
Microexon ID | Vv_8:17101333-17101341:- |
Species | Vistis vinifera | Coordinates | 8:17101333..17101341 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | GTTCATAGAACTGGATACCACTTTCAACCCCCTAGGAACTGGATAAACGATCCAAATGGACCCATGTACTACAATGGAATCTACCACCTTTTCTACCAGTACAATCCC |
Microexon-tag Amino Acid Seq | VHRTGYHFQPPRNWINDPNGPMYYNGIYHLFYQYNP |
Microexon-tag spanning region | 17101210-17102431 |
Microexon-tag prediction score | 0.9548 |
Overlapped with the annotated transcript (%) | 91.67 |
New Transcript ID | VIT_08s0007g03060.t01x |
Reference Transcript ID | VIT_08s0007g03060.t01 |
Gene ID | VIT_08s0007g03060 |
Gene Name | NA |
Vv_8:17101333-17101341:- does not have available information here.
Microexon DNA seq | ATCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | GTTCATAGAACTGGATACCACTTTCAACCCCCTAGGAACTGGATAAACGATCCAAATGGACCCATGTACTACAATGGAATCTACCACCTTTTCTACCAGTACAATCCC |
Microexon-tag Amino Acid seq | VHRTGYHFQPPRNWINDPNGPMYYNGIYHLFYQYNP |
Transcript ID | Vv.31082.1 |
Gene ID | Vv.31082 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 2.5e-108 |
Motif start | 53 |
Motif end | 369 |
Protein seq | >Vv.31082.1 MKGGSRLLWFLFSLCCYCVIINNNGVEGSHKIHHEYQCVPDTKVRQVHRTGYHFQPPRNWINDPNGPMYYNGIYHLFYQY NPKGAVWGNIVWAHSVSRNLIDWEALEPAIYPSKPFDINGCWSGSATILPGNKPAILYTGIDTQQRQVQNIAFPANLSDP YLRKWVKPDSNPLVVPDVGMNASTFRDPTTAWRVNGHWRMLVGARKKHRGIVYLYRSRDFMTWIKSKHPLHSAQNTGMWE CPDFFPVSLYSERGLDTSVTGKNVRHVLKVSLDRTRYEYYTIGRYYPEIDRYIPGNTSADGWSGLRYDYGNFYASKTFFD AEQKRRILWGWANESDTADNDTAKGWAGIQTIPRTLWLDKGKKQLLQWPIEELNTLRGQKIQVRNQELKIGENVEITGIT AAQADVEVTFSLPSLDKAEEFDPSWVNAQDLCGMKGSTVQGGVGPFGLLTLASEHLEEYTPVFFRIFKAKGKHVVLMCSD AKSSSLRTELYKPSFAGFVDVDLKDGMLSLRSLIDHSVVESFGAGGKTCITSRVYPTLAVSKKAHLYAFNNGTEAVTIKK LNAWTMHRPQMN* |
CDS seq | >Vv.31082.1 ATGAAGGGCGGTTCAAGGCTTCTCTGGTTTTTGTTCTCTCTTTGTTGTTACTGTGTAATAATAAACAACAATGGCGTTGA AGGGTCTCATAAGATTCATCATGAGTATCAGTGTGTGCCTGACACTAAGGTTAGGCAAGTTCATAGAACTGGATACCACT TTCAACCCCCTAGGAACTGGATAAACGATCCAAATGGACCCATGTACTACAATGGAATCTACCACCTTTTCTACCAGTAC AATCCCAAAGGTGCAGTTTGGGGTAACATCGTGTGGGCTCACTCAGTATCAAGGAATCTGATAGACTGGGAGGCGCTTGA GCCAGCCATCTATCCTTCAAAGCCGTTTGACATAAACGGATGTTGGTCTGGTTCAGCCACCATCTTGCCTGGTAACAAGC CTGCAATTCTCTACACTGGAATCGACACACAACAAAGGCAAGTCCAGAACATTGCATTTCCAGCCAACCTCTCGGATCCA TACCTAAGGAAATGGGTGAAACCCGACAGCAACCCACTAGTGGTTCCTGATGTTGGCATGAATGCAAGCACATTCCGTGA CCCAACAACTGCTTGGCGGGTGAATGGGCATTGGAGGATGTTGGTGGGTGCCAGAAAGAAGCATAGAGGGATAGTCTATT TGTATAGGAGTAGAGATTTCATGACATGGATAAAATCAAAACATCCTCTTCATTCTGCCCAGAATACCGGAATGTGGGAA TGTCCTGATTTTTTTCCTGTTTCTTTGTATAGTGAAAGGGGGTTAGACACATCAGTAACGGGTAAAAATGTTAGACATGT TTTGAAGGTGAGCCTTGACCGAACTAGATATGAGTACTATACAATTGGAAGATATTATCCGGAAATAGATAGGTATATAC CGGGCAACACCTCTGCTGATGGTTGGAGTGGGTTGAGGTATGATTATGGCAATTTTTATGCTTCGAAAACGTTCTTTGAT GCCGAGCAGAAACGGAGGATTTTGTGGGGTTGGGCTAATGAGTCAGATACAGCAGACAATGATACTGCAAAAGGATGGGC TGGAATTCAGACAATTCCAAGGACCCTATGGCTTGACAAGGGTAAAAAACAATTGTTACAATGGCCCATTGAAGAACTAA ATACACTAAGAGGGCAAAAGATTCAGGTGAGGAATCAAGAGCTCAAGATTGGGGAAAATGTTGAAATCACAGGAATTACA GCCGCACAGGCCGATGTTGAAGTTACATTCTCTTTGCCGAGCTTGGACAAGGCTGAAGAATTCGATCCTAGCTGGGTTAA CGCACAAGATCTCTGCGGCATGAAGGGTTCAACTGTTCAAGGTGGGGTTGGACCCTTTGGACTGTTGACATTGGCTTCAG AACACCTTGAAGAGTACACTCCTGTCTTCTTCAGAATCTTCAAGGCCAAAGGCAAGCATGTAGTCCTTATGTGCTCTGAT GCGAAAAGTTCCTCGTTACGGACAGAACTATACAAACCATCATTCGCAGGTTTTGTGGATGTAGATTTAAAAGATGGGAT GCTCTCCCTTAGAAGTTTGATCGACCATTCTGTAGTGGAAAGTTTCGGGGCTGGAGGAAAAACATGCATCACATCTAGGG TTTATCCTACTCTAGCAGTCTCGAAGAAGGCTCATCTATATGCATTCAACAATGGAACAGAGGCTGTCACCATTAAGAAG CTGAATGCATGGACTATGCATCGTCCTCAAATGAACTAA |