Microexon ID Ta_6D:30238756-30238764:-
Species Triticum   Aestivum
Coordinates 6D:30238756..30238764
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCATGTG
Microexon Amino Acid seq DPCG
Microexon-tag DNA Seq AGGTACAGGACTGCCTACCACTTCCAGCCTCCCAGGAACTGGATCAATGATCCATGTGGACTAATGTACTACAAAGGCATCTACCATAATTTCTACCAGTATAACCCC
Microexon-tag Amino Acid Seq RYRTAYHFQPPRNWINDPCGLMYYKGIYHNFYQYNP
Microexon-tag spanning region30238622-30248335
Microexon-tag prediction score0.9472
Overlapped with the annotated transcript (%) 15.13
New Transcript ID TraesCS6D02G064200.1x
Reference Transcript ID TraesCS6D02G064200.1
Gene ID TraesCS6D02G064200
Gene Name NA
Transcript ID TraesCS6D02G064200.1
Protein ID
Gene ID TraesCS6D02G064200
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 8.70E-94
Motif start 77
Motif end 396
Protein seq >TraesCS6D02G064200.1
MALPWAFVLLPALFFLSSSVTNLFFSNSSSNGSGGRCSLCPQSPEVSFCPLSPEVSPCSQSPEVPYIVSTTYRTAYHFQP
PRNWINDPCGLMYYKGIYHNFYQYNPHCALWCWGDIAWGHSVSTDLVNWIQLEPVIEPDNPSDIDGCWTGSATILSGGQP
VILYTGVSRDNCQVQNLLFPKNPSDPYLREWTKAGNNPVIQPVVPGLNRSCFRDPTTGWIGPDGLWRIAVGAQLYSYNAA
LLYKSEDFLSWTRVDHPLYSHNLSNMWECPDFFAVLPGNNSGLDMSVSIPRGAKHALKMSVGYFDKYLIGVYDLKRDAFV
PDTIVDDCRLWLRIDYGDFYASKSFFDSKKGRRIIWGWSQEADCRSDDVAKGWAGIHTIPRTIWLDSDGKQLLQWPVDEI
ESLRTNEINHQGLELNKGDMFEINGVDTFQADVEIYFELTSINAAEPFNPSWLLDPEKHCCEAGASVHGGIGPFGLVILA
SNNMDEHTVVHFRVYKSQQKYMILMCSDLRRSSIRPSRYTPAYGGFFELDLAKERKISLRTLIDRSAVESFGGGGRVCIT
SRVYPAVLADVGRAHMYAFNNGSATVRVPQLSAWTMRNAHVNVENGRSAI*
CDS seq >TraesCS6D02G064200.1
ATGGCGCTACCTTGGGCCTTCGTCCTTCTCCCTGCTCTCTTCTTCCTCTCCTCCTCTGTAACCAACCTCTTCTTCTCCAA
CAGCAGCAGCAATGGGAGTGGAGGGAGATGCTCCCTCTGTCCACAGTCTCCAGAGGTCTCCTTCTGTCCACTGTCTCCAG
AGGTCTCCCCCTGTTCACAGTCTCCAGAGGTCCCCTATATTGTCAGCACGACGTATAGGACTGCCTACCACTTCCAGCCT
CCCAGGAACTGGATCAATGATCCATGTGGACTAATGTACTACAAAGGCATCTACCATAATTTCTACCAGTATAACCCCCA
CTGCGCCCTCTGGTGTTGGGGTGACATAGCTTGGGGCCATTCAGTTTCGACAGACCTCGTCAACTGGATCCAGCTTGAAC
CCGTGATAGAACCGGATAATCCGAGTGACATAGATGGCTGCTGGACCGGTTCAGCCACAATTCTGTCTGGTGGTCAACCG
GTCATCCTATACACCGGTGTCAGCAGAGACAACTGTCAGGTCCAAAACCTTTTGTTTCCCAAGAATCCGTCTGACCCGTA
CCTGCGAGAATGGACGAAAGCAGGCAATAACCCAGTGATCCAACCGGTAGTACCGGGTTTGAACAGAAGCTGCTTCAGGG
ATCCGACGACCGGTTGGATCGGACCAGATGGACTATGGAGGATAGCAGTTGGTGCTCAGCTGTACAGCTACAACGCTGCA
CTTTTGTACAAGAGTGAAGACTTTCTGAGTTGGACAAGAGTTGATCACCCACTGTATTCTCATAATTTGTCCAATATGTG
GGAGTGCCCGGATTTCTTTGCGGTATTGCCGGGCAATAACAGTGGACTGGACATGTCCGTATCAATCCCAAGAGGCGCCA
AGCATGCCCTCAAAATGAGCGTGGGTTACTTTGACAAGTACTTGATTGGGGTTTATGATCTCAAACGTGATGCCTTTGTG
CCAGATACTATCGTAGATGACTGTCGGCTGTGGCTGAGGATCGATTATGGCGATTTCTATGCTTCAAAGTCATTCTTTGA
CTCGAAAAAGGGCAGGAGGATCATATGGGGTTGGTCTCAGGAGGCAGATTGTCGCTCAGATGATGTTGCAAAAGGTTGGG
CAGGAATCCATACAATCCCCAGGACGATTTGGTTAGATAGTGATGGCAAGCAGTTGTTGCAATGGCCAGTTGATGAGATT
GAGTCCCTTCGAACAAATGAAATCAACCATCAAGGACTAGAGCTCAACAAGGGAGATATGTTTGAGATCAATGGAGTTGA
TACTTTTCAGGCTGATGTGGAGATATATTTTGAGCTGACGTCCATCAATGCCGCCGAACCTTTTAATCCTTCCTGGCTTT
TGGACCCTGAGAAGCATTGCTGTGAAGCCGGTGCATCGGTTCATGGTGGTATAGGGCCATTTGGACTTGTTATTCTGGCC
TCCAACAACATGGATGAGCACACTGTCGTGCACTTCAGAGTCTACAAGTCACAGCAAAAGTACATGATACTCATGTGCTC
TGATTTAAGAAGGTCTTCCATCAGACCATCACGGTACACACCAGCCTATGGAGGCTTCTTTGAACTTGATCTTGCAAAGG
AGAGGAAGATATCTCTCAGAACTCTGATTGATCGGTCGGCGGTGGAGAGCTTCGGTGGTGGTGGTAGGGTTTGCATCACG
TCCAGAGTTTATCCAGCGGTGCTCGCCGATGTTGGCAGGGCCCACATGTATGCCTTCAACAATGGAAGTGCCACGGTGAG
GGTGCCACAGCTCAGCGCATGGACCATGAGGAACGCACATGTGAATGTGGAGAATGGTAGGAGTGCTATTTAA
Ta_6D:30238756-30238764:- does not have available information here.