026602167.1 ATGATTCTAGGTTTAAGGATAAACACTAATCGAGTGAGTTTTAATAGTACTTGTGATAATTTGTTGATTAATAAGATTAG GTCAAACTCTAGAAGGGGAAATTTGGTTTTTGCGAAGACAATTTCATCGAATTCGGAAGAAATTGATGAGAAATTAGTGA AGAATGAGAAGAAAATATCTGATCAGTCTTCATGGGAAGCTAAAGATTCAGAAGGGAAAGATTATTTGTATAGGTTGGGT AAAGAAGCTGATAATATGAATATCTCTGTTGGAGCCAGAGCTGGAATTATTGATGATCTTTTCGTTGGAAGTTTTCTTGG AAAAGACTCGGATATTGTGTTTGATTATCGGCAAAAAGCGACTCGAACGTTTGAGTATCTTCAAGGTGACTATTACATTG CTCCAGTATTCATGGATAAAGTTGCTTGCCATCTCGTGAAGAACTTCATCGTTAATCAACTCAATGTCAAAGTCCCTTTA ATCCTAGGTATTTGGGGAGGAAAAGGACAGGGGAAGACTTTTCAGACAGAACTTATTTTCCGGGCAATGGGAGTTGAACC AATTATTATGTCTGCAGGGGAACTAGAATCAGAAAGAGCAGGAGAACCAGGACGAATGATCCGTGAGCGATACCGAACAG CTTCACAAGTGATCCAGAACCAAGGAAAGATGAGCTGTTTGATGATTAATGATATCGATGCTGGGCTAGGTAGACATGGA CACACTCAGATGACAGTCAACAATCAAATTGTTGTTGGTACACTGATGAATTTGTGTGATAATCCTACGAGAGTTAGCAT TGGCCAAGACTGGAGAGCATCTGATATGACACATAGAGTTCCTATAATCGTTACAGGAAATGACCTCTCGACAATCTATG CTCCCTTGATTCGCGACGGAAGGATGGACAAATTTTATTGGCAGCCAACTCGTGAAGATATCATAGGAATTGTCCACCGA ATGTACGAGAAAGATGGTATACCAAGGGACGCAGTTGAGAGCATCGTGGACACCTTTCCTAACCAAGCCTTGGATTTTTA TGGAGCTATGAGGTCCCGCACATACGATCGGTCTATCTCTAAGTGGGTAGAGGAAGTTGGTGGTTTTGAGAATCTTGGGA AAACACTTCTCAAACGAAAAAAAGAAGGCAAGCTTCCTACATTCATTCCCCCAGAGCAAACTGTGGAAGGTTTGCTGGAA TCAGGTAACTCTCTCATCAAAGAACAACAACTAATTATGGGTACCAAACTTTCCAAGGAATACATGAAAAATCTTGATGA TTAA |
Microexon DNA seq | GATAAAGTTG |
Microexon Amino Acid seq | DKVA |
Microexon-tag DNA Seq | ACGTTTGAGTATCTTCAAGGTGACTATTACATTGCTCCAGTATTCATGGATAAAGTTGCTTGCCATCTCGTGAAGAACTTCATCGTTAATCAACTCAATGTCAAAGTC |
Microexon-tag Amino Acid seq | TFEYLQGDYYIAPVFMDKVACHLVKNFIVNQLNVKV |
Transcript ID | Ps.21544.1 |
Gene ID | Ps.21544 |
Gene Name | NA |
Pfam domain motif | Torsin |
Motif E-value | 0.008 |
Motif start | 138 |
Motif end | 183 |
Protein seq | >Ps.21544.1 MILGLRINTNRVSFNSTCDNLLINKIRSNSRRGNLVFAKTISSNSEEIDEKLVKNEKKISDQSSWEAKDSEGKDYLYRLG KEADNMNISVGARAGIIDDLFVGSFLGKDSDIVFDYRQKATRTFEYLQGDYYIAPVFMDKVACHLVKNFIVNQLNVKVPL ILGIWGGKGQGKTFQTELIFRAMGVEPIIMSAGELESERAGEPGRMIRERYRTASQVIQNQVRSLFYFH* |
CDS seq | >Ps.21544.1 ATGATTCTAGGTTTAAGGATAAACACTAATCGAGTGAGTTTTAATAGTACTTGTGATAATTTGTTGATTAATAAGATTAG GTCAAACTCTAGAAGGGGAAATTTGGTTTTTGCGAAGACAATTTCATCGAATTCGGAAGAAATTGATGAGAAATTAGTGA AGAATGAGAAGAAAATATCTGATCAGTCTTCATGGGAAGCTAAAGATTCAGAAGGGAAAGATTATTTGTATAGGTTGGGT AAAGAAGCTGATAATATGAATATCTCTGTTGGAGCCAGAGCTGGAATTATTGATGATCTTTTCGTTGGAAGTTTTCTTGG AAAAGACTCGGATATTGTGTTTGATTATCGGCAAAAAGCGACTCGAACGTTTGAGTATCTTCAAGGTGACTATTACATTG CTCCAGTATTCATGGATAAAGTTGCTTGCCATCTCGTGAAGAACTTCATCGTTAATCAACTCAATGTCAAAGTCCCTTTA ATCCTAGGTATTTGGGGAGGAAAAGGACAGGGGAAGACTTTTCAGACAGAACTTATTTTCCGGGCAATGGGAGTTGAACC AATTATTATGTCTGCAGGGGAACTAGAATCAGAAAGAGCAGGAGAACCAGGACGAATGATCCGTGAGCGATACCGAACAG CTTCACAAGTGATCCAGAACCAAGTTAGAAGCCTCTTTTACTTTCATTAA |