Microexon ID Vv_8:17101333-17101341:-
Species Vistis vinifera
Coordinates 8:17101333..17101341
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCAAATG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq GTTCATAGAACTGGATACCACTTTCAACCCCCTAGGAACTGGATAAACGATCCAAATGGACCCATGTACTACAATGGAATCTACCACCTTTTCTACCAGTACAATCCC
Microexon-tag Amino Acid Seq VHRTGYHFQPPRNWINDPNGPMYYNGIYHLFYQYNP
Microexon-tag spanning region17101210-17102431
Microexon-tag prediction score0.9548
Overlapped with the annotated transcript (%) 91.67
New Transcript ID VIT_08s0007g03060.t01x
Reference Transcript ID VIT_08s0007g03060.t01
Gene ID VIT_08s0007g03060
Gene Name NA
Vv_8:17101333-17101341:- does not have available information here.
Microexon DNA seq ATCCAAATG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq GTTCATAGAACTGGATACCACTTTCAACCCCCTAGGAACTGGATAAACGATCCAAATGGACCCATGTACTACAATGGAATCTACCACCTTTTCTACCAGTACAATCCC
Microexon-tag Amino Acid seq VHRTGYHFQPPRNWINDPNGPMYYNGIYHLFYQYNP
Transcript ID Vv.31082.1
Gene ID Vv.31082
Gene Name NA
Pfam domain motif Glyco_hydro_32N
Motif E-value 2.5e-108
Motif start 53
Motif end 369
Protein seq >Vv.31082.1
MKGGSRLLWFLFSLCCYCVIINNNGVEGSHKIHHEYQCVPDTKVRQVHRTGYHFQPPRNWINDPNGPMYYNGIYHLFYQY
NPKGAVWGNIVWAHSVSRNLIDWEALEPAIYPSKPFDINGCWSGSATILPGNKPAILYTGIDTQQRQVQNIAFPANLSDP
YLRKWVKPDSNPLVVPDVGMNASTFRDPTTAWRVNGHWRMLVGARKKHRGIVYLYRSRDFMTWIKSKHPLHSAQNTGMWE
CPDFFPVSLYSERGLDTSVTGKNVRHVLKVSLDRTRYEYYTIGRYYPEIDRYIPGNTSADGWSGLRYDYGNFYASKTFFD
AEQKRRILWGWANESDTADNDTAKGWAGIQTIPRTLWLDKGKKQLLQWPIEELNTLRGQKIQVRNQELKIGENVEITGIT
AAQADVEVTFSLPSLDKAEEFDPSWVNAQDLCGMKGSTVQGGVGPFGLLTLASEHLEEYTPVFFRIFKAKGKHVVLMCSD
AKSSSLRTELYKPSFAGFVDVDLKDGMLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVSKKAHLYAFNNGTEAVTIKK
LNAWTMHRPQMN*
CDS seq >Vv.31082.1
ATGAAGGGCGGTTCAAGGCTTCTCTGGTTTTTGTTCTCTCTTTGTTGTTACTGTGTAATAATAAACAACAATGGCGTTGA
AGGGTCTCATAAGATTCATCATGAGTATCAGTGTGTGCCTGACACTAAGGTTAGGCAAGTTCATAGAACTGGATACCACT
TTCAACCCCCTAGGAACTGGATAAACGATCCAAATGGACCCATGTACTACAATGGAATCTACCACCTTTTCTACCAGTAC
AATCCCAAAGGTGCAGTTTGGGGTAACATCGTGTGGGCTCACTCAGTATCAAGGAATCTGATAGACTGGGAGGCGCTTGA
GCCAGCCATCTATCCTTCAAAGCCGTTTGACATAAACGGATGTTGGTCTGGTTCAGCCACCATCTTGCCTGGTAACAAGC
CTGCAATTCTCTACACTGGAATCGACACACAACAAAGGCAAGTCCAGAACATTGCATTTCCAGCCAACCTCTCGGATCCA
TACCTAAGGAAATGGGTGAAACCCGACAGCAACCCACTAGTGGTTCCTGATGTTGGCATGAATGCAAGCACATTCCGTGA
CCCAACAACTGCTTGGCGGGTGAATGGGCATTGGAGGATGTTGGTGGGTGCCAGAAAGAAGCATAGAGGGATAGTCTATT
TGTATAGGAGTAGAGATTTCATGACATGGATAAAATCAAAACATCCTCTTCATTCTGCCCAGAATACCGGAATGTGGGAA
TGTCCTGATTTTTTTCCTGTTTCTTTGTATAGTGAAAGGGGGTTAGACACATCAGTAACGGGTAAAAATGTTAGACATGT
TTTGAAGGTGAGCCTTGACCGAACTAGATATGAGTACTATACAATTGGAAGATATTATCCGGAAATAGATAGGTATATAC
CGGGCAACACCTCTGCTGATGGTTGGAGTGGGTTGAGGTATGATTATGGCAATTTTTATGCTTCGAAAACGTTCTTTGAT
GCCGAGCAGAAACGGAGGATTTTGTGGGGTTGGGCTAATGAGTCAGATACAGCAGACAATGATACTGCAAAAGGATGGGC
TGGAATTCAGACAATTCCAAGGACCCTATGGCTTGACAAGGGTAAAAAACAATTGTTACAATGGCCCATTGAAGAACTAA
ATACACTAAGAGGGCAAAAGATTCAGGTGAGGAATCAAGAGCTCAAGATTGGGGAAAATGTTGAAATCACAGGAATTACA
GCCGCACAGGCCGATGTTGAAGTTACATTCTCTTTGCCGAGCTTGGACAAGGCTGAAGAATTCGATCCTAGCTGGGTTAA
CGCACAAGATCTCTGCGGCATGAAGGGTTCAACTGTTCAAGGTGGGGTTGGACCCTTTGGACTGTTGACATTGGCTTCAG
AACACCTTGAAGAGTACACTCCTGTCTTCTTCAGAATCTTCAAGGCCAAAGGCAAGCATGTAGTCCTTATGTGCTCTGAT
GCGAAAAGTTCCTCGTTACGGACAGAACTATACAAACCATCATTCGCAGGTTTTGTGGATGTAGATTTAAAAGATGGGAT
GCTCTCCCTTAGAAGTTTGATCGACCATTCTGTAGTGGAAAGTTTCGGGGCTGGAGGAAAAACATGCATCACATCTAGGG
TTTATCCTACTCTAGCAGTCTCGAAGAAGGCTCATCTATATGCATTCAACAATGGAACAGAGGCTGTCACCATTAAGAAG
CTGAATGCATGGACTATGCATCGTCCTCAAATGAACTAA