
Microexon ID | Ta_7D:4414192-4414200:- |
Species | Triticum Aestivum | Coordinates | 7D:4414192..4414200 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAATG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | TGGCAGCGCACTGGTTACCATTTCCAGCCGGACGGCAACTTCATGAACGATCCCAATGCTCCGATGTATTACCGCGGACTGTACCACTTCTTCTACCAGTACAATCCC |
Microexon-tag Amino Acid Seq | WQRTGYHFQPDGNFMNDPNAPMYYRGLYHFFYQYNP |
Microexon-tag spanning region | 4414053-4414466 |
Microexon-tag prediction score | 0.949 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS7D02G009100.1x |
Reference Transcript ID | TraesCS7D02G009100.1 |
Gene ID | TraesCS7D02G009100 |
Gene Name | NA |
Transcript ID | TraesCS7D02G009100.1 |
Protein ID | |
Gene ID | TraesCS7D02G009100 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.50E-93 |
Motif start | 148 |
Motif end | 462 |
Protein seq | >TraesCS7D02G009100.1 MAPPRDRRMSRSRESLSSSEAQAVTMKSRGASAVPDTPPVMSGHAPQQHQRGGGGGTRWRECAAVLGAVAVVALVVTHAL HNVGDDLNDVADPVARLRAATDEKAALLSKKTPGEAQAEQDIKAAAGADADGSPWSSEMLLWQRTGYHFQPDGNFMNDPN APMYYRGLYHFFYQYNPKGVVWNKIAWGHAVSSDLVHWRHLPVAMVPDQWYDINGVLTGSATMLPNGTVILLYTGNSDTF AQVQCLAFPADPEDPLLRIWTKHPANPVIFPPPGIGDRDFRDPMAAWFDKSDNTWRTIIGSKDDHGHAGIALMYKTKDFI KYELIPDPVHRVDGTGMWECIDLYCISGGSNSSEEVIYVMKASVNDEWHDYYALGRFDAEANRWTPLDPEADVGIGMRVD WGKFYASTSFYDPVKQRRVSWGFVGETDSPNTDIAKGWASLQGIPRKVVLDEKTRTNILQWPVEEIDTLRYNATKFSGIT IESSSVITLPLRQVSQLDIEASFRLNASAIAALHEADVSYNCSTSGGATERGALGPFGLLIHATNSGSEQLAVYFYIYKG LDGGLRTQFCHDESGSSRAKELLKRVVGSTVPVLHGEALSARVLVDHSIVESFVMGGRMTVTSRVYPMEAIHAAGRVCVF NNATGSAVTVEKLVVHEMASAPIQPYRDA* |
CDS seq | >TraesCS7D02G009100.1 ATGGCTCCTCCACGGGACCGCAGGATGAGCCGATCAAGAGAGTCCCTTTCCAGTTCCGAAGCGCAGGCCGTGACGATGAA GTCACGCGGCGCTAGCGCTGTCCCCGACACGCCGCCGGTCATGTCTGGGCACGCGCCGCAGCAGCACCAGCGGGGCGGCG GCGGCGGCACCAGGTGGCGCGAGTGCGCCGCCGTGCTAGGCGCCGTGGCCGTGGTGGCGCTAGTCGTCACCCACGCGCTC CACAACGTGGGCGACGATCTCAACGACGTGGCTGACCCGGTAGCCCGTCTCCGGGCAGCCACCGACGAGAAAGCGGCCCT TCTGTCGAAGAAGACTCCCGGGGAGGCCCAAGCGGAGCAGGACATCAAAGCCGCCGCCGGCGCCGATGCCGACGGGTCCC CGTGGAGCAGCGAGATGCTGCTGTGGCAGCGCACTGGTTACCATTTCCAGCCGGACGGCAACTTCATGAACGATCCCAAT GCTCCGATGTATTACCGCGGACTGTACCACTTCTTCTACCAGTACAATCCCAAGGGCGTCGTCTGGAACAAGATCGCCTG GGGCCACGCCGTGTCGTCGGACCTGGTCCACTGGCGCCATCTCCCCGTTGCCATGGTGCCCGACCAGTGGTACGACATCA ACGGCGTCTTGACGGGATCCGCCACCATGCTGCCCAATGGCACGGTCATCCTGCTTTACACGGGCAACAGTGACACCTTT GCCCAGGTTCAGTGCCTTGCCTTCCCTGCAGACCCTGAAGACCCCCTCCTCCGTATCTGGACCAAGCACCCTGCCAACCC CGTCATCTTCCCGCCCCCCGGCATTGGCGACAGGGACTTCCGCGATCCCATGGCCGCGTGGTTTGATAAGTCCGACAACA CATGGCGCACCATCATAGGGTCCAAGGATGACCATGGTCATGCCGGTATTGCCCTCATGTACAAGACGAAAGACTTCATC AAGTACGAGCTCATCCCGGACCCGGTCCACCGTGTCGACGGCACCGGCATGTGGGAGTGCATTGACCTCTACTGCATTAG CGGTGGCAGCAACTCATCAGAGGAGGTGATATACGTGATGAAGGCGAGTGTGAACGATGAGTGGCATGACTACTACGCCC TGGGGAGGTTTGATGCAGAGGCCAACAGGTGGACGCCATTGGACCCGGAAGCTGATGTGGGGATAGGCATGAGGGTCGAT TGGGGTAAGTTTTATGCCTCTACATCCTTCTATGATCCGGTCAAGCAGCGGCGCGTGAGCTGGGGGTTTGTCGGCGAGAC CGACTCACCCAACACCGACATAGCCAAGGGATGGGCAAGCCTCCAGGGGATTCCAAGGAAAGTAGTGCTAGACGAGAAAA CCCGGACGAACATCCTCCAATGGCCGGTGGAGGAGATCGACACCCTCCGCTACAACGCCACCAAGTTCAGCGGCATCACC ATCGAGTCTAGCTCTGTCATAACCCTCCCTCTCCGCCAAGTTTCTCAACTCGATATTGAGGCATCCTTTCGCCTCAATGC TTCCGCCATCGCCGCCCTCCACGAGGCCGATGTTAGCTACAACTGCAGTACAAGTGGTGGTGCCACTGAACGCGGCGCGC TTGGCCCCTTTGGCCTTCTCATCCATGCCACCAACAGCGGCAGCGAACAACTGGCAGTGTACTTTTACATTTACAAGGGT CTTGATGGGGGCCTCCGGACCCAGTTCTGCCATGATGAGTCGGGGTCATCGCGAGCCAAGGAACTGCTGAAGCGTGTGGT GGGAAGCACCGTACCCGTGCTCCACGGAGAGGCTTTATCCGCAAGGGTGCTCGTGGATCATTCGATTGTGGAGAGCTTTG TGATGGGTGGGAGGATGACGGTGACGTCACGCGTGTACCCTATGGAGGCTATCCATGCGGCTGGTAGGGTGTGCGTTTTC AACAACGCCACCGGGTCTGCCGTTACCGTCGAGAAGCTCGTGGTGCACGAGATGGCGTCAGCACCAATACAACCATACCG TGATGCATGA |
Ta_7D:4414192-4414200:- does not have available information here.