
Microexon ID | Ta_7D:4291588-4291596:- |
Species | Triticum Aestivum | Coordinates | 7D:4291588..4291596 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | TGGCAGCGCACCGGGTTCCATTTCCAGCCCGAGAAGAACTACATGAACGATCCCAACGCTCCCATGTACTACCGTGGACGGTACCACTTCTTCTACCAGTACAACCCC |
Microexon-tag Amino Acid Seq | WQRTGFHFQPEKNYMNDPNAPMYYRGRYHFFYQYNP |
Microexon-tag spanning region | 4291419-4291789 |
Microexon-tag prediction score | 0.9619 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS7D02G008900.1x |
Reference Transcript ID | TraesCS7D02G008900.1 |
Gene ID | TraesCS7D02G008900 |
Gene Name | NA |
Transcript ID | TraesCS7D02G008900.1 |
Protein ID | |
Gene ID | TraesCS7D02G008900 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.60E-97 |
Motif start | 123 |
Motif end | 437 |
Protein seq | >TraesCS7D02G008900.1 MAPRDRRTTRSKDFLLSSGTATVAVKSPCAVPDTPPVPFAYGGLLYQQSGGRRRWRECTVVLGAVAMVALFVTHALLPRA SVLSEETPGETRAEQNIMVSAGADADGFPWSNEMLQWQRTGFHFQPEKNYMNDPNAPMYYRGRYHFFYQYNPTGVVWGNI TWGHAVSRDLVHWRHLPLAMVPDQWYDIHGVLTGSATILPNGTVIVLYTGKTDTSAQVQCLALPADPDDPLLVNWTKHPA NPVILPPPGIGLQDFRDPTTAWFDQSDLTWRTLIGSKDDNGHAGIALMYKTKDFIRYELIPRVLHRVEGTGMWECVDFYQ VGGGNNSSEEALYVLKASMDDERHDYYALGRYDAATNTWTPLDPELDVGIGLRYDWGKFFAATSFYDPVKRRRVMWAYVG ETDSLSANVAKGWASVQTIPRTVELDEKTRTNLLQWPVEEIETLRFNSTDFGVITIHNGSIIPLCLRQATQLDIEASFRL DTSASAIINEADVNYNCSTSGGASTMGVLGPFGLLIHATGNGGSEQLAVYFYVSRGRDGALRTHFCHDELLSSRANDVMK RVVGSTVPVLDGEALSVRVLVDHSIVESFAMGGRLTATSRVYPMEAIHMAAGVYLFNNATGSSITVEKLVVHEMASASYK QTFGAADA* |
CDS seq | >TraesCS7D02G008900.1 ATGGCTCCTCGAGACCGCAGGACGACCCGATCAAAAGATTTCCTCCTGAGCTCCGGAACGGCGACCGTGGCCGTGAAGTC ACCCTGCGCCGTCCCGGACACGCCGCCGGTCCCGTTCGCGTACGGGGGGCTGCTGTACCAGCAGAGCGGCGGGCGGCGGA GGTGGCGCGAGTGCACCGTCGTGCTGGGCGCCGTGGCCATGGTGGCGCTCTTCGTCACCCACGCGCTTCTCCCAAGGGCC AGCGTGTTGTCCGAGGAGACGCCTGGGGAGACACGAGCGGAGCAGAACATCATGGTCTCCGCCGGCGCCGATGCCGACGG GTTCCCGTGGAGCAACGAGATGCTGCAGTGGCAGCGCACCGGGTTCCATTTCCAGCCCGAGAAGAACTACATGAACGATC CCAACGCTCCCATGTACTACCGTGGACGGTACCACTTCTTCTACCAGTACAACCCCACGGGCGTCGTCTGGGGCAACATC ACCTGGGGCCACGCGGTGTCGCGGGACCTGGTCCACTGGCGCCACCTTCCCCTCGCCATGGTGCCCGACCAGTGGTACGA CATCCACGGCGTCTTGACGGGCTCCGCCACCATACTCCCCAACGGCACGGTCATTGTGCTCTACACGGGGAAAACCGACA CCTCCGCTCAGGTCCAGTGCCTCGCCCTTCCCGCCGACCCAGATGACCCTCTCCTTGTCAACTGGACCAAGCATCCTGCC AACCCCGTCATCCTCCCGCCCCCCGGCATCGGCCTCCAAGACTTCCGCGACCCCACCACCGCCTGGTTTGACCAGTCTGA CCTGACATGGCGCACCCTCATCGGCTCCAAGGACGACAACGGCCATGCCGGCATCGCCTTGATGTACAAAACCAAAGACT TCATCAGGTACGAGCTCATCCCGAGGGTGCTCCACCGCGTCGAGGGCACTGGCATGTGGGAGTGCGTCGACTTCTACCAG GTCGGCGGCGGCAACAACTCCTCTGAGGAGGCCCTGTACGTGTTGAAGGCGAGCATGGACGATGAACGGCATGACTACTA CGCGCTTGGGAGGTATGATGCGGCGACCAACACATGGACACCACTGGACCCAGAGCTGGACGTGGGGATCGGGCTGAGGT ATGACTGGGGAAAGTTTTTCGCTGCCACGTCTTTCTACGACCCGGTGAAACGGCGGCGCGTGATGTGGGCCTATGTCGGC GAGACCGACTCCTTGAGTGCCAACGTTGCCAAGGGATGGGCTTCCGTCCAGACGATTCCGAGGACGGTAGAGTTGGATGA GAAGACCCGGACGAACCTCCTCCAATGGCCGGTGGAGGAGATCGAGACCCTCCGCTTCAACAGCACCGACTTTGGCGTCA TCACTATCCACAATGGATCCATTATACCTCTCTGCCTCCGCCAAGCCACCCAGCTTGACATCGAGGCCTCCTTTCGCCTT GACACTTCCGCTAGTGCCATCATCAACGAGGCTGACGTCAACTACAACTGCAGCACCAGCGGCGGAGCCTCAACCATGGG TGTGCTTGGTCCCTTCGGCCTCCTCATCCACGCTACTGGTAATGGTGGCAGCGAACAACTCGCGGTTTACTTCTATGTAT CGAGGGGCCGTGACGGGGCACTCCGAACCCACTTCTGCCATGACGAGTTGTTGTCGTCTCGGGCGAATGATGTCATGAAG CGGGTGGTGGGCAGCACAGTGCCGGTGCTCGACGGCGAGGCTCTATCTGTGAGGGTGCTCGTGGACCATTCGATTGTGGA GAGCTTCGCAATGGGCGGGAGGTTGACGGCCACGTCGCGGGTGTACCCGATGGAAGCCATCCACATGGCAGCGGGGGTAT ACCTTTTCAACAACGCCACCGGCTCCTCCATCACCGTCGAGAAGCTTGTAGTTCATGAGATGGCCTCGGCATCTTACAAA CAGACTTTCGGGGCCGCCGACGCCTAG |
Ta_7D:4291588-4291596:- does not have available information here.