
Microexon ID | Ta_7D:4518368-4518376:- |
Species | Triticum Aestivum | Coordinates | 7D:4518368..4518376 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | TGGCAGCGCAGCGGCTACCATTTCCAGACGGCCAAGAACTACATGAGCGATCCCAACGCTCCCATGTACTACCATGGATGGTACCACTTCTTCTACCAGTACAACCCG |
Microexon-tag Amino Acid Seq | WQRSGYHFQTAKNYMSDPNAPMYYHGWYHFFYQYNP |
Microexon-tag spanning region | 4508464-4518565 |
Microexon-tag prediction score | 0.9548 |
Overlapped with the annotated transcript (%) | 2.78 |
New Transcript ID | TraesCS7D02G009400.2x |
Reference Transcript ID | TraesCS7D02G009400.2 |
Gene ID | TraesCS7D02G009400 |
Gene Name | NA |
Transcript ID | TraesCS7D02G009400.2 |
Protein ID | |
Gene ID | TraesCS7D02G009400 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 6.40E-93 |
Motif start | 89 |
Motif end | 408 |
Protein seq | >TraesCS7D02G009400.2 MGSHGKPPLPYAYKPLPSGAAAADADGERTGWTRWRVCATVLTASAMVVVVVGATLLAGFRVDQAVDEEAAGGFPWSNEM LQWQRSGYHFQTAKNYMSDPNGLMYYRGWYHMFFQYNPVGTDWDDGMEWGHAVSRNLVTWRTLPIAMVADQWYDILGVLS GSMTVLPNGTVIMIYTGATNASAIEVQCIATPADPNDPFLRRWTKHPANPVIWSPPGIGTKDFRDPMTAWYDESDDTWRT LLGSKDDQDGHHDGIAMMYKTKDFLNYELIPGILHRVERTGEWECIDFYPVGRRSSDNSSEMLHVLKASMDDERHDYYSL GTYDSAANTWTPIDPDLDLGIGLRYDWGKFYASTSFYDPAKKRRVLMGYVGEVDSKRADVVKGWASIQSVPRTIALDEKT RTNLLLWPVEEIETLRLNATELSDVTMNTGSVIHIPLRQGTQLDIEATFHLDASAVAALNEADVGYNCSSSGGAVNRGAL GPFGLLVLAAGDRRGEQTAVYFYVSRGLDGGLHTSFCQDELRSSRAKDVTKRVIGSTVPVLDGEAFSMRVLVDHSIVQGF AMGGRTTMTSRVYPMEAYQEAKVYLFNNATGASVMAERLVVHEMDSAHNQLSNMDDYSYVQ* |
CDS seq | >TraesCS7D02G009400.2 ATGGGGTCACACGGCAAGCCACCGCTACCGTACGCGTACAAGCCGCTGCCCTCCGGCGCCGCCGCCGCCGACGCCGATGG TGAGCGGACCGGCTGGACGAGGTGGCGCGTGTGCGCCACCGTGCTGACGGCCTCGGCCATGGTGGTGGTGGTGGTCGGCG CCACGCTCCTGGCAGGGTTCAGGGTGGACCAGGCCGTCGACGAGGAGGCGGCGGGCGGGTTCCCGTGGAGCAACGAGATG CTGCAGTGGCAGCGCAGCGGCTACCATTTCCAGACGGCCAAGAACTACATGAGCGATCCCAACGGTCTGATGTACTACCG CGGATGGTACCACATGTTCTTCCAGTACAACCCGGTGGGCACCGATTGGGACGACGGCATGGAGTGGGGCCACGCCGTCT CTCGGAACCTTGTCACGTGGCGCACCCTCCCTATTGCCATGGTGGCCGACCAGTGGTACGACATCCTCGGGGTCCTCTCG GGCTCTATGACGGTGCTACCCAATGGCACCGTCATCATGATCTACACGGGGGCCACCAACGCCTCCGCCATTGAGGTGCA GTGCATCGCCACCCCCGCCGACCCCAACGACCCCTTCCTCCGCCGCTGGACCAAGCACCCCGCGAACCCCGTCATCTGGT CGCCGCCGGGGATCGGCACCAAGGATTTTCGAGACCCGATGACCGCTTGGTACGATGAATCTGATGACACATGGCGCACC CTCCTCGGGTCCAAGGACGACCAGGACGGCCACCACGATGGGATCGCCATGATGTACAAGACCAAGGACTTCCTTAACTA TGAGCTCATCCCGGGCATCTTGCATCGAGTCGAGCGCACCGGCGAGTGGGAGTGCATCGACTTCTACCCTGTCGGTCGCC GTAGCAGCGACAACTCATCGGAGATGTTGCACGTGTTGAAGGCGAGCATGGACGATGAACGACACGACTACTACTCGCTA GGCACGTACGACTCGGCAGCAAACACGTGGACGCCGATTGACCCGGACCTCGACTTGGGGATCGGGCTGAGGTACGATTG GGGTAAGTTTTATGCGTCCACCTCGTTCTATGATCCGGCGAAGAAGCGGCGCGTGCTGATGGGGTACGTCGGCGAGGTCG ACTCCAAGCGGGCTGATGTCGTGAAGGGATGGGCCTCAATTCAGTCAGTTCCAAGGACAATTGCTCTCGACGAGAAGACC CGGACGAACCTCCTCCTCTGGCCCGTGGAGGAGATTGAGACCCTCCGCCTCAATGCCACTGAACTTAGCGACGTCACCAT GAACACCGGCTCCGTCATCCATATCCCCCTCCGCCAAGGCACTCAGCTTGACATCGAGGCAACTTTCCACCTTGATGCTT CTGCCGTCGCTGCCCTCAATGAGGCCGATGTGGGCTACAACTGCAGCAGCAGCGGCGGTGCTGTTAACCGCGGCGCGCTA GGCCCCTTCGGCCTCCTCGTCCTCGCTGCTGGTGACCGCCGCGGCGAGCAAACGGCGGTGTACTTCTACGTGTCTAGGGG CCTTGATGGAGGCCTCCATACCAGCTTCTGCCAAGACGAGTTACGGTCGTCACGGGCCAAGGACGTGACAAAGCGGGTGA TTGGGAGCACGGTGCCGGTGCTCGACGGCGAGGCTTTCTCAATGAGGGTGCTCGTGGACCACTCCATCGTGCAGGGCTTC GCGATGGGCGGGAGGACCACGATGACGTCGCGGGTGTACCCGATGGAGGCCTATCAGGAGGCAAAAGTGTACTTGTTCAA CAATGCCACCGGTGCCAGCGTTATGGCGGAAAGGCTCGTCGTGCACGAGATGGACTCGGCACACAACCAGCTCTCCAATA TGGACGATTACTCGTATGTTCAATGA |
Ta_7D:4518368-4518376:- does not have available information here.