Microexon ID Zm_2:24149514-24149522:-
Species Zea mays
Coordinates 2:24149514..24149522
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCGAACG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq TGGCAGCGCACGGCGTTCCACTTCCAGCCCCCCAAGAACTGGATGAACGATCCGAACGGTCCGCTGTATCACAAGGGCTGGTACCACCTCTTCTACCAGTGGAACCCG
Microexon-tag Amino Acid Seq WQRTAFHFQPPKNWMNDPNGPLYHKGWYHLFYQWNP
Microexon-tag spanning region24149266-24149744
Microexon-tag prediction score0.9696
Overlapped with the annotated transcript (%) 91.67
New Transcript ID Zm00001d002830_T001x
Reference Transcript ID Zm00001d002830_T001
Gene ID Zm00001d002830
Gene Name invertase1
Zm_2:24149514-24149522:- does not have available information here.
Microexon DNA seq ATCCGAACG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq TGGCAGCGCACGGCGTTCCACTTCCAGCCCCCCAAGAACTGGATGAACGATCCGAACGGTCCGCTGTATCACAAGGGCTGGTACCACCTCTTCTACCAGTGGAACCCG
Microexon-tag Amino Acid seq WQRTAFHFQPPKNWMNDPNGPLYHKGWYHLFYQWNP
Transcript ID Zm.9390.2
Gene ID Zm.9390
Gene Name invertase1
Pfam domain motif Glyco_hydro_32N
Motif E-value 1.7e-105
Motif start 129
Motif end 459
Protein seq >Zm.9390.2
MIPAVADPTTLDGGGARRPLLPETDPRGRAAAGAGQKRPPATPTVLPAVVSAVLLLVVVAVTVLASQHVDGQGGGVPAGE
DAVVVEVAASRGVAEGVSEKSTAQLLGAGALQDFSWTNAMLAWQRTAFHFQPPKNWMNDPNGPLYHKGWYHLFYQWNPDS
AVWGNITWGHAVSRDLLHWLHLPLAMVPDHPYDANGVWSGSATRLPDGRIVMLYTGSTAESSAQVQNLAEPADASDPLLR
EWVKSDANPVLVPPPGIGPTDFRDPTTAWRTPGNDTPAWRVAIGSKDRDHAGLALVYRTEDFVRYDPAPALMHAVPGTGM
WECVDFYPVAAGSGAAADSGDGLETSAAPGPGVKHVLKASLDDDKHDYYAIGTYDPATDTWTPDSAEDDVGIGLRYDYGK
YYASKTFYDPVLRRRVLWGWVGETDSERADILKGWASVQSIPRTVLLDTKTGSNLLQWPVVEVENLRMSGKSFDGVALDR
GSVVPLDVGKATQLDIEAVFEVDASDAAAVTEADVTFNCSTSAGAAGRGLLGPFGLLVLADDDLSEQTAVYFYLLKGTDG
SLQTFFCQDELRASKANDLVKRVYGSLVPVLDGENLSVRILVDHSIVESFAQGGRTCITSRVYPTRAIYDSARVFLFNNA
THAHVKAKSVKIWQLNSAYIRPYPATTTSL*
CDS seq >Zm.9390.2
ATGATCCCTGCCGTTGCTGATCCGACGACGCTGGACGGCGGGGGCGCGCGCAGGCCGTTGCTCCCGGAGACGGACCCTCG
GGGGCGGGCTGCCGCCGGCGCCGGGCAGAAGCGGCCGCCGGCGACGCCGACCGTTCTCCCCGCCGTCGTCTCCGCCGTGC
TCCTGCTCGTCGTCGTGGCGGTCACAGTCCTCGCGTCGCAGCACGTCGACGGGCAGGGTGGGGGCGTTCCCGCGGGCGAA
GATGCCGTCGTCGTCGAGGTGGCCGCCTCCCGTGGCGTGGCTGAGGGCGTGTCGGAGAAGTCAACGGCCCAGCTCCTCGG
CGCCGGCGCGCTCCAGGACTTCTCCTGGACCAACGCGATGCTGGCGTGGCAGCGCACGGCGTTCCACTTCCAGCCCCCCA
AGAACTGGATGAACGATCCGAACGGTCCGCTGTATCACAAGGGCTGGTACCACCTCTTCTACCAGTGGAACCCGGACTCC
GCGGTATGGGGCAACATCACCTGGGGCCACGCCGTCTCGCGCGACCTCCTCCACTGGCTGCACCTACCGCTGGCCATGGT
GCCCGATCACCCGTACGACGCCAACGGCGTCTGGTCCGGGTCGGCGACGCGCCTGCCCGACGGCCGGATCGTCATGCTCT
ACACGGGCTCCACGGCGGAGTCGTCGGCGCAGGTGCAGAACCTCGCGGAGCCGGCCGACGCGTCCGACCCGCTGCTGCGG
GAGTGGGTCAAGTCGGACGCCAACCCGGTGCTGGTGCCGCCGCCGGGCATCGGGCCGACGGACTTCCGCGACCCGACGAC
GGCGTGGCGGACGCCCGGCAACGACACGCCGGCGTGGCGGGTCGCCATCGGGTCCAAGGACCGGGACCACGCGGGCTTGG
CGCTGGTGTACCGGACGGAGGACTTCGTGCGGTACGACCCGGCGCCGGCGCTGATGCACGCCGTGCCGGGCACGGGCATG
TGGGAGTGCGTGGACTTCTACCCGGTGGCCGCGGGATCAGGCGCCGCGGCGGACAGCGGGGACGGGCTGGAGACGTCCGC
GGCGCCGGGGCCCGGGGTGAAGCACGTGCTCAAGGCCAGCCTCGACGACGACAAGCACGACTACTACGCGATCGGCACCT
ACGACCCGGCGACGGACACCTGGACCCCCGACAGCGCGGAGGACGACGTCGGCATCGGCCTCCGGTACGACTACGGAAAG
TACTACGCGTCCAAGACCTTCTACGACCCCGTCCTTCGCCGGCGGGTGCTCTGGGGGTGGGTCGGCGAGACCGACAGCGA
GCGCGCGGACATCCTCAAGGGCTGGGCATCCGTGCAGTCAATCCCCAGGACGGTCCTCCTGGACACGAAGACGGGCAGCA
ACCTGCTCCAGTGGCCGGTGGTGGAGGTGGAGAACCTCCGGATGAGCGGCAAGAGCTTCGACGGCGTCGCGCTGGACCGC
GGATCCGTCGTGCCCCTCGACGTCGGCAAGGCGACGCAGTTGGACATCGAGGCTGTGTTCGAGGTGGACGCGTCGGACGC
GGCGGCCGTGACGGAGGCCGACGTGACGTTCAACTGCAGCACCAGCGCTGGCGCGGCGGGCCGGGGCCTGCTCGGCCCGT
TCGGCCTTCTCGTGCTGGCGGACGACGACTTGTCCGAGCAGACCGCCGTGTACTTCTACCTGCTCAAGGGCACGGACGGC
AGCCTCCAAACTTTCTTCTGCCAAGACGAGCTCAGGGCATCCAAGGCGAACGATCTGGTTAAGAGAGTATACGGGAGCTT
GGTCCCTGTGCTAGATGGGGAGAATCTCTCGGTCAGAATACTGGTTGACCACTCCATCGTGGAGAGCTTTGCTCAAGGCG
GGAGGACGTGCATCACGTCGCGAGTGTACCCCACACGAGCCATCTACGACTCCGCCCGCGTCTTCCTCTTCAACAACGCC
ACACATGCTCACGTCAAAGCAAAATCCGTCAAGATCTGGCAGCTCAACTCCGCCTACATCCGGCCATATCCGGCAACGAC
GACTTCTCTATGA