
Microexon ID | Vv_4:947936-947944:- |
Species | Vistis vinifera | Coordinates | 4:947936..947944 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Vv_4:947936-947944:- does not have available information here.
Vv_4:947936-947944:- does not have available information here.
Microexon DNA seq | ACCCTAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CCTTACAGGACTGCCTACCACTTCCAGCCTCCGAAAAACTGGATGAATGACCCTAATGGGCCAATGTACTACAATGGTGTTTACCATCTGTTCTATCAGTACAATCCC |
Microexon-tag Amino Acid seq | PYRTAYHFQPPKNWMNDPNGPMYYNGVYHLFYQYNP |
Transcript ID | Vv.22512.6 |
Gene ID | Vv.22512 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 3e-104 |
Motif start | 46 |
Motif end | 359 |
Protein seq | >Vv.22512.6 MEISAIWAVGLCLFLARHGIEAEASYPSCRNLQSNPTEQPYRTAYHFQPPKNWMNDPNGPMYYNGVYHLFYQYNPYAAVW GNITWAHSISYDLVNWVHLDHALNPTDPFDINGCWTGSATILPGEEPVIIYTGADTQNRQVQNMAVPKNISDPLLREWIK SPRNPLMSPTNGIDANNFRDPTTAWQGPDKVWRIIVGSLINDHGTALLYRSRDFVNWTKSQTPLHSSNKTGMWECPDFYP VSTRTGVETSVQNADTQHVLKASFNGNDYYIIGKYVPETDTYLVETDFLDAGSDLRYDYGEFYASKTFFDAAKKRRILWA WIQESDSSSADIEKGWSGLQSIPRSVLLDQTGRQLVQWPIKEIEELRENQVTLLNKEVRGGSVLEVPGITASQVDVEVSF DFPHFKEAEVLDPSWVDPQLLCTQKNASVKGSIGPFGLLVLASKDLTEQTAIFFHIFKTHNKKYVVLMCSDQSRSSVRQD VDKTSYGAFVDIDPLREKISLRGLIDHSIVESFGGEGRSCITARVYPELAINKEAHLYVFNNGTQSVKISRLDAWSMKKA EIVPTNRRRNSHFN* |
CDS seq | >Vv.22512.6 ATGGAGATATCTGCAATTTGGGCTGTTGGGTTGTGCCTTTTTCTGGCTAGACATGGGATTGAGGCAGAGGCCTCTTATCC TAGTTGCAGAAATCTTCAATCTAATCCAACAGAGCAGCCTTACAGGACTGCCTACCACTTCCAGCCTCCGAAAAACTGGA TGAATGACCCTAATGGGCCAATGTACTACAATGGTGTTTACCATCTGTTCTATCAGTACAATCCCTATGCTGCAGTATGG GGAAACATTACATGGGCCCATTCCATATCTTATGATCTTGTCAATTGGGTTCATCTTGATCATGCTCTTAATCCAACTGA TCCTTTTGACATCAATGGTTGTTGGACTGGTTCTGCTACAATACTTCCCGGAGAAGAACCTGTCATTATATACACTGGGG CAGATACTCAAAACCGACAAGTCCAAAACATGGCAGTGCCCAAGAACATATCTGATCCACTCCTTAGAGAATGGATAAAA TCACCCCGTAATCCCCTAATGAGTCCTACTAACGGCATTGATGCAAACAATTTCAGAGACCCTACCACTGCTTGGCAAGG CCCAGACAAAGTATGGAGAATCATTGTTGGAAGCCTGATAAATGATCATGGTACAGCCCTTCTTTATCGAAGTAGAGATT TTGTGAACTGGACAAAGAGCCAAACCCCTCTTCATTCATCCAATAAAACTGGAATGTGGGAGTGTCCAGACTTCTACCCT GTCAGTACCAGAACTGGGGTTGAGACCTCTGTTCAAAATGCAGATACACAGCATGTGCTTAAGGCAAGCTTCAATGGGAA TGACTACTACATAATAGGAAAATATGTGCCTGAAACCGATACCTATCTGGTCGAGACTGACTTCTTGGATGCTGGTTCGG ATTTGAGATATGATTATGGGGAATTTTATGCTTCCAAAACATTTTTTGATGCTGCGAAAAAGCGGCGGATACTGTGGGCC TGGATACAAGAATCTGACAGTTCATCGGCTGATATTGAAAAAGGGTGGTCTGGGCTTCAGTCCATTCCTAGGAGTGTTTT GCTCGATCAAACTGGACGGCAATTAGTACAGTGGCCTATCAAAGAAATCGAGGAACTACGTGAAAACCAAGTGACCCTCT TAAATAAGGAGGTCAGGGGTGGTTCTGTACTTGAAGTTCCTGGTATTACAGCTTCACAGGTTGATGTAGAAGTTTCATTT GATTTCCCACATTTCAAAGAAGCAGAGGTCTTGGATCCCAGTTGGGTTGATCCCCAACTGCTCTGTACTCAAAAGAATGC ATCTGTTAAAGGCAGCATTGGGCCATTTGGTCTGTTGGTTTTGGCCTCTAAGGATCTGACAGAACAAACTGCAATCTTCT TTCACATATTCAAAACTCATAATAAGAAATACGTTGTGCTTATGTGCAGTGATCAGAGCAGGTCATCTGTGAGGCAAGAC GTTGATAAAACAAGCTATGGAGCTTTTGTTGATATAGATCCTCTTCGTGAGAAGATTTCCCTAAGAGGCTTGATAGACCA TTCTATTGTTGAGAGTTTTGGTGGGGAAGGGAGGAGCTGCATAACTGCAAGGGTTTATCCAGAGTTGGCTATTAATAAAG AAGCACACTTGTATGTATTTAACAATGGAACTCAAAGTGTGAAAATCTCAAGACTTGATGCTTGGAGCATGAAGAAAGCT GAGATTGTTCCTACCAATAGAAGAAGAAACTCCCATTTCAACTAA |