Microexon ID At_1:27496139-27496148:-
Species Arabidopsis thaliana
Coordinates 1:27496139..27496148
Microexon Cluster ID MEP23
Size 10
Phase 0
Pfam Domain Motif AAA
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,10,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TCVTTTGARYAYCTKCARGGMGATTAYTACATYGCTCCTSYYTTCMTGGATAAAGTTGYRKKYCACATTGTGAAGAACTAYMTTGCTMATCTTCTYAATRYYAAARTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GATAAAGTTG
Microexon Amino Acid seq DKVA
Microexon-tag DNA Seq TCCTTTGAACATCTTCAAGGAGATTATTACATTGCTCCATCGTTTCTGGATAAAGTTGCGGTCCACATTGTGAAGAACTACCTTGCTCCTTCTCTAAATATAAAAATC
Microexon-tag Amino Acid Seq SFEHLQGDYYIAPSFLDKVAVHIVKNYLAPSLNIKI
Microexon-tag spanning region27495910-27496352
Microexon-tag prediction score0.9536
Overlapped with the annotated transcript (%) 100
New Transcript ID AT1G73110.1x
Reference Transcript ID AT1G73110.1
Gene ID AT1G73110
Gene Name NA
Transcript ID AT1G73110.1
Protein ID AT1G73110.1
Gene ID AT1G73110
Gene Name NA
Pfam domain motif Torsin
Motif E-value 0.027
Motif start 143
Motif end 188
Protein seq >AT1G73110.1
MALANISLRFKFPPLQSSSSSSSSFNATLINTRKLSSIVCSKPSSNDGGKVANDDGGAKPRKKLSEQSSWEVKDSEGKDY
LYRLGAESDNVNIAVGARSGMIDDVFIGDFLGKDSDIVFDYRQKATRSFEHLQGDYYIAPSFLDKVAVHIVKNYLAPSLN
IKIPLILGIWGGKGQGKTFQTELIFKTMGVEPVIMSAGELESDRAGEPGRLIRDRYRTASQVIQNQGKMSVLMINDIDAG
LGRFGETQMTVNNQIVVGTLMNLADNPTRVSVGQEWREADMVNRVPLIVTGNDFSTLYAPLIREGRMEKFYWQPTREDIV
NIVSRMYEKDGISRKDVISIVDKFPNQALDFYGALRSRTYDRSILKWVDEAGGMETLGKVLLRRKKTQEVPQFTAPEQTV
EALLESGYSLINEQKLIMETKLSKEYMKNMDD*
CDS seq >AT1G73110.1
ATGGCGCTTGCAAACATATCTCTGCGTTTCAAGTTTCCACCTTTACAATCTTCTTCTTCTTCTTCTTCCTCGTTCAATGC
TACTTTAATCAATACCAGAAAACTCTCTTCAATCGTTTGCTCGAAACCCTCCTCTAATGACGGCGGCAAAGTGGCTAATG
ACGATGGTGGCGCAAAGCCGCGGAAGAAGTTGTCGGAGCAATCGTCATGGGAAGTTAAAGATTCAGAAGGGAAGGATTAT
CTCTATAGGCTTGGCGCGGAATCGGATAATGTTAACATAGCCGTTGGGGCACGAAGCGGCATGATCGATGATGTATTCAT
TGGAGACTTCCTTGGAAAAGATTCTGATATTGTGTTTGATTACCGTCAGAAGGCGACGAGGTCCTTTGAACATCTTCAAG
GAGATTATTACATTGCTCCATCGTTTCTGGATAAAGTTGCGGTCCACATTGTGAAGAACTACCTTGCTCCTTCTCTAAAT
ATAAAAATCCCATTGATTTTAGGTATATGGGGAGGTAAAGGACAAGGCAAAACATTTCAGACTGAACTTATATTCAAAAC
AATGGGAGTTGAACCAGTTATAATGTCTGCAGGAGAGTTGGAATCTGATAGAGCTGGTGAACCGGGGAGACTCATACGTG
ACCGCTATCGAACAGCTTCACAAGTCATTCAGAATCAAGGAAAGATGAGTGTTCTCATGATCAATGATATTGATGCTGGC
CTTGGTAGATTTGGGGAAACGCAAATGACAGTAAACAACCAGATAGTTGTTGGTACCCTGATGAATCTTGCGGATAATCC
TACAAGGGTAAGTGTAGGACAAGAATGGAGAGAAGCTGACATGGTAAACAGAGTTCCTCTAATTGTCACAGGGAACGATT
TCTCTACACTGTATGCTCCACTGATCCGTGAAGGAAGAATGGAGAAGTTCTACTGGCAGCCAACTCGTGAAGATATCGTA
AACATTGTTAGCAGAATGTACGAGAAAGATGGTATATCGCGGAAAGATGTTATAAGCATTGTAGATAAGTTTCCAAATCA
AGCACTTGACTTCTATGGAGCTTTGAGGTCACGCACATATGATAGGTCTATCCTCAAGTGGGTAGATGAAGCTGGAGGAA
TGGAGACTCTAGGGAAAGTTCTTCTCAGACGTAAAAAGACCCAAGAGGTTCCTCAATTCACTGCCCCTGAGCAAACGGTG
GAAGCATTGCTGGAATCAGGGTACTCACTCATAAATGAACAGAAACTTATTATGGAAACAAAGCTTTCCAAGGAGTACAT
GAAGAACATGGACGATTGA
Microexon DNA seq GATAAAGTTG
Microexon Amino Acid seq DKVA
Microexon-tag DNA Seq TCCTTTGAACATCTTCAAGGAGATTATTACATTGCTCCATCGTTTCTGGATAAAGTTGCGGTCCACATTGTGAAGAACTACCTTGCTCCTTCTCTAAATATAAAAATC
Microexon-tag Amino Acid seq SFEHLQGDYYIAPSFLDKVAVHIVKNYLAPSLNIKI
Transcript ID AT1G73110.1
Gene ID At.6528
Gene Name NA
Pfam domain motif Torsin
Motif E-value 0.027
Motif start 143
Motif end 188
Protein seq >AT1G73110.1
MALANISLRFKFPPLQSSSSSSSSFNATLINTRKLSSIVCSKPSSNDGGKVANDDGGAKPRKKLSEQSSWEVKDSEGKDY
LYRLGAESDNVNIAVGARSGMIDDVFIGDFLGKDSDIVFDYRQKATRSFEHLQGDYYIAPSFLDKVAVHIVKNYLAPSLN
IKIPLILGIWGGKGQGKTFQTELIFKTMGVEPVIMSAGELESDRAGEPGRLIRDRYRTASQVIQNQGKMSVLMINDIDAG
LGRFGETQMTVNNQIVVGTLMNLADNPTRVSVGQEWREADMVNRVPLIVTGNDFSTLYAPLIREGRMEKFYWQPTREDIV
NIVSRMYEKDGISRKDVISIVDKFPNQALDFYGALRSRTYDRSILKWVDEAGGMETLGKVLLRRKKTQEVPQFTAPEQTV
EALLESGYSLINEQKLIMETKLSKEYMKNMDD*
CDS seq >AT1G73110.1
ATGGCGCTTGCAAACATATCTCTGCGTTTCAAGTTTCCACCTTTACAATCTTCTTCTTCTTCTTCTTCCTCGTTCAATGC
TACTTTAATCAATACCAGAAAACTCTCTTCAATCGTTTGCTCGAAACCCTCCTCTAATGACGGCGGCAAAGTGGCTAATG
ACGATGGTGGCGCAAAGCCGCGGAAGAAGTTGTCGGAGCAATCGTCATGGGAAGTTAAAGATTCAGAAGGGAAGGATTAT
CTCTATAGGCTTGGCGCGGAATCGGATAATGTTAACATAGCCGTTGGGGCACGAAGCGGCATGATCGATGATGTATTCAT
TGGAGACTTCCTTGGAAAAGATTCTGATATTGTGTTTGATTACCGTCAGAAGGCGACGAGGTCCTTTGAACATCTTCAAG
GAGATTATTACATTGCTCCATCGTTTCTGGATAAAGTTGCGGTCCACATTGTGAAGAACTACCTTGCTCCTTCTCTAAAT
ATAAAAATCCCATTGATTTTAGGTATATGGGGAGGTAAAGGACAAGGCAAAACATTTCAGACTGAACTTATATTCAAAAC
AATGGGAGTTGAACCAGTTATAATGTCTGCAGGAGAGTTGGAATCTGATAGAGCTGGTGAACCGGGGAGACTCATACGTG
ACCGCTATCGAACAGCTTCACAAGTCATTCAGAATCAAGGAAAGATGAGTGTTCTCATGATCAATGATATTGATGCTGGC
CTTGGTAGATTTGGGGAAACGCAAATGACAGTAAACAACCAGATAGTTGTTGGTACCCTGATGAATCTTGCGGATAATCC
TACAAGGGTAAGTGTAGGACAAGAATGGAGAGAAGCTGACATGGTAAACAGAGTTCCTCTAATTGTCACAGGGAACGATT
TCTCTACACTGTATGCTCCACTGATCCGTGAAGGAAGAATGGAGAAGTTCTACTGGCAGCCAACTCGTGAAGATATCGTA
AACATTGTTAGCAGAATGTACGAGAAAGATGGTATATCGCGGAAAGATGTTATAAGCATTGTAGATAAGTTTCCAAATCA
AGCACTTGACTTCTATGGAGCTTTGAGGTCACGCACATATGATAGGTCTATCCTCAAGTGGGTAGATGAAGCTGGAGGAA
TGGAGACTCTAGGGAAAGTTCTTCTCAGACGTAAAAAGACCCAAGAGGTTCCTCAATTCACTGCCCCTGAGCAAACGGTG
GAAGCATTGCTGGAATCAGGGTACTCACTCATAAATGAACAGAAACTTATTATGGAAACAAAGCTTTCCAAGGAGTACAT
GAAGAACATGGACGATTGA