
Microexon ID | Ta_7D:4654144-4654152:- |
Species | Triticum Aestivum | Coordinates | 7D:4654144..4654152 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAGCGAGCCACGTTCCATTTCCAGCCCGAGAAGAACTTCATGAGCGATCCCAACGGTTTGGTATACTACCGTGGATGGTACCACATGTTCTACCAGTACAACCCG |
Microexon-tag Amino Acid Seq | WQRATFHFQPEKNFMSDPNGLVYYRGWYHMFYQYNP |
Microexon-tag spanning region | 4652793-4654355 |
Microexon-tag prediction score | 0.9281 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS7D02G009700.1x |
Reference Transcript ID | TraesCS7D02G009700.1 |
Gene ID | TraesCS7D02G009700 |
Gene Name | NA |
Transcript ID | TraesCS7D02G009700.1 |
Protein ID | |
Gene ID | TraesCS7D02G009700 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.50E-90 |
Motif start | 112 |
Motif end | 429 |
Protein seq | >TraesCS7D02G009700.1 MHPESTNFCFLQCSSGAAMESHAVPSEQPAYKPLPSTVNEDAHEHQSGGMRWRACAALLAASAVVLVVVLVTATTPGGGA RVDQASVNGADEDAGGFPWSNEMLQWQRATFHFQPEKNFMSDPNGLVYYRGWYHMFYQYNPKGIAWAFGILWGHAASRDI VHWCQLPLAVLPDQWYDIQGVLSGTITVLPNGTLIMLYTGATNVSTVEVQCVAVPDDPNDPLLRRWTKHPANPVLFSPPW ISTNDFRDPTSAWYDGSDHTWRTVLGSKDDHNGHHAGIAFMYKTKDFLNYELVPGILHRVENTGEWECIDFYPVGGGNNS SEVLYVLKASMDDERHDYYSLGRYDAAANTWTPVDPEADLGIGLRYDWGKLYASSSFYDPVKRRRIMMGYVGEVDSAKAD VAKGWASIQSVPRTVALDEKTRTNLLLWPVEEIETLRLNATELSDITIETGFVFYVPLSQADQLDIEASFRLDASAIAAL NEADIGYNCSNSGGAASRGALGPFGLIVLASSDCCGEQTAVYFYVSRGLDGALQTNFCQDESRSSRARDVTKRVVGSTVP VLDGEALSMRVLVDHSIVQSFAMGGRCTMTSRVYPTEAIYEAAGVYLFNNGTNSSVVAERLVVHEMDSAPNKIITDDKYL HFE* |
CDS seq | >TraesCS7D02G009700.1 ATGCATCCAGAGTCCACCAATTTTTGTTTCTTGCAGTGCTCGAGCGGCGCCGCGATGGAGTCACACGCCGTTCCTAGCGA GCAGCCCGCGTACAAGCCGCTGCCATCCACCGTCAACGAGGACGCCCATGAGCATCAGAGCGGCGGCATGAGGTGGCGTG CGTGCGCTGCCTTGCTGGCGGCCTCAGCCGTGGTGCTGGTGGTGGTGCTGGTCACCGCCACCACGCCGGGAGGAGGAGCC AGGGTGGACCAGGCGTCGGTCAATGGCGCCGACGAGGATGCCGGCGGGTTCCCGTGGAGCAACGAGATGCTGCAGTGGCA GCGAGCCACGTTCCATTTCCAGCCCGAGAAGAACTTCATGAGCGATCCCAACGGTTTGGTATACTACCGTGGATGGTACC ACATGTTCTACCAGTACAACCCGAAGGGTATTGCTTGGGCCTTTGGCATTTTGTGGGGCCATGCCGCGTCCCGAGACATC GTCCACTGGTGCCAACTTCCATTAGCTGTGCTTCCTGACCAGTGGTATGACATCCAAGGTGTCTTGTCAGGCACCATCAC TGTGCTTCCTAACGGCACACTCATCATGCTCTACACTGGTGCCACCAATGTATCCACCGTTGAGGTCCAGTGCGTTGCCG TCCCCGACGACCCAAACGATCCCCTCCTCCGCCGCTGGACCAAGCACCCCGCCAACCCCGTCCTCTTCTCGCCACCGTGG ATCAGCACCAACGACTTCCGAGACCCCACCTCCGCGTGGTATGATGGCTCTGATCACACATGGCGCACCGTCCTCGGGTC CAAGGATGACCACAATGGTCACCACGCTGGCATCGCCTTCATGTACAAGACTAAGGACTTCCTTAACTATGAGCTCGTCC CGGGTATCTTGCACCGTGTCGAGAACACCGGCGAGTGGGAGTGCATCGACTTCTACCCGGTCGGTGGCGGCAACAACTCA TCAGAAGTGTTGTACGTGCTGAAGGCGAGCATGGACGATGAACGACATGACTACTACTCACTGGGGAGGTACGACGCGGC GGCAAACACATGGACCCCAGTGGACCCTGAGGCCGACTTGGGGATCGGGCTAAGGTACGACTGGGGCAAGCTTTATGCAT CCAGCTCATTCTATGATCCGGTGAAGCGGCGGCGCATTATGATGGGTTATGTCGGTGAGGTCGACTCCGCGAAGGCCGAC GTAGCCAAAGGATGGGCCTCAATCCAGTCAGTTCCAAGGACGGTGGCTCTGGACGAGAAAACCAGGACAAACCTCCTCTT ATGGCCTGTGGAGGAGATCGAGACCCTTCGCCTCAATGCCACCGAACTCAGCGACATCACCATTGAAACTGGCTTTGTCT TCTATGTCCCGCTCAGCCAAGCTGATCAACTCGACATCGAGGCCTCCTTCCGCCTCGACGCTTCTGCTATCGCTGCCCTC AATGAGGCCGACATCGGCTACAACTGCAGCAACAGCGGTGGTGCTGCCTCCCGCGGTGCGCTTGGCCCCTTTGGCCTCAT CGTCCTTGCATCCAGCGACTGTTGTGGTGAGCAGACGGCAGTGTACTTCTATGTGTCCAGGGGCCTCGACGGGGCCCTTC AGACCAATTTTTGCCAAGACGAGTCACGTTCTTCACGAGCCAGGGACGTGACGAAGCGGGTGGTGGGAAGCACGGTACCA GTTCTAGATGGTGAGGCTTTGTCGATGAGGGTGCTTGTGGACCACTCCATTGTGCAGAGCTTTGCGATGGGCGGGAGGTG CACAATGACATCACGGGTGTATCCGACGGAGGCGATCTATGAGGCGGCAGGGGTGTACCTGTTCAATAATGGCACCAACA GTAGTGTGGTGGCGGAAAGACTTGTCGTGCACGAGATGGACTCCGCACCCAACAAGATCATCACGGATGATAAATATTTG CATTTTGAATGA |
Ta_7D:4654144-4654152:- does not have available information here.