
Microexon ID | Vv_9:2133520-2133528:+ |
Species | Vistis vinifera | Coordinates | 9:2133520..2133528 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Vv_9:2133520-2133528:+ does not have available information here.
Vv_9:2133520-2133528:+ does not have available information here.
Microexon DNA seq | ATCCTAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CCTTACAGAACTGGATATCATTTCCAGCCTCGCAAGAACTGGATGAATGATCCTAATGGGCCTATGATCTACAAGGGGCTCTACCATTTCTTCTATCAATACAATCCC |
Microexon-tag Amino Acid seq | PYRTGYHFQPRKNWMNDPNGPMIYKGLYHFFYQYNP |
Transcript ID | Vv.31938.1 |
Gene ID | Vv.31938 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 8.2e-110 |
Motif start | 53 |
Motif end | 372 |
Protein seq | >Vv.31938.1 MATSSHCLLWFFFSLFFGHGFVPLEASHQVYIHLQNQSPSSLKTHQPYRTGYHFQPRKNWMNDPNGPMIYKGLYHFFYQY NPHGAVWGNIVWAHSTSTDLVNWTPHKYAISPSQPADINGCWSGSATILPNGKPVILYTGIDPQNKQVQNMAVPKNLSDP FLLEWTKLPQNPLMEPTTINSINASSFRDPTTAWQGTDGRWRVIIGSKIKRKGLAILYRSKDFVRWTKAQHPLHSGKNTG MWECPDFFPVSINSSTGVDTSSISKTLKYVLKLSLDDTKHDYYTIGSYNREKDTYVPDKGSVDNDSGLRYDYGKFYASKT FFDNAKNRRILWGWINESSSVEHDIEKGWSGVQAIPRNVWLDKSGKQLLQWPIAEIEKQRIKPGHMSSRELKGGSKVEVG GITASQADVEISFKISDFKKAEVFDESWSNPQLLCSQRGASVKGGLGPFGLMVLASKGMEEYTAVFFRIFKRQTKYVVLM CSDQSRSSLDNDNDKTTYGAFLDVDPVHEKLSLRSLIDHSIVESFGGGGKVCITARVYPTLAIDGEAHLYAFNKGTGSVG MTTLRAWSMKKAKIN* |
CDS seq | >Vv.31938.1 ATGGCCACCTCTTCTCATTGCCTATTATGGTTCTTCTTCTCTCTGTTCTTTGGCCATGGCTTTGTGCCCCTTGAAGCCTC CCACCAAGTCTACATCCACCTCCAAAATCAGTCTCCCTCTTCTTTAAAAACCCACCAGCCTTACAGAACTGGATATCATT TCCAGCCTCGCAAGAACTGGATGAATGATCCTAATGGGCCTATGATCTACAAGGGGCTCTACCATTTCTTCTATCAATAC AATCCCCATGGTGCAGTTTGGGGAAACATAGTGTGGGCACATTCCACATCAACCGATCTTGTCAACTGGACTCCTCATAA ATATGCCATTTCCCCATCCCAGCCAGCTGATATCAATGGCTGCTGGTCAGGTTCAGCAACCATCCTGCCAAACGGCAAGC CAGTGATTCTCTATACTGGTATCGATCCACAGAACAAGCAAGTTCAGAACATGGCTGTGCCCAAAAATCTCTCTGACCCC TTCCTTCTAGAATGGACTAAGCTCCCTCAGAACCCTCTAATGGAACCTACTACCATCAACAGCATCAATGCTAGCTCATT CAGAGACCCTACGACTGCTTGGCAGGGCACTGATGGAAGATGGAGGGTGATAATTGGAAGCAAAATAAAGCGAAAAGGAT TAGCAATTTTGTATAGGAGCAAAGATTTTGTCCGCTGGACTAAAGCACAACACCCGTTACATTCAGGGAAGAATACTGGA ATGTGGGAGTGTCCAGACTTTTTTCCAGTATCTATCAACAGCTCTACGGGTGTAGATACATCATCGATAAGTAAAACCCT TAAATATGTTCTTAAATTGAGCTTGGATGATACTAAGCATGACTACTACACGATTGGAAGCTACAACCGTGAGAAGGATA CCTATGTCCCAGATAAGGGGTCTGTGGATAATGACTCAGGCTTAAGATATGATTATGGCAAGTTTTATGCTTCAAAAACC TTCTTTGACAACGCTAAGAACCGAAGAATCTTGTGGGGTTGGATCAACGAATCATCTAGTGTGGAGCACGATATCGAGAA GGGATGGTCTGGAGTTCAGGCAATTCCAAGGAATGTTTGGCTGGACAAGTCTGGGAAACAGTTACTGCAATGGCCGATTG CAGAGATTGAAAAACAACGGATTAAACCGGGGCATATGTCTAGCAGAGAGCTGAAGGGAGGATCAAAGGTTGAAGTTGGT GGAATAACAGCATCACAGGCAGATGTGGAGATATCGTTTAAGATATCAGACTTTAAGAAAGCAGAGGTTTTTGACGAAAG CTGGAGTAATCCACAGCTGCTGTGCAGTCAAAGGGGTGCATCAGTAAAAGGTGGGCTAGGGCCATTTGGACTAATGGTGC TGGCTTCAAAGGGCATGGAAGAATACACAGCAGTTTTCTTTAGAATTTTCAAACGTCAGACCAAATATGTGGTGCTCATG TGCAGTGACCAAAGCAGGTCGTCTTTAGATAATGATAATGATAAGACCACGTATGGGGCATTTTTGGACGTGGATCCTGT CCATGAGAAGCTGTCACTAAGGAGTTTGATTGATCACTCAATAGTGGAGAGCTTTGGAGGAGGTGGAAAGGTTTGCATAA CAGCTAGGGTTTATCCTACATTGGCTATTGACGGTGAAGCCCACTTGTATGCCTTCAACAAAGGAACTGGGAGTGTAGGG ATGACAACACTGAGAGCTTGGAGCATGAAGAAAGCTAAAATCAATTGA |