
Microexon ID | Ta_6D:30238756-30238764:- |
Species | Triticum Aestivum | Coordinates | 6D:30238756..30238764 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCATGTG |
Microexon Amino Acid seq | DPCG |
Microexon-tag DNA Seq | AGGTACAGGACTGCCTACCACTTCCAGCCTCCCAGGAACTGGATCAATGATCCATGTGGACTAATGTACTACAAAGGCATCTACCATAATTTCTACCAGTATAACCCC |
Microexon-tag Amino Acid Seq | RYRTAYHFQPPRNWINDPCGLMYYKGIYHNFYQYNP |
Microexon-tag spanning region | 30238622-30248335 |
Microexon-tag prediction score | 0.9472 |
Overlapped with the annotated transcript (%) | 15.13 |
New Transcript ID | TraesCS6D02G064200.1x |
Reference Transcript ID | TraesCS6D02G064200.1 |
Gene ID | TraesCS6D02G064200 |
Gene Name | NA |
Transcript ID | TraesCS6D02G064200.1 |
Protein ID | |
Gene ID | TraesCS6D02G064200 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 8.70E-94 |
Motif start | 77 |
Motif end | 396 |
Protein seq | >TraesCS6D02G064200.1 MALPWAFVLLPALFFLSSSVTNLFFSNSSSNGSGGRCSLCPQSPEVSFCPLSPEVSPCSQSPEVPYIVSTTYRTAYHFQP PRNWINDPCGLMYYKGIYHNFYQYNPHCALWCWGDIAWGHSVSTDLVNWIQLEPVIEPDNPSDIDGCWTGSATILSGGQP VILYTGVSRDNCQVQNLLFPKNPSDPYLREWTKAGNNPVIQPVVPGLNRSCFRDPTTGWIGPDGLWRIAVGAQLYSYNAA LLYKSEDFLSWTRVDHPLYSHNLSNMWECPDFFAVLPGNNSGLDMSVSIPRGAKHALKMSVGYFDKYLIGVYDLKRDAFV PDTIVDDCRLWLRIDYGDFYASKSFFDSKKGRRIIWGWSQEADCRSDDVAKGWAGIHTIPRTIWLDSDGKQLLQWPVDEI ESLRTNEINHQGLELNKGDMFEINGVDTFQADVEIYFELTSINAAEPFNPSWLLDPEKHCCEAGASVHGGIGPFGLVILA SNNMDEHTVVHFRVYKSQQKYMILMCSDLRRSSIRPSRYTPAYGGFFELDLAKERKISLRTLIDRSAVESFGGGGRVCIT SRVYPAVLADVGRAHMYAFNNGSATVRVPQLSAWTMRNAHVNVENGRSAI* |
CDS seq | >TraesCS6D02G064200.1 ATGGCGCTACCTTGGGCCTTCGTCCTTCTCCCTGCTCTCTTCTTCCTCTCCTCCTCTGTAACCAACCTCTTCTTCTCCAA CAGCAGCAGCAATGGGAGTGGAGGGAGATGCTCCCTCTGTCCACAGTCTCCAGAGGTCTCCTTCTGTCCACTGTCTCCAG AGGTCTCCCCCTGTTCACAGTCTCCAGAGGTCCCCTATATTGTCAGCACGACGTATAGGACTGCCTACCACTTCCAGCCT CCCAGGAACTGGATCAATGATCCATGTGGACTAATGTACTACAAAGGCATCTACCATAATTTCTACCAGTATAACCCCCA CTGCGCCCTCTGGTGTTGGGGTGACATAGCTTGGGGCCATTCAGTTTCGACAGACCTCGTCAACTGGATCCAGCTTGAAC CCGTGATAGAACCGGATAATCCGAGTGACATAGATGGCTGCTGGACCGGTTCAGCCACAATTCTGTCTGGTGGTCAACCG GTCATCCTATACACCGGTGTCAGCAGAGACAACTGTCAGGTCCAAAACCTTTTGTTTCCCAAGAATCCGTCTGACCCGTA CCTGCGAGAATGGACGAAAGCAGGCAATAACCCAGTGATCCAACCGGTAGTACCGGGTTTGAACAGAAGCTGCTTCAGGG ATCCGACGACCGGTTGGATCGGACCAGATGGACTATGGAGGATAGCAGTTGGTGCTCAGCTGTACAGCTACAACGCTGCA CTTTTGTACAAGAGTGAAGACTTTCTGAGTTGGACAAGAGTTGATCACCCACTGTATTCTCATAATTTGTCCAATATGTG GGAGTGCCCGGATTTCTTTGCGGTATTGCCGGGCAATAACAGTGGACTGGACATGTCCGTATCAATCCCAAGAGGCGCCA AGCATGCCCTCAAAATGAGCGTGGGTTACTTTGACAAGTACTTGATTGGGGTTTATGATCTCAAACGTGATGCCTTTGTG CCAGATACTATCGTAGATGACTGTCGGCTGTGGCTGAGGATCGATTATGGCGATTTCTATGCTTCAAAGTCATTCTTTGA CTCGAAAAAGGGCAGGAGGATCATATGGGGTTGGTCTCAGGAGGCAGATTGTCGCTCAGATGATGTTGCAAAAGGTTGGG CAGGAATCCATACAATCCCCAGGACGATTTGGTTAGATAGTGATGGCAAGCAGTTGTTGCAATGGCCAGTTGATGAGATT GAGTCCCTTCGAACAAATGAAATCAACCATCAAGGACTAGAGCTCAACAAGGGAGATATGTTTGAGATCAATGGAGTTGA TACTTTTCAGGCTGATGTGGAGATATATTTTGAGCTGACGTCCATCAATGCCGCCGAACCTTTTAATCCTTCCTGGCTTT TGGACCCTGAGAAGCATTGCTGTGAAGCCGGTGCATCGGTTCATGGTGGTATAGGGCCATTTGGACTTGTTATTCTGGCC TCCAACAACATGGATGAGCACACTGTCGTGCACTTCAGAGTCTACAAGTCACAGCAAAAGTACATGATACTCATGTGCTC TGATTTAAGAAGGTCTTCCATCAGACCATCACGGTACACACCAGCCTATGGAGGCTTCTTTGAACTTGATCTTGCAAAGG AGAGGAAGATATCTCTCAGAACTCTGATTGATCGGTCGGCGGTGGAGAGCTTCGGTGGTGGTGGTAGGGTTTGCATCACG TCCAGAGTTTATCCAGCGGTGCTCGCCGATGTTGGCAGGGCCCACATGTATGCCTTCAACAATGGAAGTGCCACGGTGAG GGTGCCACAGCTCAGCGCATGGACCATGAGGAACGCACATGTGAATGTGGAGAATGGTAGGAGTGCTATTTAA |
Ta_6D:30238756-30238764:- does not have available information here.