
Microexon ID | Os_4:33578824-33578833:- |
Species | Oryza sativa | Coordinates | 4:33578824..33578833 |
Microexon Cluster ID | MEP23 |
Size | 10 |
Phase | 0 |
Pfam Domain Motif | AAA |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,10,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATAAAGTTG |
Microexon Amino Acid seq | DKVA |
Microexon-tag DNA Seq | ACGTTTGAGTACCTGCAAGGAGATTATTACATCGCACCCCTCTTCCTTGATAAAGTTGCATGTCATATTGTGAAGAACTACCTTGCACATATTCTTACTATCAAGATT |
Microexon-tag Amino Acid Seq | TFEYLQGDYYIAPLFLDKVACHIVKNYLAHILTIKI |
Microexon-tag spanning region | 33578327-33579003 |
Microexon-tag prediction score | 0.9607 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os04t0658300-01x |
Reference Transcript ID | Os04t0658300-01 |
Gene ID | Os04g0658300 |
Gene Name | NA |
Transcript ID | Os04t0658300-01 |
Protein ID | Os04t0658300-01 |
Gene ID | Os04g0658300 |
Gene Name | NA |
Pfam domain motif | DUF220 |
Motif E-value | 0.083 |
Motif start | 124 |
Motif end | 158 |
Protein seq | >Os04t0658300-01 MATATATSLASSAAHRRLPPSRSAASSILRAPNRGRLCPGSPSVLRASSSSPSSPQPTAGGDEGEEEEEGRRLSKQSSWE AKDSEGDDYLYRLGKEADNMNIAVGARSGIVDDLFVGNFLGKDSDIVFDYRQKATRTFEYLQGDYYIAPLFLDKVACHIV KNYLAHILTIKIPLILGIWGGKGQGKTFQTELIFRAMGVEPVIMSAGELESEKAGEPGRLIRDRYRTASQVIQNQGKMSV LMINDLDAGVGRFGNTQMTVNNQIVIGTLMNLADNPTRVSIGQKWRESDVTHRVPIIVTGNDFSTLYAPLIRDGRMEKFY WQPGREDIINIVHRMYIKDGLSFEDVSKVVDTFPNQALDFYGALRSRTYDRAILQWVEEIGGHEQLNEKLLKRKKGEELP TFIPPKTTVDALIESGDSLVKEQELIMNSKLSKEYMKNLDD* |
CDS seq | >Os04t0658300-01 ATGGCCACCGCCACCGCCACCTCCCTCGCCTCCTCCGCCGCGCACCGCCGCCTCCCGCCCTCGCGCTCAGCCGCTAGCTC CATCCTGAGAGCCCCCAACCGGGGCCGCCTCTGCCCCGGCTCCCCGTCGGTGCTCCGCGCGTCGTCCTCGTCTCCGTCGT CTCCCCAGCCCACCGCCGGCGGTGATGAGGGGGAGGAGGAGGAGGAGGGGCGGAGGCTGTCGAAGCAGTCGTCGTGGGAG GCGAAGGACTCCGAGGGGGATGACTACCTCTACCGCCTCGGGAAGGAGGCCGACAACATGAACATCGCCGTCGGCGCGCG GAGCGGCATCGTCGACGACCTCTTCGTCGGCAACTTCCTCGGCAAAGACTCGGATATTGTGTTCGATTACCGGCAGAAAG CGACCAGGACGTTTGAGTACCTGCAAGGAGATTATTACATCGCACCCCTCTTCCTTGATAAAGTTGCATGTCATATTGTG AAGAACTACCTTGCACATATTCTTACTATCAAGATTCCCCTTATACTTGGAATCTGGGGTGGAAAAGGCCAAGGGAAAAC ATTCCAGACTGAACTTATATTTAGAGCAATGGGTGTTGAACCTGTTATTATGTCTGCTGGAGAACTAGAATCTGAGAAAG CAGGAGAACCTGGGAGGCTTATACGTGACCGATACAGGACGGCTTCTCAAGTAATTCAAAACCAAGGGAAAATGAGTGTT TTGATGATCAATGACCTAGATGCTGGTGTTGGAAGATTTGGTAACACACAAATGACAGTAAATAATCAAATTGTGATTGG AACTTTAATGAACTTGGCGGATAATCCAACCAGGGTTAGCATTGGCCAGAAATGGAGAGAATCTGATGTAACACACAGAG TGCCAATAATAGTTACCGGAAATGATTTTTCGACACTGTATGCTCCCTTGATTCGTGATGGGAGGATGGAAAAGTTCTAT TGGCAGCCTGGCCGTGAAGATATAATTAACATTGTTCACCGCATGTATATAAAGGATGGTTTGTCTTTCGAGGATGTATC AAAAGTTGTAGACACTTTTCCAAACCAAGCTCTGGACTTTTATGGAGCTTTGAGATCCAGGACATACGATCGGGCAATCT TGCAGTGGGTAGAAGAGATTGGTGGTCATGAACAACTAAATGAAAAGCTTCTCAAGCGAAAGAAAGGAGAGGAGCTTCCA ACATTTATTCCTCCAAAGACCACTGTAGATGCGTTGATTGAATCTGGGGACTCTCTGGTGAAAGAGCAAGAACTGATAAT GAATTCGAAACTGTCAAAAGAATATATGAAGAATTTAGATGATTAG |
Microexon DNA seq | GATAAAGTTG |
Microexon Amino Acid seq | DKVA |
Microexon-tag DNA Seq | ACGTTTGAGTACCTGCAAGGAGATTATTACATCGCACCCCTCTTCCTTGATAAAGTTGCATGTCATATTGTGAAGAACTACCTTGCACATATTCTTACTATCAAGATT |
Microexon-tag Amino Acid seq | TFEYLQGDYYIAPLFLDKVACHIVKNYLAHILTIKI |
Transcript ID | Os04t0658300-01 |
Gene ID | Os.24449 |
Gene Name | NA |
Pfam domain motif | DUF220 |
Motif E-value | 0.083 |
Motif start | 124 |
Motif end | 158 |
Protein seq | >Os04t0658300-01 MATATATSLASSAAHRRLPPSRSAASSILRAPNRGRLCPGSPSVLRASSSSPSSPQPTAGGDEGEEEEEGRRLSKQSSWE AKDSEGDDYLYRLGKEADNMNIAVGARSGIVDDLFVGNFLGKDSDIVFDYRQKATRTFEYLQGDYYIAPLFLDKVACHIV KNYLAHILTIKIPLILGIWGGKGQGKTFQTELIFRAMGVEPVIMSAGELESEKAGEPGRLIRDRYRTASQVIQNQGKMSV LMINDLDAGVGRFGNTQMTVNNQIVIGTLMNLADNPTRVSIGQKWRESDVTHRVPIIVTGNDFSTLYAPLIRDGRMEKFY WQPGREDIINIVHRMYIKDGLSFEDVSKVVDTFPNQALDFYGALRSRTYDRAILQWVEEIGGHEQLNEKLLKRKKGEELP TFIPPKTTVDALIESGDSLVKEQELIMNSKLSKEYMKNLDD* |
CDS seq | >Os04t0658300-01 ATGGCCACCGCCACCGCCACCTCCCTCGCCTCCTCCGCCGCGCACCGCCGCCTCCCGCCCTCGCGCTCAGCCGCTAGCTC CATCCTGAGAGCCCCCAACCGGGGCCGCCTCTGCCCCGGCTCCCCGTCGGTGCTCCGCGCGTCGTCCTCGTCTCCGTCGT CTCCCCAGCCCACCGCCGGCGGTGATGAGGGGGAGGAGGAGGAGGAGGGGCGGAGGCTGTCGAAGCAGTCGTCGTGGGAG GCGAAGGACTCCGAGGGGGATGACTACCTCTACCGCCTCGGGAAGGAGGCCGACAACATGAACATCGCCGTCGGCGCGCG GAGCGGCATCGTCGACGACCTCTTCGTCGGCAACTTCCTCGGCAAAGACTCGGATATTGTGTTCGATTACCGGCAGAAAG CGACCAGGACGTTTGAGTACCTGCAAGGAGATTATTACATCGCACCCCTCTTCCTTGATAAAGTTGCATGTCATATTGTG AAGAACTACCTTGCACATATTCTTACTATCAAGATTCCCCTTATACTTGGAATCTGGGGTGGAAAAGGCCAAGGGAAAAC ATTCCAGACTGAACTTATATTTAGAGCAATGGGTGTTGAACCTGTTATTATGTCTGCTGGAGAACTAGAATCTGAGAAAG CAGGAGAACCTGGGAGGCTTATACGTGACCGATACAGGACGGCTTCTCAAGTAATTCAAAACCAAGGGAAAATGAGTGTT TTGATGATCAATGACCTAGATGCTGGTGTTGGAAGATTTGGTAACACACAAATGACAGTAAATAATCAAATTGTGATTGG AACTTTAATGAACTTGGCGGATAATCCAACCAGGGTTAGCATTGGCCAGAAATGGAGAGAATCTGATGTAACACACAGAG TGCCAATAATAGTTACCGGAAATGATTTTTCGACACTGTATGCTCCCTTGATTCGTGATGGGAGGATGGAAAAGTTCTAT TGGCAGCCTGGCCGTGAAGATATAATTAACATTGTTCACCGCATGTATATAAAGGATGGTTTGTCTTTCGAGGATGTATC AAAAGTTGTAGACACTTTTCCAAACCAAGCTCTGGACTTTTATGGAGCTTTGAGATCCAGGACATACGATCGGGCAATCT TGCAGTGGGTAGAAGAGATTGGTGGTCATGAACAACTAAATGAAAAGCTTCTCAAGCGAAAGAAAGGAGAGGAGCTTCCA ACATTTATTCCTCCAAAGACCACTGTAGATGCGTTGATTGAATCTGGGGACTCTCTGGTGAAAGAGCAAGAACTGATAAT GAATTCGAAACTGTCAAAAGAATATATGAAGAATTTAGATGATTAG |