
Microexon ID | Ta_7D:4201534-4201542:- |
Species | Triticum Aestivum | Coordinates | 7D:4201534..4201542 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAGCGCACCGGCTACCATTTCCAGCCGGACAAGTACTACCAGAACGATCCCAACGGTCCGGTTTACTATGGCGGATGGTACCACTTCTTCTACCAGTACAACCCG |
Microexon-tag Amino Acid Seq | WQRTGYHFQPDKYYQNDPNGPVYYGGWYHFFYQYNP |
Microexon-tag spanning region | 4201338-4201752 |
Microexon-tag prediction score | 0.9431 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS7D02G008700.1x |
Reference Transcript ID | TraesCS7D02G008700.1 |
Gene ID | TraesCS7D02G008700 |
Gene Name | 1-SST |
Transcript ID | TraesCS7D02G008700.1 |
Protein ID | |
Gene ID | TraesCS7D02G008700 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 6.90E-89 |
Motif start | 126 |
Motif end | 449 |
Protein seq | >TraesCS7D02G008700.1 MDSSRVILIPGTPPLPYAYEQLPSSSADAKGIEEERAGGGGLRWRACAAVLAASAVVALVVAAAVFGASGAGWDAVAASV PATPATEFPRSRGKEHGVSEKTSGAYSANAFPWSNAMLQWQRTGYHFQPDKYYQNDPNGPVYYGGWYHFFYQYNPSGSVW EPQIVWGHAVSKDLIHWRHLPPALVPDQWYDIKGVLTGSITVLPDGKVILLYTGNTETFAQVTCLAEPADPSDPLLREWV KHPANPVVFPPPGIGMKDFRDPTTAWFDESDGTWRTIIGSKNDSDHSGIVFSYKTKDFLSYELMPGYMYRGPKGTGEYEC IDLYAVGGGRKASDMYNSTAEDVLYVLKESSDDDRHDWYSLGRFDAAANKWTPIDEELELGVGLRYDWGKYYASKSFYDP VKKRRVVWAYVGETDSERADITKGWANLQSIPRTVELDEKTRTNLVQWPVEELDALRINTTDLSGITVGAGSVAFLPLHQ TAQLDIEATFRIDASAIEALNEADVSYNCTTSSGAATRGALGPFGLLVLANRALTEQTGVYFYVSKGLDGGLRTHFCHDE LRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAIYAAAGVYMFNNATGTSVTAEKL VVHDMDSSYNHIYTDDDLVVVD* |
CDS seq | >TraesCS7D02G008700.1 ATGGATTCGTCTCGCGTCATACTCATCCCCGGCACGCCGCCGCTGCCGTACGCCTACGAGCAGCTGCCGTCCTCCTCCGC GGACGCCAAGGGCATCGAGGAGGAGCGGGCCGGCGGCGGTGGCCTGAGGTGGCGCGCGTGCGCCGCCGTGCTGGCCGCCT CGGCCGTGGTGGCGCTCGTCGTCGCCGCCGCGGTCTTCGGGGCCAGCGGGGCGGGCTGGGACGCGGTGGCCGCCTCCGTG CCGGCGACCCCGGCGACGGAGTTCCCGAGGAGCAGGGGCAAGGAGCACGGCGTGTCGGAGAAGACGTCGGGGGCCTACTC CGCCAACGCGTTCCCGTGGAGCAACGCCATGCTGCAGTGGCAGCGCACCGGCTACCATTTCCAGCCGGACAAGTACTACC AGAACGATCCCAACGGTCCGGTTTACTATGGCGGATGGTACCACTTCTTCTACCAGTACAACCCGTCGGGCTCCGTGTGG GAGCCCCAAATCGTGTGGGGCCACGCCGTGTCCAAGGACCTCATTCACTGGCGCCACCTCCCGCCGGCCTTGGTGCCCGA CCAGTGGTACGACATCAAGGGCGTCCTCACCGGCTCCATCACCGTGCTCCCCGACGGCAAGGTCATCCTCCTCTACACGG GGAACACCGAGACCTTTGCGCAGGTGACCTGCCTCGCGGAGCCCGCCGACCCGAGCGATCCCCTCCTCCGCGAGTGGGTC AAGCACCCCGCCAACCCCGTCGTGTTCCCGCCCCCCGGCATCGGCATGAAGGACTTCCGCGACCCCACCACCGCGTGGTT CGACGAGTCCGACGGCACGTGGCGCACCATCATCGGCTCCAAGAACGACTCGGACCACTCCGGCATCGTCTTCTCCTACA AGACCAAGGACTTCCTCAGCTACGAGCTGATGCCGGGGTACATGTACCGCGGCCCCAAGGGCACCGGCGAGTACGAGTGC ATCGACCTCTACGCCGTCGGCGGGGGCCGCAAGGCCAGCGACATGTACAACTCGACGGCCGAGGACGTGCTGTACGTGCT CAAGGAGAGCAGCGACGACGACCGGCACGACTGGTACTCGCTGGGCCGGTTCGACGCCGCCGCCAACAAGTGGACGCCGA TCGACGAGGAGCTGGAGCTCGGCGTCGGGCTGCGGTACGACTGGGGCAAGTACTACGCGTCCAAGTCCTTCTACGACCCC GTGAAGAAGCGGCGCGTCGTGTGGGCGTACGTCGGCGAGACCGACTCGGAGCGCGCCGACATCACCAAGGGGTGGGCCAA CCTCCAGTCGATTCCGAGGACAGTGGAGCTTGACGAGAAGACCCGGACGAACCTCGTCCAATGGCCTGTGGAGGAGCTCG ATGCCCTCCGCATCAACACCACCGATCTCAGCGGCATCACCGTCGGCGCCGGCTCCGTTGCCTTCCTCCCCCTCCATCAG ACCGCTCAGCTCGACATCGAGGCAACCTTCCGCATCGATGCCTCCGCCATTGAGGCCCTCAACGAGGCCGATGTTAGCTA CAACTGCACCACCAGCAGCGGGGCTGCCACCCGCGGCGCGCTTGGCCCCTTCGGCCTCCTTGTCCTCGCCAACCGCGCCC TGACCGAACAGACGGGAGTGTACTTCTATGTGTCCAAGGGCCTCGACGGTGGTCTTCGGACTCACTTCTGCCACGACGAG TTGCGCTCGTCGCATGCTAGTGACGTGGTGAAGCGGGTGGTGGGTAGCACGGTGCCAGTGCTCGACGGCGAAGATTTTTC CGTTAGGGTGCTCGTGGACCACTCCATTGTGCAGAGCTTCGCGATGGGCGGGAGGTTGACAGCAACGTCGAGGGCGTACC CGACCGAGGCCATCTACGCGGCAGCGGGGGTCTACATGTTCAACAACGCCACCGGCACTAGCGTCACCGCCGAGAAGCTT GTCGTGCATGATATGGACTCGTCGTACAACCATATATACACAGATGATGACTTGGTAGTCGTCGATTAG |
Ta_7D:4201534-4201542:- does not have available information here.