| Microexon ID | Zm_5:173404705-173404713:+ |
| Species | Zea mays | Coordinates | 5:173404705..173404713 |
| Microexon Cluster ID | MEP22 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | Glyco_hydro_32N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ACCCCAACG |
| Microexon Amino Acid seq | DPNA |
| Microexon-tag DNA Seq | CTGCTCAGGACGGGGTACCATTTCCAGCCGCCAATGAACTGGATCAACGACCCCAACGCTCCGCTGTACTACAAAGGATGGTATCACCTGTTCTACCAGTACAACCCC |
| Microexon-tag Amino Acid Seq | MLRTGYHFQPPMNWINDPNAPLYYKGWYHLFYQYNP |
| Microexon-tag spanning region | 173404022-173405330 |
| Microexon-tag prediction score | 0.9614 |
| Overlapped with the annotated transcript (%) | 91.67 |
| New Transcript ID | Zm00001d016708_T002x |
| Reference Transcript ID | Zm00001d016708_T002 |
| Gene ID | Zm00001d016708 |
| Gene Name | cell wall invertase1 |
Zm_5:173404705-173404713:+ does not have available information here.
| Microexon DNA seq | ACCCCAACG |
| Microexon Amino Acid seq | DPNA |
| Microexon-tag DNA Seq | CTGCTCAGGACGGGGTACCATTTCCAGCCGCCAATGAACTGGATCAACGACCCCAACGCTCCGCTGTACTACAAAGGATGGTATCACCTGTTCTACCAGTACAACCCC |
| Microexon-tag Amino Acid seq | MLRTGYHFQPPMNWINDPNAPLYYKGWYHLFYQYNP |
| Transcript ID | Zm.24477.3 |
| Gene ID | Zm.24477 |
| Gene Name | cell wall invertase1 |
| Pfam domain motif | Glyco_hydro_32N |
| Motif E-value | 1.4e-103 |
| Motif start | 58 |
| Motif end | 377 |
| Protein seq | >Zm.24477.3 MGTRPRGVVLAPWAVVLVLVLALRLAGASHVIHRSLEAEAAPSVPASIVSPLLRTGYHFQPPMNWINDPNAPLYYKGWYH LFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPAIYPSIPSDKYGCWSGSATILEDGTPAILYTGIDRADINYQVQVLAL PKDASDPLLREWEKPEEYNPVATPAAGGINATQFRDPTTAWRHAGHWRMLVGSVRGARGMALVYRSRDFRKWTKAKHPLH SAALTGMWECPDFFPVSGPGLQAGLDTSAPGRKYVLKSSLDLTRYDYYTIGSYDGGKDRYYPDDPAGDYHHRLRYDYGNY YASKTFYDPVERRRVLLGWANESDSVTDDKAKGWAGIHAIPRKIWLDPTGKQLLQWPIHEVEKLRGKAVSVDAKLVKPGD HFEVTGIATYQADVEVSFELELEAGTSLLEKAEAFDPAYDDDAQKLCGVKGADARGGVGPFGLWVLASADLQERTAVFFR VFRDGHGKPKVLMCTDPTKSSLSPDLYKPTFAGFVDADISSGKITLRSLIDRSVVESFGAGGKTCILSRVYPSIAVGKDA HLYVFNNGEVDVTVSGLTAWEMKKPLMNGA* |
| CDS seq | >Zm.24477.3 ATGGGGACTCGGCCGCGGGGGGTCGTCCTCGCGCCATGGGCGGTGGTGCTGGTGCTGGTGCTCGCGCTTCGTCTGGCAGG CGCGTCGCATGTGATCCACCGCAGCCTGGAGGCCGAGGCGGCGCCGTCGGTCCCGGCCTCCATTGTCAGCCCCCTGCTCA GGACGGGGTACCATTTCCAGCCGCCAATGAACTGGATCAACGACCCCAACGCTCCGCTGTACTACAAAGGATGGTATCAC CTGTTCTACCAGTACAACCCCAAGGGCGCGGTATGGGGCAACATCGTGTGGGCGCACTCGGTGTCGCGCGACCTGATCAA CTGGGTGGCGCTGGAGCCCGCCATCTACCCCAGCATCCCGTCCGACAAGTACGGCTGCTGGTCGGGCTCGGCGACGATCC TGGAGGACGGCACGCCGGCGATCCTGTACACGGGGATCGACCGGGCGGACATCAACTACCAGGTGCAGGTGCTGGCGCTC CCCAAGGACGCGTCCGACCCGCTGCTCCGCGAGTGGGAGAAGCCGGAGGAGTACAACCCGGTGGCGACGCCGGCGGCCGG CGGCATCAACGCGACGCAGTTCCGCGACCCGACGACGGCGTGGCGGCACGCGGGGCACTGGCGGATGCTGGTGGGCAGCG TGCGCGGCGCGCGCGGGATGGCGCTGGTGTACCGGAGCCGGGACTTCAGGAAGTGGACCAAGGCCAAGCACCCGCTGCAC TCGGCGGCGCTGACGGGGATGTGGGAGTGCCCCGACTTCTTCCCGGTGTCCGGGCCGGGGCTGCAGGCCGGCCTCGACAC CTCCGCGCCCGGAAGGAAGTACGTGCTCAAGAGCAGCCTGGACCTCACCCGCTACGACTACTACACCATCGGGTCGTACG ACGGCGGCAAGGACCGGTACTACCCCGACGACCCCGCCGGCGACTACCACCACCGCCTGCGCTACGACTACGGCAACTAC TACGCGTCCAAGACGTTCTACGACCCCGTGGAGCGCCGCCGCGTGCTGCTCGGGTGGGCCAACGAGTCCGACAGCGTCAC CGACGACAAGGCCAAGGGCTGGGCCGGCATCCATGCGATCCCAAGGAAGATCTGGCTGGACCCCACCGGGAAGCAGCTGC TGCAGTGGCCCATCCACGAGGTCGAGAAGCTCAGGGGGAAGGCCGTCAGTGTGGACGCCAAGCTGGTCAAGCCCGGCGAC CATTTTGAGGTCACAGGCATCGCAACTTATCAGGCTGACGTGGAGGTGAGCTTCGAGCTGGAGCTGGAGGCGGGGACGAG CCTGCTGGAGAAGGCGGAGGCGTTCGACCCGGCGTACGACGACGACGCGCAGAAGCTGTGCGGAGTCAAGGGCGCGGACG CCAGGGGCGGCGTGGGGCCATTCGGCCTCTGGGTGCTGGCCTCCGCCGACCTGCAGGAGCGGACGGCCGTCTTCTTCAGG GTGTTCAGGGACGGACACGGCAAGCCCAAGGTGCTCATGTGCACCGACCCCACCAAGTCGTCTCTTAGTCCGGATCTGTA CAAGCCGACCTTCGCGGGCTTCGTCGACGCCGACATCTCCAGCGGCAAGATCACCCTTAGAAGCTTGATCGATCGGTCCG TGGTCGAGAGCTTCGGCGCGGGAGGCAAGACGTGCATCCTGTCACGGGTGTACCCGTCCATCGCCGTCGGGAAGGACGCT CACCTCTACGTTTTCAACAACGGCGAGGTGGACGTCACGGTGTCCGGCCTGACCGCCTGGGAGATGAAGAAACCGCTGAT GAACGGCGCCTGA |