
Microexon ID | Ta_7A:4254435-4254443:- |
Species | Triticum Aestivum | Coordinates | 7A:4254435..4254443 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | TGGCAGCGCACCGGGTACCATTTCCAGCCGGAGAAGAACTACATGAACGATCCAAACGCTCCGATGTACTACCGTGGATGGTACCACTTCTTCTACCAGTACAACCCG |
Microexon-tag Amino Acid Seq | WQRTGYHFQPEKNYMNDPNAPMYYRGWYHFFYQYNP |
Microexon-tag spanning region | 4254280-4254709 |
Microexon-tag prediction score | 0.9649 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS7A02G009600.3x |
Reference Transcript ID | TraesCS7A02G009600.3 |
Gene ID | TraesCS7A02G009600 |
Gene Name | NA |
Transcript ID | TraesCS7A02G009600.3 |
Protein ID | |
Gene ID | TraesCS7A02G009600 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.90E-99 |
Motif start | 132 |
Motif end | 445 |
Protein seq | >TraesCS7A02G009600.3 MALSKTQGRPRWKTFLFSFVAAAVGMKLRAGTPPVLYSYASMQQRSGGGVRCRECIAVLGAAALVVLVVTHALLPGARLG DLGDVVSPVLRLRRARREEVPSSEKTVGEIGDEADGFLWSNAMLQWQRTGYHFQPEKNYMNDPNAPMYYRGWYHFFYQYN PKGVTWGNISWGHAVSRDMVHWHHLPLAMVPDRWYDIKGVLTGSATVLPDGKVVLLYTGNTDTLAQVQCLAVPADPHDPL LRTWTKHPANPVLLPPPETGKKDFRDPMTAWFDKSDNTWRTMIGSKDDNGHAGVALMYKTKDFVKFELIPRPVHRVEGTG MWECVDFYPVGNRNSSQEELYVLKASMDDERHDYYALGRYDAVTNTWTPLDPETDVGIGLRYDWGKFFASTTFYDPTKRR RVMWAYVGETDSNRTDLAKGWANVQAIPRTVALDEKTRTNLVQWPVEEIETLRHNTTDLSGITIGTGSVIPLHLCQAAQL DIEASFRLNTSDIASHNEADIGYNCSTSGGASKRGALGPFGLLLTNGRSEQMAMYFYVSRSLDGGLRTHFCHDESQSSLA KNVVKRVVGSTVPVLEGEALSARILVDHSIVESFVMGGRLTATSRVYPTEAIYEAAGVYVFNNATSSRMTVERLVVHEMH STPMQRDLYARD* |
CDS seq | >TraesCS7A02G009600.3 ATGGCGCTCTCTAAAACTCAAGGAAGACCCCGGTGGAAAACTTTCCTCTTCAGTTTTGTAGCGGCGGCCGTCGGGATGAA GTTACGCGCCGGCACGCCGCCCGTCCTGTACTCGTACGCGTCGATGCAGCAGCGGAGCGGCGGCGGTGTGAGGTGTCGCG AGTGCATTGCCGTGCTGGGCGCCGCCGCCTTGGTGGTGCTCGTCGTCACCCACGCGCTCCTCCCGGGGGCCAGGTTGGGG GACCTGGGCGACGTTGTTAGCCCGGTGCTCCGTCTCCGGAGAGCCAGGCGAGAGGAGGTGCCGTCGTCGGAGAAGACGGT AGGGGAAATCGGCGACGAGGCCGATGGGTTCCTGTGGAGCAACGCCATGCTGCAGTGGCAGCGCACCGGGTACCATTTCC AGCCGGAGAAGAACTACATGAACGATCCAAACGCTCCGATGTACTACCGTGGATGGTACCACTTCTTCTACCAGTACAAC CCGAAGGGCGTCACGTGGGGCAACATCTCGTGGGGCCACGCCGTGTCGCGGGACATGGTCCACTGGCACCACCTACCCCT TGCTATGGTGCCCGACCGATGGTACGACATCAAAGGCGTTTTGACGGGCTCCGCCACCGTACTTCCCGATGGCAAAGTCG TCCTGCTCTACACGGGGAACACCGACACCCTTGCCCAGGTACAGTGCCTTGCCGTACCTGCTGACCCTCATGATCCTCTC CTTCGTACTTGGACCAAGCACCCTGCCAACCCTGTGCTCCTTCCGCCCCCCGAGACCGGCAAAAAGGACTTTCGCGACCC CATGACAGCATGGTTTGATAAGTCCGACAACACATGGCGCACCATGATCGGGTCCAAGGATGACAACGGTCATGCTGGCG TCGCCCTCATGTACAAGACAAAAGACTTTGTCAAGTTCGAGCTCATCCCACGCCCGGTCCACCGCGTCGAGGGCACCGGC ATGTGGGAGTGCGTCGACTTCTACCCTGTGGGCAACCGCAACTCATCACAGGAAGAGTTGTATGTGCTGAAGGCGAGCAT GGACGATGAACGACATGACTACTACGCATTGGGAAGGTACGACGCAGTGACCAACACATGGACGCCGCTGGACCCAGAAA CAGATGTGGGAATCGGACTAAGGTACGATTGGGGAAAGTTCTTTGCGTCCACGACATTCTATGATCCGACAAAGCGGCGA CGCGTGATGTGGGCGTATGTTGGTGAGACAGACTCCAACCGGACCGACCTCGCCAAAGGATGGGCAAACGTCCAGGCGAT TCCGAGGACGGTGGCGCTGGACGAGAAGACCCGGACGAACCTCGTCCAATGGCCGGTGGAGGAGATCGAGACCCTCCGCC ACAACACCACTGACCTCAGTGGCATCACCATCGGCACTGGCTCCGTCATCCCCTTGCATCTCTGCCAAGCCGCTCAGCTC GACATAGAGGCCTCCTTCCGCCTCAACACATCTGACATCGCATCCCACAACGAGGCCGACATTGGCTACAACTGCAGCAC TAGTGGTGGTGCCTCCAAGCGGGGTGCACTTGGCCCCTTCGGCCTCCTCCTCACCAACGGCCGTAGTGAGCAAATGGCAA TGTACTTCTACGTGTCTAGAAGCCTCGACGGGGGACTCCGGACCCACTTCTGCCATGACGAGTCACAGTCATCGCTGGCC AAGAACGTTGTGAAGCGTGTGGTGGGCAGCACTGTTCCGGTGCTCGAGGGCGAGGCTTTATCCGCTAGGATTCTTGTGGA TCATTCCATTGTGGAGAGCTTTGTGATGGGTGGGAGGTTGACGGCGACGTCACGGGTTTATCCCACTGAGGCCATCTACG AGGCGGCTGGGGTGTATGTTTTCAACAACGCTACCAGCTCCAGAATGACCGTCGAGAGGCTCGTGGTGCACGAGATGCAC TCAACACCGATGCAACGAGATCTTTATGCACGAGATTAA |
Ta_7A:4254435-4254443:- does not have available information here.