
Microexon ID | Ta_7D:29405078-29405086:- |
Species | Triticum Aestivum | Coordinates | 7D:29405078..29405086 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | TGGCAGCGCACCGGTTACCATTTCCAGCCGGACAAGAACTACATGAACGATCCAAACGCTCCAATGTACTACCGTGGATGGTACCACTTCTTTTACCAGTACAACCCG |
Microexon-tag Amino Acid Seq | WQRTGYHFQPDKNYMNDPNAPMYYRGWYHFFYQYNP |
Microexon-tag spanning region | 29404905-29405348 |
Microexon-tag prediction score | 0.9654 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS7D02G054800.2x |
Reference Transcript ID | TraesCS7D02G054800.2 |
Gene ID | TraesCS7D02G054800 |
Gene Name | NA |
Transcript ID | TraesCS7D02G054800.2 |
Protein ID | |
Gene ID | TraesCS7D02G054800 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.70E-96 |
Motif start | 109 |
Motif end | 423 |
Protein seq | >TraesCS7D02G054800.2 MKSRAGTPPVLYSYASMQQRSGGGMRWRECVAVLGAAAMVVFVVTHSLLPGARVGDLGDVVSPVLRLRRARREEAAVPSS EKTVGEIGDEADGFPWSNAMLQWQRTGYHFQPDKNYMNDPNAPMYYRGWYHFFYQYNPEGVTWGNISWGHAVSRDMVHWH HLPLAMVPDRWYDINGVLTGSATILPDGKVVLLYTGNTDTLAQVQCVAEPADPHDPLLRTWIKHPANPVLFPPPGTYKKD FRDPMTAWFDKSDNTWRTMIGSKDNNGHAGIALMYKTKDFVKFELIPRPVHRVEGTGMWECVDFYPVRGNSNSSQEELYV LKASMDDERHDYYALGKYDAVTNTWTPLDPEADVGIGLRYNWGKLFASTTFYDPAKRRRVMWAYVGETDSNRTDLAKGWA NLQAIPRTVALDEKTRTNLLQWPVEEIETLRHNATDLSGITISTGSVFPLHLRQAAQLDIEASFRLNTSDIAAHNEADIG YNCSTSGGATNRGALGPFGLLLTNGHSEQMAMYFYMSRSLDGDLRTHFCHDESQSSLARNVVKRVVGSTVPVLNGEALSA RILVDHSIVESFVMGGRLTATSRVYPTEAIYEAAGLYVFNNATGSTLIVDKLVVHEMHSTPMQLDLFARD* |
CDS seq | >TraesCS7D02G054800.2 ATGAAGTCACGCGCCGGCACGCCGCCCGTCCTGTACTCGTACGCGTCGATGCAGCAGCGGAGCGGCGGCGGCATGAGGTG GCGCGAGTGCGTTGCCGTGCTGGGCGCCGCGGCCATGGTGGTGTTCGTCGTCACCCACTCGCTCCTCCCAGGGGCCAGGG TGGGGGATCTGGGCGACGTGGTTAGCCCAGTGCTCCGTCTCCGGAGAGCCAGGCGGGAGGAGGCGGCCGTGCCGTCGTCG GAGAAGACGGTGGGGGAAATCGGCGATGAGGCCGATGGCTTCCCGTGGAGCAACGCCATGCTGCAGTGGCAGCGCACCGG TTACCATTTCCAGCCGGACAAGAACTACATGAACGATCCAAACGCTCCAATGTACTACCGTGGATGGTACCACTTCTTTT ACCAGTACAACCCGGAGGGTGTCACGTGGGGAAACATCTCGTGGGGCCACGCCGTGTCGCGAGACATGGTCCACTGGCAC CACCTACCCCTCGCCATGGTGCCTGACCGATGGTACGACATTAACGGCGTTTTGACGGGCTCCGCCACCATACTTCCTGA TGGCAAGGTCGTCCTGCTCTACACAGGGAACACCGACACGCTCGCCCAGGTACAGTGTGTTGCCGAACCTGCAGACCCTC ATGACCCTCTCCTCCGCACCTGGATCAAGCACCCCGCCAACCCGGTCCTCTTCCCGCCCCCCGGGACATACAAAAAGGAC TTCCGTGACCCCATGACCGCATGGTTTGACAAGTCCGACAACACATGGCGCACCATGATCGGGTCCAAGGACAACAACGG GCATGCTGGCATCGCCCTCATGTACAAGACAAAAGACTTCGTCAAGTTCGAGCTCATCCCGCGTCCGGTCCACCGCGTCG AGGGCACCGGCATGTGGGAGTGCGTCGACTTCTACCCTGTTAGGGGCAATAGCAACTCATCACAGGAAGAGTTGTACGTC CTGAAGGCGAGCATGGACGATGAACGACATGACTACTACGCATTGGGAAAGTATGACGCAGTGACCAACACATGGACACC GCTGGACCCAGAAGCAGATGTGGGAATCGGACTGAGGTACAATTGGGGAAAGTTATTTGCGTCCACGACATTCTATGATC CGGCAAAGCGGCGACGTGTGATGTGGGCGTATGTTGGTGAGACAGATTCCAACCGGACCGACCTCGCCAAGGGATGGGCA AACCTCCAGGCGATTCCGAGGACGGTGGCGCTGGACGAGAAGACCCGGACGAACCTCCTCCAATGGCCGGTGGAGGAGAT TGAGACCCTCCGTCATAATGCAACTGACCTCAGTGGCATCACCATCAGCACTGGCTCCGTCTTCCCCCTGCATCTCCGGC AAGCCGCTCAGCTCGACATAGAGGCCTCCTTCCGCCTCAACACTTCTGACATCGCAGCCCACAACGAGGCCGACATCGGC TACAACTGCAGCACTAGCGGTGGTGCCACCAACCGGGGTGCGCTCGGCCCCTTCGGCCTCCTCCTCACCAACGGTCACAG TGAACAAATGGCAATGTACTTCTACATGTCTAGGAGCCTTGACGGGGACCTCCGGACCCACTTCTGCCATGACGAGTCGC AGTCATCGCTGGCCAGGAATGTTGTGAAGCGTGTGGTGGGCAGCACTGTTCCGGTGCTCAACGGAGAGGCCTTATCCGCT AGGATTCTTGTGGATCATTCCATTGTGGAGAGCTTCGTTATGGGCGGGAGATTGACGGCGACGTCCCGAGTGTACCCGAC TGAGGCCATCTATGAGGCGGCTGGGCTGTACGTTTTCAACAATGCTACCGGCTCCACTCTCATCGTCGATAAGCTCGTGG TGCATGAGATGCATTCAACACCGATGCAACTAGATCTTTTTGCACGAGATTAA |
Ta_7D:29405078-29405086:- does not have available information here.