
Microexon ID | Vv_Un:42260817-42260825:+ |
Species | Vistis vinifera | Coordinates | Un:42260817..42260825 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAAAGAACGGGTTATCATTTTCAACCAGAAAAGAATTGGATGAACGATCCCAACGGTCCAATGTTCTATGGTGGATGGTATCACTTCTTCTATCAGTACAACCCA |
Microexon-tag Amino Acid Seq | WQRTGYHFQPEKNWMNDPNGPMFYGGWYHFFYQYNP |
Microexon-tag spanning region | 42259902-42261456 |
Microexon-tag prediction score | 0.956 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_00s2527g00010.t01x |
Reference Transcript ID | VIT_00s2527g00010.t01 |
Gene ID | VIT_00s2527g00010 |
Gene Name | NA |
Transcript ID | VIT_00s2527g00010.t01 |
Protein ID | VIT_00s2527g00010.t01 |
Gene ID | VIT_00s2527g00010 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 3.6e-74 |
Motif start | 10 |
Motif end | 204 |
Protein seq | >VIT_00s2527g00010.t01 MLTWQRTGYHFQPEKNWMNDPNGPMFYGGWYHFFYQYNPDAAVWGNIVWGHAVSKDLIEWLHLPLAMVADQWYDTNGVWT GSATLLSDGQVIMLYTGATNESVQVQNLAYPADLSDPLLVDWVKYPGNPVLVPPPGIDDKDFRDPTTAWYWPDGKWRIAI GSKVNKTGISLVYNTEDFKKYELIEGVLHAVPGTGMWECVDLYP |
CDS seq | >VIT_00s2527g00010.t01 ATGCTAACTTGGCAAAGAACGGGTTATCATTTTCAACCAGAAAAGAATTGGATGAACGATCCCAACGGTCCAATGTTCTA TGGTGGATGGTATCACTTCTTCTATCAGTACAACCCAGATGCTGCAGTGTGGGGCAACATAGTGTGGGGCCATGCCGTGT CAAAGGACCTCATAGAGTGGCTTCATCTCCCTTTGGCCATGGTGGCTGATCAGTGGTATGACACCAATGGTGTGTGGACT GGCTCTGCAACCCTTCTCTCTGATGGGCAAGTGATCATGCTCTACACTGGTGCCACCAATGAGTCGGTGCAGGTCCAGAA CCTGGCATACCCTGCTGACTTGTCTGATCCACTCCTTGTGGACTGGGTCAAGTACCCAGGTAACCCAGTGCTTGTTCCCC CACCAGGCATCGATGACAAGGACTTTCGTGACCCTACAACAGCCTGGTATTGGCCCGATGGAAAATGGAGGATTGCTATC GGCTCTAAAGTTAACAAAACTGGCATTTCTTTAGTTTATAATACTGAGGACTTCAAGAAGTATGAGCTCATAGAAGGGGT TCTTCATGCTGTCCCTGGCACCGGCATGTGGGAGTGTGTGGACCTCTACCCT |
Microexon DNA seq | NA |
Microexon Amino Acid seq | NA |
Microexon-tag DNA Seq | NA |
Microexon-tag Amino Acid seq | NA |
Transcript ID | VIT_00s2527g00010.t01 |
Gene ID | Vv.36759 |
Gene Name | NA |
Pfam domain motif | NA |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | |
CDS seq |