Microexon ID Vv_4:947936-947944:-
Species Vistis vinifera
Coordinates 4:947936..947944
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Vv_4:947936-947944:- does not have available information here.
Vv_4:947936-947944:- does not have available information here.
Microexon DNA seq ACCCTAATG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq CCTTACAGGACTGCCTACCACTTCCAGCCTCCGAAAAACTGGATGAATGACCCTAATGGGCCAATGTACTACAATGGTGTTTACCATCTGTTCTATCAGTACAATCCC
Microexon-tag Amino Acid seq PYRTAYHFQPPKNWMNDPNGPMYYNGVYHLFYQYNP
Transcript ID Vv.22512.6
Gene ID Vv.22512
Gene Name NA
Pfam domain motif Glyco_hydro_32N
Motif E-value 3e-104
Motif start 46
Motif end 359
Protein seq >Vv.22512.6
MEISAIWAVGLCLFLARHGIEAEASYPSCRNLQSNPTEQPYRTAYHFQPPKNWMNDPNGPMYYNGVYHLFYQYNPYAAVW
GNITWAHSISYDLVNWVHLDHALNPTDPFDINGCWTGSATILPGEEPVIIYTGADTQNRQVQNMAVPKNISDPLLREWIK
SPRNPLMSPTNGIDANNFRDPTTAWQGPDKVWRIIVGSLINDHGTALLYRSRDFVNWTKSQTPLHSSNKTGMWECPDFYP
VSTRTGVETSVQNADTQHVLKASFNGNDYYIIGKYVPETDTYLVETDFLDAGSDLRYDYGEFYASKTFFDAAKKRRILWA
WIQESDSSSADIEKGWSGLQSIPRSVLLDQTGRQLVQWPIKEIEELRENQVTLLNKEVRGGSVLEVPGITASQVDVEVSF
DFPHFKEAEVLDPSWVDPQLLCTQKNASVKGSIGPFGLLVLASKDLTEQTAIFFHIFKTHNKKYVVLMCSDQSRSSVRQD
VDKTSYGAFVDIDPLREKISLRGLIDHSIVESFGGEGRSCITARVYPELAINKEAHLYVFNNGTQSVKISRLDAWSMKKA
EIVPTNRRRNSHFN*
CDS seq >Vv.22512.6
ATGGAGATATCTGCAATTTGGGCTGTTGGGTTGTGCCTTTTTCTGGCTAGACATGGGATTGAGGCAGAGGCCTCTTATCC
TAGTTGCAGAAATCTTCAATCTAATCCAACAGAGCAGCCTTACAGGACTGCCTACCACTTCCAGCCTCCGAAAAACTGGA
TGAATGACCCTAATGGGCCAATGTACTACAATGGTGTTTACCATCTGTTCTATCAGTACAATCCCTATGCTGCAGTATGG
GGAAACATTACATGGGCCCATTCCATATCTTATGATCTTGTCAATTGGGTTCATCTTGATCATGCTCTTAATCCAACTGA
TCCTTTTGACATCAATGGTTGTTGGACTGGTTCTGCTACAATACTTCCCGGAGAAGAACCTGTCATTATATACACTGGGG
CAGATACTCAAAACCGACAAGTCCAAAACATGGCAGTGCCCAAGAACATATCTGATCCACTCCTTAGAGAATGGATAAAA
TCACCCCGTAATCCCCTAATGAGTCCTACTAACGGCATTGATGCAAACAATTTCAGAGACCCTACCACTGCTTGGCAAGG
CCCAGACAAAGTATGGAGAATCATTGTTGGAAGCCTGATAAATGATCATGGTACAGCCCTTCTTTATCGAAGTAGAGATT
TTGTGAACTGGACAAAGAGCCAAACCCCTCTTCATTCATCCAATAAAACTGGAATGTGGGAGTGTCCAGACTTCTACCCT
GTCAGTACCAGAACTGGGGTTGAGACCTCTGTTCAAAATGCAGATACACAGCATGTGCTTAAGGCAAGCTTCAATGGGAA
TGACTACTACATAATAGGAAAATATGTGCCTGAAACCGATACCTATCTGGTCGAGACTGACTTCTTGGATGCTGGTTCGG
ATTTGAGATATGATTATGGGGAATTTTATGCTTCCAAAACATTTTTTGATGCTGCGAAAAAGCGGCGGATACTGTGGGCC
TGGATACAAGAATCTGACAGTTCATCGGCTGATATTGAAAAAGGGTGGTCTGGGCTTCAGTCCATTCCTAGGAGTGTTTT
GCTCGATCAAACTGGACGGCAATTAGTACAGTGGCCTATCAAAGAAATCGAGGAACTACGTGAAAACCAAGTGACCCTCT
TAAATAAGGAGGTCAGGGGTGGTTCTGTACTTGAAGTTCCTGGTATTACAGCTTCACAGGTTGATGTAGAAGTTTCATTT
GATTTCCCACATTTCAAAGAAGCAGAGGTCTTGGATCCCAGTTGGGTTGATCCCCAACTGCTCTGTACTCAAAAGAATGC
ATCTGTTAAAGGCAGCATTGGGCCATTTGGTCTGTTGGTTTTGGCCTCTAAGGATCTGACAGAACAAACTGCAATCTTCT
TTCACATATTCAAAACTCATAATAAGAAATACGTTGTGCTTATGTGCAGTGATCAGAGCAGGTCATCTGTGAGGCAAGAC
GTTGATAAAACAAGCTATGGAGCTTTTGTTGATATAGATCCTCTTCGTGAGAAGATTTCCCTAAGAGGCTTGATAGACCA
TTCTATTGTTGAGAGTTTTGGTGGGGAAGGGAGGAGCTGCATAACTGCAAGGGTTTATCCAGAGTTGGCTATTAATAAAG
AAGCACACTTGTATGTATTTAACAATGGAACTCAAAGTGTGAAAATCTCAAGACTTGATGCTTGGAGCATGAAGAAAGCT
GAGATTGTTCCTACCAATAGAAGAAGAAACTCCCATTTCAACTAA