
Microexon ID | At_1:27496139-27496148:- |
Species | Arabidopsis thaliana | Coordinates | 1:27496139..27496148 |
Microexon Cluster ID | MEP23 |
Size | 10 |
Phase | 0 |
Pfam Domain Motif | AAA |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,10,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GATAAAGTTG |
Microexon Amino Acid seq | DKVA |
Microexon-tag DNA Seq | TCCTTTGAACATCTTCAAGGAGATTATTACATTGCTCCATCGTTTCTGGATAAAGTTGCGGTCCACATTGTGAAGAACTACCTTGCTCCTTCTCTAAATATAAAAATC |
Microexon-tag Amino Acid Seq | SFEHLQGDYYIAPSFLDKVAVHIVKNYLAPSLNIKI |
Microexon-tag spanning region | 27495910-27496352 |
Microexon-tag prediction score | 0.9536 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT1G73110.1x |
Reference Transcript ID | AT1G73110.1 |
Gene ID | AT1G73110 |
Gene Name | NA |
Transcript ID | AT1G73110.1 |
Protein ID | AT1G73110.1 |
Gene ID | AT1G73110 |
Gene Name | NA |
Pfam domain motif | Torsin |
Motif E-value | 0.027 |
Motif start | 143 |
Motif end | 188 |
Protein seq | >AT1G73110.1 MALANISLRFKFPPLQSSSSSSSSFNATLINTRKLSSIVCSKPSSNDGGKVANDDGGAKPRKKLSEQSSWEVKDSEGKDY LYRLGAESDNVNIAVGARSGMIDDVFIGDFLGKDSDIVFDYRQKATRSFEHLQGDYYIAPSFLDKVAVHIVKNYLAPSLN IKIPLILGIWGGKGQGKTFQTELIFKTMGVEPVIMSAGELESDRAGEPGRLIRDRYRTASQVIQNQGKMSVLMINDIDAG LGRFGETQMTVNNQIVVGTLMNLADNPTRVSVGQEWREADMVNRVPLIVTGNDFSTLYAPLIREGRMEKFYWQPTREDIV NIVSRMYEKDGISRKDVISIVDKFPNQALDFYGALRSRTYDRSILKWVDEAGGMETLGKVLLRRKKTQEVPQFTAPEQTV EALLESGYSLINEQKLIMETKLSKEYMKNMDD* |
CDS seq | >AT1G73110.1 ATGGCGCTTGCAAACATATCTCTGCGTTTCAAGTTTCCACCTTTACAATCTTCTTCTTCTTCTTCTTCCTCGTTCAATGC TACTTTAATCAATACCAGAAAACTCTCTTCAATCGTTTGCTCGAAACCCTCCTCTAATGACGGCGGCAAAGTGGCTAATG ACGATGGTGGCGCAAAGCCGCGGAAGAAGTTGTCGGAGCAATCGTCATGGGAAGTTAAAGATTCAGAAGGGAAGGATTAT CTCTATAGGCTTGGCGCGGAATCGGATAATGTTAACATAGCCGTTGGGGCACGAAGCGGCATGATCGATGATGTATTCAT TGGAGACTTCCTTGGAAAAGATTCTGATATTGTGTTTGATTACCGTCAGAAGGCGACGAGGTCCTTTGAACATCTTCAAG GAGATTATTACATTGCTCCATCGTTTCTGGATAAAGTTGCGGTCCACATTGTGAAGAACTACCTTGCTCCTTCTCTAAAT ATAAAAATCCCATTGATTTTAGGTATATGGGGAGGTAAAGGACAAGGCAAAACATTTCAGACTGAACTTATATTCAAAAC AATGGGAGTTGAACCAGTTATAATGTCTGCAGGAGAGTTGGAATCTGATAGAGCTGGTGAACCGGGGAGACTCATACGTG ACCGCTATCGAACAGCTTCACAAGTCATTCAGAATCAAGGAAAGATGAGTGTTCTCATGATCAATGATATTGATGCTGGC CTTGGTAGATTTGGGGAAACGCAAATGACAGTAAACAACCAGATAGTTGTTGGTACCCTGATGAATCTTGCGGATAATCC TACAAGGGTAAGTGTAGGACAAGAATGGAGAGAAGCTGACATGGTAAACAGAGTTCCTCTAATTGTCACAGGGAACGATT TCTCTACACTGTATGCTCCACTGATCCGTGAAGGAAGAATGGAGAAGTTCTACTGGCAGCCAACTCGTGAAGATATCGTA AACATTGTTAGCAGAATGTACGAGAAAGATGGTATATCGCGGAAAGATGTTATAAGCATTGTAGATAAGTTTCCAAATCA AGCACTTGACTTCTATGGAGCTTTGAGGTCACGCACATATGATAGGTCTATCCTCAAGTGGGTAGATGAAGCTGGAGGAA TGGAGACTCTAGGGAAAGTTCTTCTCAGACGTAAAAAGACCCAAGAGGTTCCTCAATTCACTGCCCCTGAGCAAACGGTG GAAGCATTGCTGGAATCAGGGTACTCACTCATAAATGAACAGAAACTTATTATGGAAACAAAGCTTTCCAAGGAGTACAT GAAGAACATGGACGATTGA |
Microexon DNA seq | GATAAAGTTG |
Microexon Amino Acid seq | DKVA |
Microexon-tag DNA Seq | TCCTTTGAACATCTTCAAGGAGATTATTACATTGCTCCATCGTTTCTGGATAAAGTTGCGGTCCACATTGTGAAGAACTACCTTGCTCCTTCTCTAAATATAAAAATC |
Microexon-tag Amino Acid seq | SFEHLQGDYYIAPSFLDKVAVHIVKNYLAPSLNIKI |
Transcript ID | AT1G73110.1 |
Gene ID | At.6528 |
Gene Name | NA |
Pfam domain motif | Torsin |
Motif E-value | 0.027 |
Motif start | 143 |
Motif end | 188 |
Protein seq | >AT1G73110.1 MALANISLRFKFPPLQSSSSSSSSFNATLINTRKLSSIVCSKPSSNDGGKVANDDGGAKPRKKLSEQSSWEVKDSEGKDY LYRLGAESDNVNIAVGARSGMIDDVFIGDFLGKDSDIVFDYRQKATRSFEHLQGDYYIAPSFLDKVAVHIVKNYLAPSLN IKIPLILGIWGGKGQGKTFQTELIFKTMGVEPVIMSAGELESDRAGEPGRLIRDRYRTASQVIQNQGKMSVLMINDIDAG LGRFGETQMTVNNQIVVGTLMNLADNPTRVSVGQEWREADMVNRVPLIVTGNDFSTLYAPLIREGRMEKFYWQPTREDIV NIVSRMYEKDGISRKDVISIVDKFPNQALDFYGALRSRTYDRSILKWVDEAGGMETLGKVLLRRKKTQEVPQFTAPEQTV EALLESGYSLINEQKLIMETKLSKEYMKNMDD* |
CDS seq | >AT1G73110.1 ATGGCGCTTGCAAACATATCTCTGCGTTTCAAGTTTCCACCTTTACAATCTTCTTCTTCTTCTTCTTCCTCGTTCAATGC TACTTTAATCAATACCAGAAAACTCTCTTCAATCGTTTGCTCGAAACCCTCCTCTAATGACGGCGGCAAAGTGGCTAATG ACGATGGTGGCGCAAAGCCGCGGAAGAAGTTGTCGGAGCAATCGTCATGGGAAGTTAAAGATTCAGAAGGGAAGGATTAT CTCTATAGGCTTGGCGCGGAATCGGATAATGTTAACATAGCCGTTGGGGCACGAAGCGGCATGATCGATGATGTATTCAT TGGAGACTTCCTTGGAAAAGATTCTGATATTGTGTTTGATTACCGTCAGAAGGCGACGAGGTCCTTTGAACATCTTCAAG GAGATTATTACATTGCTCCATCGTTTCTGGATAAAGTTGCGGTCCACATTGTGAAGAACTACCTTGCTCCTTCTCTAAAT ATAAAAATCCCATTGATTTTAGGTATATGGGGAGGTAAAGGACAAGGCAAAACATTTCAGACTGAACTTATATTCAAAAC AATGGGAGTTGAACCAGTTATAATGTCTGCAGGAGAGTTGGAATCTGATAGAGCTGGTGAACCGGGGAGACTCATACGTG ACCGCTATCGAACAGCTTCACAAGTCATTCAGAATCAAGGAAAGATGAGTGTTCTCATGATCAATGATATTGATGCTGGC CTTGGTAGATTTGGGGAAACGCAAATGACAGTAAACAACCAGATAGTTGTTGGTACCCTGATGAATCTTGCGGATAATCC TACAAGGGTAAGTGTAGGACAAGAATGGAGAGAAGCTGACATGGTAAACAGAGTTCCTCTAATTGTCACAGGGAACGATT TCTCTACACTGTATGCTCCACTGATCCGTGAAGGAAGAATGGAGAAGTTCTACTGGCAGCCAACTCGTGAAGATATCGTA AACATTGTTAGCAGAATGTACGAGAAAGATGGTATATCGCGGAAAGATGTTATAAGCATTGTAGATAAGTTTCCAAATCA AGCACTTGACTTCTATGGAGCTTTGAGGTCACGCACATATGATAGGTCTATCCTCAAGTGGGTAGATGAAGCTGGAGGAA TGGAGACTCTAGGGAAAGTTCTTCTCAGACGTAAAAAGACCCAAGAGGTTCCTCAATTCACTGCCCCTGAGCAAACGGTG GAAGCATTGCTGGAATCAGGGTACTCACTCATAAATGAACAGAAACTTATTATGGAAACAAAGCTTTCCAAGGAGTACAT GAAGAACATGGACGATTGA |