
Microexon ID | Pp_4:14906193-14906202:- |
Species | Physcomitrium patens | Coordinates | 4:14906193..14906202 |
Microexon Cluster ID | MEP23 |
Size | 10 |
Phase | 0 |
Pfam Domain Motif | AAA |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,10,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATAAAGTGG |
Microexon Amino Acid seq | DKVV |
Microexon-tag DNA Seq | TCATTTGAGCATATTACAGGAGATTACTACATCGCCCCTGCGTTTATGGATAAAGTGGTGACGCACATTGTCAAGAACTATCTGGCTGCACAAATTGACGGCAAAGTT |
Microexon-tag Amino Acid Seq | SFEHITGDYYIAPAFMDKVVTHIVKNYLAAQIDGKV |
Microexon-tag spanning region | 14905827-14906441 |
Microexon-tag prediction score | 0.9166 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c4_22100V3.1x |
Reference Transcript ID | Pp3c4_22100V3.1 |
Gene ID | Pp3c4_22100 |
Gene Name | NA |
Transcript ID | Pp3c4_22100V3.1 |
Protein ID | Pp3c4_22100V3.1 |
Gene ID | Pp3c4_22100 |
Gene Name | NA |
Pfam domain motif | Torsin |
Motif E-value | 0.0059 |
Motif start | 166 |
Motif end | 212 |
Protein seq | >Pp3c4_22100V3.1 MEVAMACTTMGPFKIEALAPKQSSFNSRISVVNLSNAGFFSIRNGNRHSQPHKFSGVRACLPVDSSSGDTQADEGLADAG SKNETKKLSNQSSWEATDVLGNDYLYRLGKESDNLNITVGARTGMIDSLFTGDFLGKEADIVFKYRQKVTRSFEHITGDY YIAPAFMDKVVTHIVKNYLAAQIDGKVPLILGVWGGKGQGKSFQTELIFKAMGIEPIIMSAGEMESEWAGEPGKLIRERY RAAHLVINNQGKMSCLMINDLDAGIGRFENTQMTVNNQMVVGTLMNLADNPNRVSVGQAWREADIVNRVPIIVTGNDFST IWAPLIRDGRMDKFYWQPTRDDLVKIVYQMYKKDGLSEADIGFIIDTFPNQALDFYGALRSRTYDKHVLEWVNEIGGAEQ IGPKLLRRKKGDAPLPEFIAPEQNVDDLIKAGYELVEEQNMVNNMKLSDEYMKKQTGPGGGLSISAS* |
CDS seq | >Pp3c4_22100V3.1 ATGGAGGTCGCCATGGCCTGCACTACTATGGGACCTTTTAAAATAGAAGCACTGGCACCAAAACAATCTTCGTTCAACAG CCGAATTTCAGTTGTGAATCTTTCCAATGCCGGTTTCTTCTCTATTCGCAATGGAAATCGCCATTCTCAACCCCATAAAT TCTCTGGAGTCCGTGCGTGCCTGCCAGTTGATTCTTCTTCAGGCGACACCCAAGCGGACGAAGGCTTAGCGGACGCTGGA TCCAAGAATGAGACCAAGAAGTTGTCGAATCAATCGTCGTGGGAAGCTACAGACGTGTTGGGCAATGACTACCTCTACCG CCTCGGCAAGGAATCGGACAATCTCAATATCACTGTGGGGGCGCGTACAGGAATGATCGACAGCCTCTTCACGGGAGATT TCTTGGGTAAAGAAGCGGACATCGTCTTCAAGTATCGCCAGAAAGTGACGCGTTCATTTGAGCATATTACAGGAGATTAC TACATCGCCCCTGCGTTTATGGATAAAGTGGTGACGCACATTGTCAAGAACTATCTGGCTGCACAAATTGACGGCAAAGT TCCTCTCATTTTGGGTGTCTGGGGAGGAAAGGGTCAAGGCAAGTCTTTTCAGACAGAGCTAATATTCAAGGCAATGGGTA TTGAACCCATTATCATGTCTGCCGGCGAGATGGAATCAGAATGGGCAGGAGAACCTGGTAAGCTGATTCGAGAACGTTAC CGAGCCGCACATCTTGTCATAAACAACCAGGGAAAAATGAGCTGTCTGATGATTAATGACCTCGATGCTGGAATAGGACG ATTTGAAAATACGCAAATGACGGTCAATAACCAGATGGTGGTTGGCACACTTATGAATTTAGCTGACAACCCCAATCGTG TGAGCGTTGGGCAGGCATGGCGAGAGGCTGATATTGTGAATCGTGTGCCAATCATTGTTACTGGGAATGACTTCTCTACA ATTTGGGCACCTCTGATTCGAGATGGTCGAATGGATAAATTCTACTGGCAGCCAACGAGGGATGATTTAGTCAAAATTGT GTACCAAATGTATAAGAAAGATGGTCTTAGTGAAGCTGATATTGGTTTCATCATCGACACATTCCCTAACCAAGCATTGG ACTTTTATGGCGCTCTCAGGTCGAGGACATACGATAAGCACGTCCTGGAGTGGGTCAACGAGATTGGAGGAGCTGAACAA ATAGGACCAAAGCTTCTTCGGCGTAAAAAAGGCGATGCACCTCTCCCAGAATTTATAGCACCAGAGCAAAACGTGGACGA TCTTATCAAGGCTGGTTATGAGCTTGTGGAAGAGCAGAACATGGTGAACAACATGAAGCTCTCAGATGAGTACATGAAAA AACAAACAGGTCCAGGGGGTGGTCTTTCTATTTCAGCTTCATAA |
Microexon DNA seq | GATAAAGTGG |
Microexon Amino Acid seq | DKVV |
Microexon-tag DNA Seq | TCATTTGAGCATATTACAGGAGATTACTACATCGCCCCTGCGTTTATGGATAAAGTGGTGACGCACATTGTCAAGAACTATCTGGCTGCACAAATTGACGGCAAAGTT |
Microexon-tag Amino Acid seq | SFEHITGDYYIAPAFMDKVVTHIVKNYLAAQIDGKV |
Transcript ID | Pp3c4_22100V3.3 |
Gene ID | Pp.19998 |
Gene Name | NA |
Pfam domain motif | Torsin |
Motif E-value | 0.0059 |
Motif start | 166 |
Motif end | 212 |
Protein seq | >Pp3c4_22100V3.3 MEVAMACTTMGPFKIEALAPKQSSFNSRISVVNLSNAGFFSIRNGNRHSQPHKFSGVRACLPVDSSSGDTQADEGLADAG SKNETKKLSNQSSWEATDVLGNDYLYRLGKESDNLNITVGARTGMIDSLFTGDFLGKEADIVFKYRQKVTRSFEHITGDY YIAPAFMDKVVTHIVKNYLAAQIDGKVPLILGVWGGKGQGKSFQTELIFKAMGIEPIIMSAGEMESEWAGEPGKLIRERY RAAHLVINNQGKMSCLMINDLDAGIGRFENTQMTVNNQMVVGTLMNLADNPNRVSVGQAWREADIVNRVPIIVTGNDFST IWAPLIRDGRMDKFYWQPTRDDLVKIVYQMYKKDGLSEADIGFIIDTFPNQALDFYGALRSRTYDKHVLEWVNEIGGAEQ IGPKLLRRKKGDAPLPEFIAPEQNVDDLIKAGYELVEEQNMVNNMKLSDEYMKKQTGPGGGLSISAS* |
CDS seq | >Pp3c4_22100V3.3 ATGGAGGTCGCCATGGCCTGCACTACTATGGGACCTTTTAAAATAGAAGCACTGGCACCAAAACAATCTTCGTTCAACAG CCGAATTTCAGTTGTGAATCTTTCCAATGCCGGTTTCTTCTCTATTCGCAATGGAAATCGCCATTCTCAACCCCATAAAT TCTCTGGAGTCCGTGCGTGCCTGCCAGTTGATTCTTCTTCAGGCGACACCCAAGCGGACGAAGGCTTAGCGGACGCTGGA TCCAAGAATGAGACCAAGAAGTTGTCGAATCAATCGTCGTGGGAAGCTACAGACGTGTTGGGCAATGACTACCTCTACCG CCTCGGCAAGGAATCGGACAATCTCAATATCACTGTGGGGGCGCGTACAGGAATGATCGACAGCCTCTTCACGGGAGATT TCTTGGGTAAAGAAGCGGACATCGTCTTCAAGTATCGCCAGAAAGTGACGCGTTCATTTGAGCATATTACAGGAGATTAC TACATCGCCCCTGCGTTTATGGATAAAGTGGTGACGCACATTGTCAAGAACTATCTGGCTGCACAAATTGACGGCAAAGT TCCTCTCATTTTGGGTGTCTGGGGAGGAAAGGGTCAAGGCAAGTCTTTTCAGACAGAGCTAATATTCAAGGCAATGGGTA TTGAACCCATTATCATGTCTGCCGGCGAGATGGAATCAGAATGGGCAGGAGAACCTGGTAAGCTGATTCGAGAACGTTAC CGAGCCGCACATCTTGTCATAAACAACCAGGGAAAAATGAGCTGTCTGATGATTAATGACCTCGATGCTGGAATAGGACG ATTTGAAAATACGCAAATGACGGTCAATAACCAGATGGTGGTTGGCACACTTATGAATTTAGCTGACAACCCCAATCGTG TGAGCGTTGGGCAGGCATGGCGAGAGGCTGATATTGTGAATCGTGTGCCAATCATTGTTACTGGGAATGACTTCTCTACA ATTTGGGCACCTCTGATTCGAGATGGTCGAATGGATAAATTCTACTGGCAGCCAACGAGGGATGATTTAGTCAAAATTGT GTACCAAATGTATAAGAAAGATGGTCTTAGTGAAGCTGATATTGGTTTCATCATCGACACATTCCCTAACCAAGCATTGG ACTTTTATGGCGCTCTCAGGTCGAGGACATACGATAAGCACGTCCTGGAGTGGGTCAACGAGATTGGAGGAGCTGAACAA ATAGGACCAAAGCTTCTTCGGCGTAAAAAAGGCGATGCACCTCTCCCAGAATTTATAGCACCAGAGCAAAACGTGGACGA TCTTATCAAGGCTGGTTATGAGCTTGTGGAAGAGCAGAACATGGTGAACAACATGAAGCTCTCAGATGAGTACATGAAAA AACAAACAGGTCCAGGGGGTGGTCTTTCTATTTCAGCTTCATAA |