
Microexon ID | Vv_4:943987-943995:- |
Species | Vistis vinifera | Coordinates | 4:943987..943995 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCTAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CCTTACAGGACTGCCTACCACTTCCAGCCTCCCAAAAACTGGATGAATGATCCTAATGGGCCAATGTACTACAATGGAGTTTACCATCTGTTCTATCAGTACAATCCC |
Microexon-tag Amino Acid Seq | PYRTAYHFQPPKNWMNDPNGPMYYNGVYHLFYQYNP |
Microexon-tag spanning region | 943220-944176 |
Microexon-tag prediction score | 0.9753 |
Overlapped with the annotated transcript (%) | 91.67 |
New Transcript ID | VIT_04s0008g01140.t01x |
Reference Transcript ID | VIT_04s0008g01140.t01 |
Gene ID | VIT_04s0008g01140 |
Gene Name | NA |
Vv_4:943987-943995:- does not have available information here.
Microexon DNA seq | ATCCTAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CCTTACAGGACTGCCTACCACTTCCAGCCTCCCAAAAACTGGATGAATGATCCTAATGGGCCAATGTACTACAATGGAGTTTACCATCTGTTCTATCAGTACAATCCC |
Microexon-tag Amino Acid seq | PYRTAYHFQPPKNWMNDPNGPMYYNGVYHLFYQYNP |
Transcript ID | Vv.22512.1 |
Gene ID | Vv.22512 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 6.1e-102 |
Motif start | 67 |
Motif end | 379 |
Protein seq | >Vv.22512.1 MLQSINCHRDGGKSAVKLRKEMGRFGIWVVGLCLMVGGHGIEGETSHHSYRNLQSDPADQPYRTAYHFQPPKNWMNDPNG PMYYNGVYHLFYQYNPYAAVWGNITWAHSTSYDLVNWVHLELAIKPTDPFDINGCWSGSATILTGEEPVIIYTGKDSQNR QVQNLSVPKNISDPLLREWIKSPHNPLMTPIDGIDASNFRDPTTAWQGSDKVWRILVGSLINGHGTALLYRSRDFVNWNK SQTPLHSSNKTGMWECPDFYPVSISSRNGVETSVQNAETRHVLKASFNGNDYYIMGKYVPETDTYLVETGFLDAGSDLRY DYGKFYASKTFFDAAKKRRILWAWIQEADKDTEKGWSGLQSFPRSVLLDQNGQRLVQWPVKEIAILHKNQVTFHNKELRG GSVIEVSGITASQADVEVSFDFPHLEEAELMDPSWTDPQALCSRKNVSVKGGIGPFGLLVLASNNLTEQTAIFFRIFKST QEKHIVLMCSDQSRSSLRQDVDKTIYGAFVDIDLNHEQISLRSLIDHSIVESFGGKGKTCITARVYPELAINTEAHLYAF NSGNQTLNISTLSAWSMKNAEMVPTN* |
CDS seq | >Vv.22512.1 ATGCTTCAAAGTATTAATTGCCATAGGGACGGAGGGAAATCTGCTGTAAAGCTGAGGAAAGAGATGGGGAGATTTGGGAT TTGGGTTGTGGGGTTGTGCCTTATGGTGGGTGGACATGGGATTGAGGGAGAGACCTCTCATCATAGTTACAGAAATCTTC AATCTGATCCAGCGGACCAGCCTTACAGGACTGCCTACCACTTCCAGCCTCCCAAAAACTGGATGAATGATCCTAATGGG CCAATGTACTACAATGGAGTTTACCATCTGTTCTATCAGTACAATCCCTATGCTGCAGTATGGGGTAACATTACATGGGC ACATTCCACATCTTATGATCTTGTCAATTGGGTTCATCTTGAACTTGCTATTAAACCAACTGACCCTTTTGACATCAATG GTTGCTGGTCTGGTTCTGCCACAATCCTTACCGGAGAAGAACCTGTCATTATATACACTGGAAAAGATTCTCAAAACCGC CAAGTCCAAAACTTGTCTGTGCCCAAGAACATATCTGACCCACTCCTTAGAGAATGGATAAAATCACCCCATAATCCTCT AATGACTCCTATTGATGGCATTGATGCAAGCAATTTCAGAGACCCTACCACTGCTTGGCAAGGCTCAGACAAAGTATGGA GAATTCTTGTTGGAAGCCTGATAAATGGTCATGGCACAGCACTTCTTTATCGAAGTAGAGACTTTGTGAACTGGAATAAG AGCCAAACCCCTCTTCATTCATCCAATAAAACTGGAATGTGGGAGTGTCCAGACTTCTACCCTGTCAGTATTAGCAGCAG AAATGGGGTTGAAACCTCTGTTCAAAATGCAGAGACACGCCATGTGCTTAAGGCAAGCTTCAATGGGAATGACTACTACA TAATGGGAAAATATGTGCCTGAAACCGATACCTATCTGGTTGAGACTGGTTTCCTGGATGCGGGTTCAGATTTGAGATAT GATTATGGGAAATTTTATGCATCCAAAACATTTTTTGATGCTGCGAAAAAGAGGCGGATACTGTGGGCCTGGATACAAGA AGCTGACAAAGATACTGAAAAAGGATGGTCTGGGCTTCAGTCCTTCCCTAGAAGTGTTTTGCTCGATCAAAATGGCCAAC GATTAGTACAGTGGCCGGTCAAAGAAATAGCGATACTACACAAGAACCAAGTGACCTTCCACAATAAGGAGCTGAGGGGT GGTTCTGTAATTGAAGTTTCTGGTATCACAGCTTCTCAGGCTGATGTAGAAGTTTCATTTGATTTCCCACATTTGGAAGA AGCTGAGCTGATGGATCCAAGTTGGACTGATCCCCAAGCCCTCTGTAGTCGAAAGAATGTATCAGTTAAAGGCGGGATCG GGCCATTTGGCTTGTTGGTTTTGGCTTCAAACAATTTGACAGAACAAACTGCAATCTTCTTTCGCATCTTCAAAAGTACT CAAGAGAAACACATCGTGCTTATGTGCAGTGATCAGAGCAGGTCCTCTTTGAGACAAGACGTGGACAAAACCATCTATGG AGCTTTTGTTGATATAGACCTTAATCACGAGCAGATTTCGCTCAGAAGCTTGATTGACCATTCTATTGTTGAGAGTTTTG GGGGGAAGGGGAAGACTTGCATTACTGCCAGGGTTTATCCAGAGTTGGCTATTAATACAGAAGCACACCTTTATGCATTT AACAGTGGAAATCAGACTCTGAATATCTCAACACTTAGTGCTTGGAGCATGAAGAATGCTGAGATGGTTCCTACCAATTG A |