Microexon ID Ha_8:143271514-143271523:-
Species Helianthus annuus
Coordinates 8:143271514..143271523
Microexon Cluster ID MEP23
Size 10
Phase 0
Pfam Domain Motif AAA
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,10,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GATAAAGTTG
Microexon Amino Acid seq DKVV
Microexon-tag DNA Seq TCGTTTGAGTACCTCCAGGGTGATTATTACATTGCTCCAGCTTTTATGGATAAAGTTGTGGTCCACATTGTGAAGAACTATCTTGCTCATCTTCTTAATACCAATGTT
Microexon-tag Amino Acid Seq SFEYLQGDYYIAPAFMDKVVVHIVKNYLAHLLNTNV
Microexon-tag spanning region143271246-143271656
Microexon-tag prediction score0.9802
Overlapped with the annotated transcript (%) 100
New Transcript ID OTG19601x
Reference Transcript ID OTG19601
Gene ID HannXRQ_Chr08g0235911
Gene Name NA
Transcript ID OTG19601
Protein ID OTG19601
Gene ID HannXRQ_Chr08g0235911
Gene Name NA
Pfam domain motif Torsin
Motif E-value 0.0026
Motif start 148
Motif end 194
Protein seq >OTG19601
MAVHCNFTSTDLSSLTLTNRPHFTYKTSSLSPKPLSTRKLNRSLVRSIATDSNGGDGATSPEVAGKKKRLSEQSAWEATD
AEGNDYLYRLGKESENMNIAVGARAGVIDDLFVGDFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPAFMDKVVVHIVKNY
LAHLLNTNVPLILGVWGGKGQGKTFQTELIFQAMGILPVIMSAGELESERAGEPGRLIRDRYRTASQVVQNQGKMSCLMI
NDIDAGLGRFGNTQMTVNNQIVVGTLMNLSDNPTRVSIGQDWRESDITHRIPIIVTGNDFSTLYAPLVRDGRMDKFYWQP
TMDDIINIVNRMYEKDGLSKKDVESIVTTFPNQALDFYGALRSRTYDSAILKWVNDIGGPETVGSKLLRRKRDENLPVFV
PPKQTVESLLESGYSLIKEQQLIMESKLSKEYMKNMDD*
CDS seq >OTG19601
ATGGCGGTTCACTGCAACTTCACAAGCACCGATCTCTCATCACTAACCCTAACCAACCGCCCACACTTCACCTACAAGAC
CTCCTCTCTCTCTCCAAAACCTCTCTCCACTCGCAAACTTAACCGATCTCTCGTCCGTTCAATCGCCACCGATTCCAACG
GCGGCGATGGCGCAACGTCGCCGGAAGTTGCAGGTAAGAAGAAGCGGTTATCGGAGCAGTCTGCGTGGGAGGCGACGGAT
GCGGAAGGGAATGATTACTTGTATAGGCTTGGAAAAGAGTCGGAGAATATGAATATTGCTGTTGGAGCTAGGGCTGGAGT
TATTGATGATCTGTTTGTTGGAGATTTCCTCGGAAAGGACTCGGATATTGTGTTTGATTATCGTCAAAAAGTAACCAGGT
CGTTTGAGTACCTCCAGGGTGATTATTACATTGCTCCAGCTTTTATGGATAAAGTTGTGGTCCACATTGTGAAGAACTAT
CTTGCTCATCTTCTTAATACCAATGTTCCGTTGATTTTAGGCGTTTGGGGAGGAAAAGGGCAAGGAAAAACATTTCAAAC
TGAACTTATTTTTCAGGCTATGGGAATTTTGCCTGTGATCATGTCTGCTGGAGAATTGGAATCAGAGAGAGCTGGGGAAC
CAGGAAGATTGATACGTGATCGGTATCGTACTGCATCTCAAGTGGTTCAAAATCAGGGGAAAATGAGCTGTTTGATGATC
AATGATATCGATGCGGGTCTTGGTAGATTTGGAAACACTCAGATGACTGTCAACAATCAAATAGTTGTTGGCACACTGAT
GAATTTGTCGGATAATCCTACGAGAGTTAGCATTGGACAAGATTGGCGGGAATCAGATATTACACACAGAATTCCGATTA
TTGTTACGGGAAATGATTTTTCAACTTTATATGCCCCGTTGGTTCGTGATGGGCGGATGGACAAGTTCTACTGGCAGCCT
ACTATGGACGATATCATAAATATTGTGAACAGAATGTATGAGAAAGATGGTTTATCAAAGAAAGATGTTGAAAGCATAGT
GACAACATTTCCAAATCAAGCCTTGGACTTTTATGGAGCCCTTAGGTCCCGAACATATGACAGCGCAATCTTGAAGTGGG
TTAATGATATCGGTGGTCCTGAAACTGTTGGAAGCAAACTCCTCAGACGAAAAAGGGACGAAAATCTCCCTGTGTTTGTA
CCCCCAAAGCAAACGGTGGAATCTTTACTTGAATCCGGCTATTCACTCATCAAAGAACAGCAGTTGATAATGGAAAGTAA
ACTTTCAAAGGAGTACATGAAGAACATGGATGATTAA
Microexon DNA seq GATAAAGTTG
Microexon Amino Acid seq DKVV
Microexon-tag DNA Seq TCGTTTGAGTACCTCCAGGGTGATTATTACATTGCTCCAGCTTTTATGGATAAAGTTGTGGTCCACATTGTGAAGAACTATCTTGCTCATCTTCTTAATACCAATGTT
Microexon-tag Amino Acid seq SFEYLQGDYYIAPAFMDKVVVHIVKNYLAHLLNTNV
Transcript ID Ha.54316.1
Gene ID Ha.54316
Gene Name NA
Pfam domain motif Torsin
Motif E-value 0.0026
Motif start 148
Motif end 194
Protein seq >Ha.54316.1
MAVHCNFTSTDLSSLTLTNRPHFTYKTSSLSPKPLSTRKLNRSLVRSIATDSNGGDGATSPEVAGKKKRLSEQSAWEATD
AEGNDYLYRLGKESENMNIAVGARAGVIDDLFVGDFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPAFMDKVVVHIVKNY
LAHLLNTNVPLILGVWGGKGQGKTFQTELIFQAMGILPVIMSAGELESERAGEPGRLIRDRYRTASQVVQNQGKMSCLMI
NDIDAGLGRFGNTQMTVNNQIVVGTLMNLSDNPTRVSIGQDWRESDITHRIPIIVTGNDFSTLYAPLVRDGRMDKFYWQP
TMDDIINIVNRMYEKDGLSKKDVESIVTTFPNQALDFYGALRSRTYDSAILKWVNDIGGPETVGSKLLRRKRDENLPVFV
PPKQTVESLLESGYSLIKEQQLIMESKLSKEYMKNMDD*
CDS seq >Ha.54316.1
ATGGCGGTTCACTGCAACTTCACAAGCACCGATCTCTCATCACTAACCCTAACCAACCGCCCACACTTCACCTACAAGAC
CTCCTCTCTCTCTCCAAAACCTCTCTCCACTCGCAAACTTAACCGATCTCTCGTCCGTTCAATCGCCACCGATTCCAACG
GCGGCGATGGCGCAACGTCGCCGGAAGTTGCAGGTAAGAAGAAGCGGTTATCGGAGCAGTCTGCGTGGGAGGCGACGGAT
GCGGAAGGGAATGATTACTTGTATAGGCTTGGAAAAGAGTCGGAGAATATGAATATTGCTGTTGGAGCTAGGGCTGGAGT
TATTGATGATCTGTTTGTTGGAGATTTCCTCGGAAAGGACTCGGATATTGTGTTTGATTATCGTCAAAAAGTAACCAGGT
CGTTTGAGTACCTCCAGGGTGATTATTACATTGCTCCAGCTTTTATGGATAAAGTTGTGGTCCACATTGTGAAGAACTAT
CTTGCTCATCTTCTTAATACCAATGTTCCGTTGATTTTAGGCGTTTGGGGAGGAAAAGGGCAAGGAAAAACATTTCAAAC
TGAACTTATTTTTCAGGCTATGGGAATTTTGCCTGTGATCATGTCTGCTGGAGAATTGGAATCAGAGAGAGCTGGGGAAC
CAGGAAGATTGATACGTGATCGGTATCGTACTGCATCTCAAGTGGTTCAAAATCAGGGGAAAATGAGCTGTTTGATGATC
AATGATATCGATGCGGGTCTTGGTAGATTTGGAAACACTCAGATGACTGTCAACAATCAAATAGTTGTTGGCACACTGAT
GAATTTGTCGGATAATCCTACGAGAGTTAGCATTGGACAAGATTGGCGGGAATCAGATATTACACACAGAATTCCGATTA
TTGTTACGGGAAATGATTTTTCAACTTTATATGCCCCGTTGGTTCGTGATGGGCGGATGGACAAGTTCTACTGGCAGCCT
ACTATGGACGATATCATAAATATTGTGAACAGAATGTATGAGAAAGATGGTTTATCAAAGAAAGATGTTGAAAGCATAGT
GACAACATTTCCAAATCAAGCCTTGGACTTTTATGGAGCCCTTAGGTCCCGAACATATGACAGCGCAATCTTGAAGTGGG
TTAATGATATCGGTGGTCCTGAAACTGTTGGAAGCAAACTCCTCAGACGAAAAAGGGACGAAAATCTCCCTGTGTTTGTA
CCCCCAAAGCAAACGGTGGAATCTTTACTTGAATCCGGCTATTCACTCATCAAAGAACAGCAGTTGATAATGGAAAGTAA
ACTTTCAAAGGAGTACATGAAGAACATGGATGATTAA