Microexon ID Zm_3:146850045-146850053:-
Species Zea mays
Coordinates 3:146850045..146850053
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCAAATG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq AAGTACAGGACCGCGTACCACTTCCAGCCTCCCAAGAACTGGATCAACGATCCAAATGGACCAATGTACTACAATGGTATCTACCACCAGTTCTACCAGTACAACCCA
Microexon-tag Amino Acid Seq KYRTAYHFQPPKNWINDPNGPMYYNGIYHQFYQYNP
Microexon-tag spanning region146849909-146850796
Microexon-tag prediction score0.9714
Overlapped with the annotated transcript (%) 91.67
New Transcript ID Zm00001d041991_T001x
Reference Transcript ID Zm00001d041991_T001
Gene ID Zm00001d041991
Gene Name NA
Zm_3:146850045-146850053:- does not have available information here.
Microexon DNA seq ATCCAAATG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq AAGTACAGGACCGCGTACCACTTCCAGCCTCCCAAGAACTGGATCAACGATCCAAATGGACCAATGTACTACAATGGTATCTACCACCAGTTCTACCAGTACAACCCA
Microexon-tag Amino Acid seq KYRTAYHFQPPKNWINDPNGPMYYNGIYHQFYQYNP
Transcript ID Zm.15194.1
Gene ID Zm.15194
Gene Name NA
Pfam domain motif Glyco_hydro_32N
Motif E-value 1.9e-99
Motif start 118
Motif end 435
Protein seq >Zm.15194.1
MQSEQPQATAGQQPIGSHCLPLNILRPSSQHFVELTKSPHPILHPHLCLCSSMAMAMARPCAFLLFFLVLFSYDGSGPGS
SRRTRRSGVAQATQRVFLYPQAPKVSSIVSSKYRTAYHFQPPKNWINDPNGPMYYNGIYHQFYQYNPNGSLWGNIVWAHS
VSTDLVNWIRLAPAIERTTPSDINGCWTGSATILKSGRPAIIYTGADTEKRQVQNVAFPKNLSDPYLREWVKPHDNPVIQ
PVGRGLNPGQFRDPTTGWIGPDGLWRIAVGAEVDGHSAALLYESEDFVRWDRVDHPLYSSNASAMWECPDFFAAMPGENS
GLDMSAAVPDGAKHVLKMSLDGSDKYMVGVYDLKGDAFVPDTVIEDRRLWSRIDYGNYYASKSFFDSKKGRRVIWGWTNE
TDSSSDDVAKGWAGIHAIPRTIWLDKDSKQLLQWPVEEIESLRGKQVRHQGLELRKGDLFEIKEIDTLQADVEIDFELTS
IGSADPFDPSWLLDIEKQCREAGASAHGPFGLVVLASESMEEHTSVHFRVYYRSQEKHMVLMCADLRKSSLRPELYTPAY
GGFFELDLEKEKTVVSLRTLIDRSAVESFGGGGRVCIMARVYPAALVDDGGTRMYAFNNGTSTVRVPRLEAWSMRRAQVN
KG*
CDS seq >Zm.15194.1
ATGCAAAGTGAGCAGCCACAGGCCACAGCAGGTCAGCAGCCAATTGGAAGTCACTGTCTTCCTCTGAATATTCTGAGACC
CTCCTCTCAACACTTTGTCGAGTTAACAAAGTCACCTCATCCAATCTTGCATCCCCATCTCTGTCTTTGCTCCTCCATGG
CCATGGCCATGGCCCGACCTTGTGCTTTCCTTCTCTTCTTCCTAGTTCTTTTCTCCTACGACGGATCCGGTCCTGGGAGC
AGCAGGAGGACTAGGAGGAGTGGCGTCGCGCAGGCCACGCAGAGAGTCTTCCTGTATCCACAGGCTCCCAAGGTCTCCTC
CATCGTGAGCAGCAAGTACAGGACCGCGTACCACTTCCAGCCTCCCAAGAACTGGATCAACGATCCAAATGGACCAATGT
ACTACAATGGTATCTACCACCAGTTCTACCAGTACAACCCAAACGGCTCGCTCTGGGGCAACATAGTCTGGGCGCACTCG
GTCTCCACAGATCTCGTGAACTGGATCCGGCTCGCGCCGGCGATAGAGCGGACGACTCCGAGCGACATCAATGGCTGCTG
GACAGGTTCAGCCACCATCCTAAAGAGCGGCCGGCCTGCCATCATATACACCGGCGCCGACACCGAGAAGCGTCAGGTCC
AGAACGTGGCGTTCCCCAAGAACCTGTCCGATCCGTACCTGCGGGAGTGGGTGAAGCCACACGACAACCCGGTGATCCAG
CCGGTCGGACGAGGGCTGAACCCAGGCCAGTTCAGAGACCCGACGACCGGCTGGATCGGCCCGGACGGGCTGTGGAGGAT
AGCCGTCGGGGCCGAGGTCGACGGCCACAGCGCGGCGCTTCTGTACGAGAGCGAGGACTTCGTGCGCTGGGACAGAGTGG
ACCACCCGCTCTACTCCTCCAACGCCTCCGCCATGTGGGAGTGCCCGGACTTCTTCGCGGCGATGCCGGGCGAGAACTCC
GGGCTGGACATGTCGGCTGCGGTCCCGGATGGCGCCAAGCACGTCCTCAAGATGAGCCTTGACGGCTCTGACAAGTACAT
GGTCGGCGTCTATGATCTGAAAGGTGACGCCTTTGTGCCGGATACCGTGATCGAGGACCGGAGGCTGTGGTCAAGGATTG
ACTACGGCAACTACTACGCTTCCAAGTCGTTCTTCGACTCGAAGAAAGGGAGGAGGGTCATATGGGGCTGGACGAATGAG
ACGGACAGTTCGTCAGACGACGTCGCCAAAGGATGGGCTGGAATCCATGCAATTCCCAGGACTATATGGTTGGATAAAGA
CAGCAAGCAGCTGCTGCAATGGCCGGTCGAAGAGATCGAGTCGCTCCGAGGAAAACAAGTCAGACACCAAGGCCTGGAGC
TCAGGAAGGGGGATCTGTTTGAGATTAAGGAAATTGACACTCTGCAGGCAGATGTGGAGATAGATTTCGAGCTCACATCC
ATAGGCAGTGCCGACCCTTTTGACCCTTCCTGGCTCTTGGACATCGAGAAGCAGTGCCGGGAAGCGGGCGCGTCGGCTCA
TGGCCCGTTCGGGCTCGTGGTTCTTGCTTCTGAGAGCATGGAAGAGCACACCTCCGTGCACTTCAGAGTGTACTACAGAT
CACAGGAGAAGCACATGGTTCTTATGTGCGCCGATCTGAGGAAATCGTCCTTGAGACCGGAGCTGTACACGCCAGCCTAC
GGAGGCTTCTTTGAGCTGGACCTGGAGAAGGAAAAGACGGTGGTATCTCTGAGAACTTTGATCGATCGCTCTGCGGTGGA
GAGCTTCGGTGGAGGCGGCAGGGTGTGCATCATGGCCAGGGTCTATCCGGCGGCGCTCGTCGACGACGGCGGCACTCGCA
TGTACGCGTTCAACAATGGCACTAGCACCGTCAGAGTGCCCCGGCTAGAAGCGTGGAGCATGAGGAGGGCACAGGTTAAC
AAGGGATGA