
Microexon ID | Ta_6B:57285425-57285433:+ |
Species | Triticum Aestivum | Coordinates | 6B:57285425..57285433 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCATCTG |
Microexon Amino Acid seq | DPSG |
Microexon-tag DNA Seq | ATGTACAAGACCGCCTTCCACTTCCAGCCCGCCAAGAACTGGATGAACGATCCATCTGGACCAATGTACTTCAATGGCATCTACCATGAATTCTACCAGTATAACCTC |
Microexon-tag Amino Acid Seq | MYKTAFHFQPAKNWMNDPSGPMYFNGIYHEFYQYNL |
Microexon-tag spanning region | 57283897-57285574 |
Microexon-tag prediction score | 0.937 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS6B02G080700.2x |
Reference Transcript ID | TraesCS6B02G080700.2 |
Gene ID | TraesCS6B02G080700 |
Gene Name | NA |
Transcript ID | TraesCS6B02G080700.2 |
Protein ID | |
Gene ID | TraesCS6B02G080700 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 7.20E-96 |
Motif start | 65 |
Motif end | 382 |
Protein seq | >TraesCS6B02G080700.2 MAQAWAFLLPVLVLGSYVTSLFLPTYITGPLCGGDGGGRSLFLCAQAPKDQDPSPASTMYKTAFHFQPAKNWMNDPSGPM YFNGIYHEFYQYNLNGPIFGDIVWGHSVSTDLVNWIGLEPALVRDTPSDIDGCWTGSVTILPGGKPIIIYTGGDIDQNQA QNIAFPKNRSDPYLREWIKADNNPVLRPDEPGMNSIEFRDPTTGWIGPDGLWRMAVGGELNGYSAALLYKSEDFLNWTKV DHPLYSHNGSNMWECPDFFAVLPGNNAGLDLSAAIPQGAKHALKMSVDSVDKYMIGVYDLHRDAFVPDNVVDDRRLWLRI DYGTFYASKSFFDSNKNRRIIWGWSRETDSPSDDLAKGWAGLHTIPRTIWLAGDGKQLLQWPVEEIESLRTNEINHQGLE LNKGDLFEIKEVDAFQADVEIGFELASIDDADPFDPSWLLDPEKHCGEAGASVPGGIGPFGLVILASDNMDEHTEVYFRV YKSQEKYMVLMCSDLRRSSLRPDLEKPAYGGFFEFDLEKERKISLRTLIDRSAVESFGGGGRVCITSRVYPAVLADVGSA HIYAFNNGSATVRVPQLSAWTMRKAQVNVEKGWSAI* |
CDS seq | >TraesCS6B02G080700.2 ATGGCCCAAGCTTGGGCCTTCCTCCTCCCGGTCCTCGTCCTCGGCTCCTACGTAACCAGCCTCTTCCTCCCCACCTATAT AACCGGCCCCCTCTGCGGCGGCGATGGAGGAGGCAGATCCTTGTTCCTCTGCGCGCAGGCTCCCAAGGACCAGGACCCGT CTCCTGCCAGCACCATGTACAAGACCGCCTTCCACTTCCAGCCCGCCAAGAACTGGATGAACGATCCATCTGGACCAATG TACTTCAATGGCATCTACCATGAATTCTACCAGTATAACCTCAACGGCCCCATTTTTGGTGACATAGTTTGGGGCCATTC GGTTTCAACAGACCTTGTCAACTGGATCGGGCTTGAACCCGCGTTAGTGCGGGACACCCCTAGTGACATAGACGGCTGCT GGACCGGCTCAGTCACCATTCTGCCTGGTGGTAAACCGATCATCATATACACTGGTGGTGACATAGATCAAAATCAGGCA CAAAACATCGCGTTTCCGAAAAACCGGTCTGACCCATACCTGAGGGAATGGATCAAAGCAGACAATAACCCGGTGCTCCG ACCGGACGAACCAGGGATGAACTCGATCGAGTTCAGGGATCCGACAACCGGTTGGATCGGACCGGATGGACTGTGGAGGA TGGCAGTTGGTGGTGAGCTGAACGGCTACAGTGCTGCGCTTTTGTACAAGAGTGAAGACTTTCTGAATTGGACAAAAGTT GATCACCCACTGTATTCACATAATGGATCCAATATGTGGGAGTGTCCGGATTTCTTTGCGGTATTGCCGGGCAATAACGC TGGACTGGACCTGTCCGCAGCGATCCCACAAGGCGCCAAGCATGCCCTCAAAATGAGCGTGGATTCAGTTGACAAGTACA TGATCGGGGTGTATGATCTCCATCGTGATGCCTTTGTGCCAGATAATGTCGTAGATGACCGTCGGCTGTGGCTGAGAATA GATTACGGCACTTTCTATGCTTCAAAATCATTCTTTGACTCGAACAAGAACAGGAGGATCATATGGGGTTGGTCTAGGGA GACAGATAGTCCTTCAGATGATCTTGCAAAAGGTTGGGCAGGACTCCATACAATCCCCAGGACAATTTGGTTAGCCGGCG ATGGCAAGCAGTTGTTACAATGGCCAGTTGAGGAGATTGAGTCCCTTCGAACAAATGAAATCAACCATCAAGGACTAGAG CTCAACAAGGGAGATCTATTTGAGATCAAGGAAGTTGACGCTTTTCAGGCTGATGTAGAGATAGGTTTTGAGCTGGCGTC CATCGATGACGCCGATCCTTTTGATCCTTCCTGGCTTTTGGACCCTGAGAAGCATTGTGGGGAAGCGGGTGCATCAGTTC CTGGTGGTATAGGTCCATTTGGACTTGTCATTCTGGCCTCCGACAACATGGACGAGCACACTGAGGTGTATTTCAGAGTC TACAAGTCACAGGAAAAGTACATGGTACTCATGTGCTCTGATCTAAGAAGGTCTTCCCTGAGACCAGATCTGGAGAAACC AGCCTATGGAGGCTTCTTTGAATTTGATCTTGAAAAGGAAAGGAAGATATCACTCAGAACTCTGATTGACCGGTCGGCGG TGGAGAGCTTCGGTGGCGGTGGCAGGGTTTGCATCACATCCAGAGTTTATCCGGCGGTGCTGGCCGACGTCGGCAGTGCC CACATTTACGCTTTCAACAATGGAAGTGCCACGGTCAGGGTGCCACAGCTCAGCGCATGGACCATGAGGAAGGCACAAGT GAATGTGGAGAAGGGTTGGAGTGCTATTTAA |
Ta_6B:57285425-57285433:+ does not have available information here.