
Microexon ID | Ta_7A:4208307-4208315:- |
Species | Triticum Aestivum | Coordinates | 7A:4208307..4208315 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAATG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | TGGCAGCGCAGCGGTTACCATTTCCAGCCGGATGGGAACTTCATGAACGATCCCAATGCTCCCATGTATTACCGTGGACTGTATCACTTCTTCTACCAGTACAATCCC |
Microexon-tag Amino Acid Seq | WQRSGYHFQPDGNFMNDPNAPMYYRGLYHFFYQYNP |
Microexon-tag spanning region | 4208115-4208590 |
Microexon-tag prediction score | 0.9427 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS7A02G009500.3x |
Reference Transcript ID | TraesCS7A02G009500.3 |
Gene ID | TraesCS7A02G009500 |
Gene Name | NA |
Transcript ID | TraesCS7A02G009500.3 |
Protein ID | |
Gene ID | TraesCS7A02G009500 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.30E-95 |
Motif start | 126 |
Motif end | 440 |
Protein seq | >TraesCS7A02G009500.3 MKSRGASAVPDTPPVMSGHALQQHQRGGGGGGGGTRWRECAAVLGAVAVVVLVVTHALLNVGDNLDDVADPVARLRAATD EKAAVLSKKTPGEAQAEQDIKAAAGADADRFLWSKEMLQWQRSGYHFQPDGNFMNDPNAPMYYRGLYHFFYQYNPKGVVW NKIAWGHAVSSDLVHWRHLPVAMVPDQWYDINGVLTGSATMLPNGTVILLYTGNSDTFAQVQCLAFPADPADPLLRTWTK HPANPVIFPPPGIGDRDFRDPMAAWFDKSDNTWRTIIGSKDDHGHAGIALMYKTKDFIKYELIPDPVHRVEGTGMWECID LYPISGGSDSSEEVIHVMKASVNDEWHDYYALGRFDAEANRWTPLDPEADVGIGMRVDWGKFYASTSFYDPVKQRRVSWG FVGETDSPNTDIAKGWASLQGIPRKVVLDEKTRTNILQWPVEEIDTLRYNTTNFSGITVESSSVITLPLRQVSQLDIEAS FRLNASAIAALNEADVSYNCSTSGGATERGALGPFGLLIHATNSGSEQLAVYFYIYKGLDGGLRTQFCHDESGSSRAKEL LKRVVGSTMPVLHGEALSARVLVDHSIVESFVMGGRMTVTSRVYPMEAIHAAGRVCVFNNATGSAVTVEKLVVHEMASAP IQAYRDA* |
CDS seq | >TraesCS7A02G009500.3 ATGAAGTCACGCGGCGCTAGCGCTGTCCCCGACACGCCGCCGGTCATGTCTGGGCACGCGCTGCAGCAGCACCAGCGGGG CGGCGGCGGCGGCGGCGGCGGCACCAGGTGGCGCGAGTGCGCCGCCGTGCTGGGCGCCGTGGCCGTGGTGGTGCTAGTCG TCACCCATGCGCTCCTCAACGTGGGCGACAATCTCGACGACGTGGCTGACCCGGTAGCCCGTCTCCGGGCAGCCACCGAC GAGAAAGCGGCCGTTCTGTCGAAGAAGACTCCCGGGGAGGCCCAAGCGGAGCAGGACATCAAGGCCGCCGCCGGCGCCGA TGCCGACCGGTTCCTGTGGAGCAAGGAGATGCTGCAGTGGCAGCGCAGCGGTTACCATTTCCAGCCGGATGGGAACTTCA TGAACGATCCCAATGCTCCCATGTATTACCGTGGACTGTATCACTTCTTCTACCAGTACAATCCCAAAGGCGTCGTCTGG AACAAGATCGCCTGGGGCCACGCCGTGTCGTCGGACCTGGTCCACTGGCGCCATCTCCCCGTCGCCATGGTGCCCGACCA ATGGTACGACATCAACGGCGTCTTGACGGGATCCGCCACCATGCTCCCCAATGGCACGGTCATCTTGCTTTACACGGGCA ACAGTGACACCTTTGCCCAGGTTCAGTGCCTCGCCTTCCCTGCAGACCCTGCAGACCCCCTCCTCCGTACCTGGACCAAG CACCCTGCCAACCCCGTCATCTTCCCGCCCCCTGGCATTGGCGACAGGGACTTCCGCGACCCCATGGCCGCATGGTTTGA TAAGTCCGACAACACATGGCGCACCATCATAGGGTCCAAGGATGACCATGGTCATGCCGGTATTGCCCTCATGTACAAGA CGAAAGACTTCATCAAGTACGAGCTCATCCCGGACCCGGTCCACCGTGTCGAGGGCACCGGCATGTGGGAGTGCATCGAC CTCTACCCCATTAGCGGTGGCAGCGACTCATCAGAGGAGGTGATACATGTGATGAAGGCGAGCGTGAACGATGAGTGGCA TGACTACTACGCGTTGGGGAGGTTTGATGCAGAGGCCAACAGGTGGACGCCGTTGGACCCGGAAGCTGATGTGGGTATCG GCATGAGGGTCGATTGGGGTAAGTTTTATGCCTCTACATCCTTCTATGATCCGGTCAAGCAGCGGCGTGTGAGCTGGGGG TTTGTTGGCGAGACCGACTCACCCAACACCGACATAGCCAAGGGATGGGCAAGCCTCCAGGGGATTCCAAGGAAAGTAGT GCTAGACGAGAAAACCCGGACGAACATCCTCCAATGGCCGGTGGAGGAGATCGACACCCTCCGCTACAACACCACCAACT TCAGCGGCATCACCGTCGAGTCTAGCTCTGTCATAACCCTCCCTCTCCGCCAAGTTTCTCAACTCGATATCGAGGCATCC TTTCGCCTCAACGCTTCAGCCATCGCCGCCCTCAACGAGGCCGATGTCAGCTACAACTGTAGTACAAGTGGTGGTGCCAC CGAACGAGGCGCGCTCGGCCCCTTTGGTCTTCTCATCCATGCCACCAACAGCGGCAGCGAACAACTGGCAGTGTACTTCT ACATTTACAAGGGTCTTGATGGGGGCCTCCGGACCCAGTTCTGCCATGATGAGTCAGGGTCATCGCGAGCCAAGGAACTG CTGAAGCGCGTGGTGGGAAGCACCATGCCCGTGCTCCATGGAGAGGCTTTATCCGCAAGGGTGCTTGTGGATCATTCGAT TGTGGAGAGCTTTGTGATGGGTGGGAGGATGACGGTGACATCGCGCGTGTACCCTATGGAGGCCATCCATGCGGCTGGTA GGGTGTGCGTTTTCAACAACGCCACCGGGTCCGCCGTTACCGTCGAGAAGCTCGTGGTGCACGAGATGGCCTCAGCACCA ATACAAGCATACCGTGATGCATGA |
Ta_7A:4208307-4208315:- does not have available information here.