
Microexon ID | Ha_8:143271514-143271523:- |
Species | Helianthus annuus | Coordinates | 8:143271514..143271523 |
Microexon Cluster ID | MEP23 |
Size | 10 |
Phase | 0 |
Pfam Domain Motif | AAA |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,10,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATAAAGTTG |
Microexon Amino Acid seq | DKVV |
Microexon-tag DNA Seq | TCGTTTGAGTACCTCCAGGGTGATTATTACATTGCTCCAGCTTTTATGGATAAAGTTGTGGTCCACATTGTGAAGAACTATCTTGCTCATCTTCTTAATACCAATGTT |
Microexon-tag Amino Acid Seq | SFEYLQGDYYIAPAFMDKVVVHIVKNYLAHLLNTNV |
Microexon-tag spanning region | 143271246-143271656 |
Microexon-tag prediction score | 0.9802 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG19601x |
Reference Transcript ID | OTG19601 |
Gene ID | HannXRQ_Chr08g0235911 |
Gene Name | NA |
Transcript ID | OTG19601 |
Protein ID | OTG19601 |
Gene ID | HannXRQ_Chr08g0235911 |
Gene Name | NA |
Pfam domain motif | Torsin |
Motif E-value | 0.0026 |
Motif start | 148 |
Motif end | 194 |
Protein seq | >OTG19601 MAVHCNFTSTDLSSLTLTNRPHFTYKTSSLSPKPLSTRKLNRSLVRSIATDSNGGDGATSPEVAGKKKRLSEQSAWEATD AEGNDYLYRLGKESENMNIAVGARAGVIDDLFVGDFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPAFMDKVVVHIVKNY LAHLLNTNVPLILGVWGGKGQGKTFQTELIFQAMGILPVIMSAGELESERAGEPGRLIRDRYRTASQVVQNQGKMSCLMI NDIDAGLGRFGNTQMTVNNQIVVGTLMNLSDNPTRVSIGQDWRESDITHRIPIIVTGNDFSTLYAPLVRDGRMDKFYWQP TMDDIINIVNRMYEKDGLSKKDVESIVTTFPNQALDFYGALRSRTYDSAILKWVNDIGGPETVGSKLLRRKRDENLPVFV PPKQTVESLLESGYSLIKEQQLIMESKLSKEYMKNMDD* |
CDS seq | >OTG19601 ATGGCGGTTCACTGCAACTTCACAAGCACCGATCTCTCATCACTAACCCTAACCAACCGCCCACACTTCACCTACAAGAC CTCCTCTCTCTCTCCAAAACCTCTCTCCACTCGCAAACTTAACCGATCTCTCGTCCGTTCAATCGCCACCGATTCCAACG GCGGCGATGGCGCAACGTCGCCGGAAGTTGCAGGTAAGAAGAAGCGGTTATCGGAGCAGTCTGCGTGGGAGGCGACGGAT GCGGAAGGGAATGATTACTTGTATAGGCTTGGAAAAGAGTCGGAGAATATGAATATTGCTGTTGGAGCTAGGGCTGGAGT TATTGATGATCTGTTTGTTGGAGATTTCCTCGGAAAGGACTCGGATATTGTGTTTGATTATCGTCAAAAAGTAACCAGGT CGTTTGAGTACCTCCAGGGTGATTATTACATTGCTCCAGCTTTTATGGATAAAGTTGTGGTCCACATTGTGAAGAACTAT CTTGCTCATCTTCTTAATACCAATGTTCCGTTGATTTTAGGCGTTTGGGGAGGAAAAGGGCAAGGAAAAACATTTCAAAC TGAACTTATTTTTCAGGCTATGGGAATTTTGCCTGTGATCATGTCTGCTGGAGAATTGGAATCAGAGAGAGCTGGGGAAC CAGGAAGATTGATACGTGATCGGTATCGTACTGCATCTCAAGTGGTTCAAAATCAGGGGAAAATGAGCTGTTTGATGATC AATGATATCGATGCGGGTCTTGGTAGATTTGGAAACACTCAGATGACTGTCAACAATCAAATAGTTGTTGGCACACTGAT GAATTTGTCGGATAATCCTACGAGAGTTAGCATTGGACAAGATTGGCGGGAATCAGATATTACACACAGAATTCCGATTA TTGTTACGGGAAATGATTTTTCAACTTTATATGCCCCGTTGGTTCGTGATGGGCGGATGGACAAGTTCTACTGGCAGCCT ACTATGGACGATATCATAAATATTGTGAACAGAATGTATGAGAAAGATGGTTTATCAAAGAAAGATGTTGAAAGCATAGT GACAACATTTCCAAATCAAGCCTTGGACTTTTATGGAGCCCTTAGGTCCCGAACATATGACAGCGCAATCTTGAAGTGGG TTAATGATATCGGTGGTCCTGAAACTGTTGGAAGCAAACTCCTCAGACGAAAAAGGGACGAAAATCTCCCTGTGTTTGTA CCCCCAAAGCAAACGGTGGAATCTTTACTTGAATCCGGCTATTCACTCATCAAAGAACAGCAGTTGATAATGGAAAGTAA ACTTTCAAAGGAGTACATGAAGAACATGGATGATTAA |
Microexon DNA seq | GATAAAGTTG |
Microexon Amino Acid seq | DKVV |
Microexon-tag DNA Seq | TCGTTTGAGTACCTCCAGGGTGATTATTACATTGCTCCAGCTTTTATGGATAAAGTTGTGGTCCACATTGTGAAGAACTATCTTGCTCATCTTCTTAATACCAATGTT |
Microexon-tag Amino Acid seq | SFEYLQGDYYIAPAFMDKVVVHIVKNYLAHLLNTNV |
Transcript ID | Ha.54316.1 |
Gene ID | Ha.54316 |
Gene Name | NA |
Pfam domain motif | Torsin |
Motif E-value | 0.0026 |
Motif start | 148 |
Motif end | 194 |
Protein seq | >Ha.54316.1 MAVHCNFTSTDLSSLTLTNRPHFTYKTSSLSPKPLSTRKLNRSLVRSIATDSNGGDGATSPEVAGKKKRLSEQSAWEATD AEGNDYLYRLGKESENMNIAVGARAGVIDDLFVGDFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPAFMDKVVVHIVKNY LAHLLNTNVPLILGVWGGKGQGKTFQTELIFQAMGILPVIMSAGELESERAGEPGRLIRDRYRTASQVVQNQGKMSCLMI NDIDAGLGRFGNTQMTVNNQIVVGTLMNLSDNPTRVSIGQDWRESDITHRIPIIVTGNDFSTLYAPLVRDGRMDKFYWQP TMDDIINIVNRMYEKDGLSKKDVESIVTTFPNQALDFYGALRSRTYDSAILKWVNDIGGPETVGSKLLRRKRDENLPVFV PPKQTVESLLESGYSLIKEQQLIMESKLSKEYMKNMDD* |
CDS seq | >Ha.54316.1 ATGGCGGTTCACTGCAACTTCACAAGCACCGATCTCTCATCACTAACCCTAACCAACCGCCCACACTTCACCTACAAGAC CTCCTCTCTCTCTCCAAAACCTCTCTCCACTCGCAAACTTAACCGATCTCTCGTCCGTTCAATCGCCACCGATTCCAACG GCGGCGATGGCGCAACGTCGCCGGAAGTTGCAGGTAAGAAGAAGCGGTTATCGGAGCAGTCTGCGTGGGAGGCGACGGAT GCGGAAGGGAATGATTACTTGTATAGGCTTGGAAAAGAGTCGGAGAATATGAATATTGCTGTTGGAGCTAGGGCTGGAGT TATTGATGATCTGTTTGTTGGAGATTTCCTCGGAAAGGACTCGGATATTGTGTTTGATTATCGTCAAAAAGTAACCAGGT CGTTTGAGTACCTCCAGGGTGATTATTACATTGCTCCAGCTTTTATGGATAAAGTTGTGGTCCACATTGTGAAGAACTAT CTTGCTCATCTTCTTAATACCAATGTTCCGTTGATTTTAGGCGTTTGGGGAGGAAAAGGGCAAGGAAAAACATTTCAAAC TGAACTTATTTTTCAGGCTATGGGAATTTTGCCTGTGATCATGTCTGCTGGAGAATTGGAATCAGAGAGAGCTGGGGAAC CAGGAAGATTGATACGTGATCGGTATCGTACTGCATCTCAAGTGGTTCAAAATCAGGGGAAAATGAGCTGTTTGATGATC AATGATATCGATGCGGGTCTTGGTAGATTTGGAAACACTCAGATGACTGTCAACAATCAAATAGTTGTTGGCACACTGAT GAATTTGTCGGATAATCCTACGAGAGTTAGCATTGGACAAGATTGGCGGGAATCAGATATTACACACAGAATTCCGATTA TTGTTACGGGAAATGATTTTTCAACTTTATATGCCCCGTTGGTTCGTGATGGGCGGATGGACAAGTTCTACTGGCAGCCT ACTATGGACGATATCATAAATATTGTGAACAGAATGTATGAGAAAGATGGTTTATCAAAGAAAGATGTTGAAAGCATAGT GACAACATTTCCAAATCAAGCCTTGGACTTTTATGGAGCCCTTAGGTCCCGAACATATGACAGCGCAATCTTGAAGTGGG TTAATGATATCGGTGGTCCTGAAACTGTTGGAAGCAAACTCCTCAGACGAAAAAGGGACGAAAATCTCCCTGTGTTTGTA CCCCCAAAGCAAACGGTGGAATCTTTACTTGAATCCGGCTATTCACTCATCAAAGAACAGCAGTTGATAATGGAAAGTAA ACTTTCAAAGGAGTACATGAAGAACATGGATGATTAA |