Microexon ID Ta_7D:4201534-4201542:-
Species Triticum   Aestivum
Coordinates 7D:4201534..4201542
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCCAACG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq TGGCAGCGCACCGGCTACCATTTCCAGCCGGACAAGTACTACCAGAACGATCCCAACGGTCCGGTTTACTATGGCGGATGGTACCACTTCTTCTACCAGTACAACCCG
Microexon-tag Amino Acid Seq WQRTGYHFQPDKYYQNDPNGPVYYGGWYHFFYQYNP
Microexon-tag spanning region4201338-4201752
Microexon-tag prediction score0.9431
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS7D02G008700.1x
Reference Transcript ID TraesCS7D02G008700.1
Gene ID TraesCS7D02G008700
Gene Name 1-SST
Transcript ID TraesCS7D02G008700.1
Protein ID
Gene ID TraesCS7D02G008700
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 6.90E-89
Motif start 126
Motif end 449
Protein seq >TraesCS7D02G008700.1
MDSSRVILIPGTPPLPYAYEQLPSSSADAKGIEEERAGGGGLRWRACAAVLAASAVVALVVAAAVFGASGAGWDAVAASV
PATPATEFPRSRGKEHGVSEKTSGAYSANAFPWSNAMLQWQRTGYHFQPDKYYQNDPNGPVYYGGWYHFFYQYNPSGSVW
EPQIVWGHAVSKDLIHWRHLPPALVPDQWYDIKGVLTGSITVLPDGKVILLYTGNTETFAQVTCLAEPADPSDPLLREWV
KHPANPVVFPPPGIGMKDFRDPTTAWFDESDGTWRTIIGSKNDSDHSGIVFSYKTKDFLSYELMPGYMYRGPKGTGEYEC
IDLYAVGGGRKASDMYNSTAEDVLYVLKESSDDDRHDWYSLGRFDAAANKWTPIDEELELGVGLRYDWGKYYASKSFYDP
VKKRRVVWAYVGETDSERADITKGWANLQSIPRTVELDEKTRTNLVQWPVEELDALRINTTDLSGITVGAGSVAFLPLHQ
TAQLDIEATFRIDASAIEALNEADVSYNCTTSSGAATRGALGPFGLLVLANRALTEQTGVYFYVSKGLDGGLRTHFCHDE
LRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAIYAAAGVYMFNNATGTSVTAEKL
VVHDMDSSYNHIYTDDDLVVVD*
CDS seq >TraesCS7D02G008700.1
ATGGATTCGTCTCGCGTCATACTCATCCCCGGCACGCCGCCGCTGCCGTACGCCTACGAGCAGCTGCCGTCCTCCTCCGC
GGACGCCAAGGGCATCGAGGAGGAGCGGGCCGGCGGCGGTGGCCTGAGGTGGCGCGCGTGCGCCGCCGTGCTGGCCGCCT
CGGCCGTGGTGGCGCTCGTCGTCGCCGCCGCGGTCTTCGGGGCCAGCGGGGCGGGCTGGGACGCGGTGGCCGCCTCCGTG
CCGGCGACCCCGGCGACGGAGTTCCCGAGGAGCAGGGGCAAGGAGCACGGCGTGTCGGAGAAGACGTCGGGGGCCTACTC
CGCCAACGCGTTCCCGTGGAGCAACGCCATGCTGCAGTGGCAGCGCACCGGCTACCATTTCCAGCCGGACAAGTACTACC
AGAACGATCCCAACGGTCCGGTTTACTATGGCGGATGGTACCACTTCTTCTACCAGTACAACCCGTCGGGCTCCGTGTGG
GAGCCCCAAATCGTGTGGGGCCACGCCGTGTCCAAGGACCTCATTCACTGGCGCCACCTCCCGCCGGCCTTGGTGCCCGA
CCAGTGGTACGACATCAAGGGCGTCCTCACCGGCTCCATCACCGTGCTCCCCGACGGCAAGGTCATCCTCCTCTACACGG
GGAACACCGAGACCTTTGCGCAGGTGACCTGCCTCGCGGAGCCCGCCGACCCGAGCGATCCCCTCCTCCGCGAGTGGGTC
AAGCACCCCGCCAACCCCGTCGTGTTCCCGCCCCCCGGCATCGGCATGAAGGACTTCCGCGACCCCACCACCGCGTGGTT
CGACGAGTCCGACGGCACGTGGCGCACCATCATCGGCTCCAAGAACGACTCGGACCACTCCGGCATCGTCTTCTCCTACA
AGACCAAGGACTTCCTCAGCTACGAGCTGATGCCGGGGTACATGTACCGCGGCCCCAAGGGCACCGGCGAGTACGAGTGC
ATCGACCTCTACGCCGTCGGCGGGGGCCGCAAGGCCAGCGACATGTACAACTCGACGGCCGAGGACGTGCTGTACGTGCT
CAAGGAGAGCAGCGACGACGACCGGCACGACTGGTACTCGCTGGGCCGGTTCGACGCCGCCGCCAACAAGTGGACGCCGA
TCGACGAGGAGCTGGAGCTCGGCGTCGGGCTGCGGTACGACTGGGGCAAGTACTACGCGTCCAAGTCCTTCTACGACCCC
GTGAAGAAGCGGCGCGTCGTGTGGGCGTACGTCGGCGAGACCGACTCGGAGCGCGCCGACATCACCAAGGGGTGGGCCAA
CCTCCAGTCGATTCCGAGGACAGTGGAGCTTGACGAGAAGACCCGGACGAACCTCGTCCAATGGCCTGTGGAGGAGCTCG
ATGCCCTCCGCATCAACACCACCGATCTCAGCGGCATCACCGTCGGCGCCGGCTCCGTTGCCTTCCTCCCCCTCCATCAG
ACCGCTCAGCTCGACATCGAGGCAACCTTCCGCATCGATGCCTCCGCCATTGAGGCCCTCAACGAGGCCGATGTTAGCTA
CAACTGCACCACCAGCAGCGGGGCTGCCACCCGCGGCGCGCTTGGCCCCTTCGGCCTCCTTGTCCTCGCCAACCGCGCCC
TGACCGAACAGACGGGAGTGTACTTCTATGTGTCCAAGGGCCTCGACGGTGGTCTTCGGACTCACTTCTGCCACGACGAG
TTGCGCTCGTCGCATGCTAGTGACGTGGTGAAGCGGGTGGTGGGTAGCACGGTGCCAGTGCTCGACGGCGAAGATTTTTC
CGTTAGGGTGCTCGTGGACCACTCCATTGTGCAGAGCTTCGCGATGGGCGGGAGGTTGACAGCAACGTCGAGGGCGTACC
CGACCGAGGCCATCTACGCGGCAGCGGGGGTCTACATGTTCAACAACGCCACCGGCACTAGCGTCACCGCCGAGAAGCTT
GTCGTGCATGATATGGACTCGTCGTACAACCATATATACACAGATGATGACTTGGTAGTCGTCGATTAG
Ta_7D:4201534-4201542:- does not have available information here.