
Microexon ID | Ta_6A:32668881-32668889:+ |
Species | Triticum Aestivum | Coordinates | 6A:32668881..32668889 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCATGTG |
Microexon Amino Acid seq | DPCG |
Microexon-tag DNA Seq | AGGTACAGGACTGCCTACCACTTCCAGCCTCCCATGAATTGGATCAATGATCCATGTGGACTAATGTACTACAAAGGCATCTACCATAATTTCTACCAGTATAACCCC |
Microexon-tag Amino Acid Seq | RYRTAYHFQPPMNWINDPCGLMYYKGIYHNFYQYNP |
Microexon-tag spanning region | 32668135-32669026 |
Microexon-tag prediction score | 0.9442 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS6A02G060800.1x |
Reference Transcript ID | TraesCS6A02G060800.1 |
Gene ID | TraesCS6A02G060800 |
Gene Name | NA |
Transcript ID | TraesCS6A02G060800.1 |
Protein ID | |
Gene ID | TraesCS6A02G060800 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 7.30E-92 |
Motif start | 68 |
Motif end | 387 |
Protein seq | >TraesCS6A02G060800.1 MALPWAFVLLPALFFLSSSVSNLFFSNSSSNGSGGRCSLCPQSPEVSFCPLSPEVPYIVSTRYRTAYHFQPPMNWINDPC GLMYYKGIYHNFYQYNPHCALWCWGDIAWGHSVSTDLVNWIQLEPVIEPDNPSDIDGCWTGSATILSGGQPVILYTGVSI DNCQVQNLLLPRNLSDPYLREWTKAGNNPVIQPVVPGLNRSCFRDPTTGWIGPDGLWRIAVGAQLYSYTAALLYKSEDFL SWTRVDHPLYSHNLSNMWECPDFFAVLPGYNSGLDMSVAIPRGAKHALKMSVGYFDKYLIGVYDLKRDAFVPDTIVDDCR LWLRIDYGNFYASKSFFDSKKGRRIIWGWSQEADCRSDDVAKGWAGIHTIPRTIWLDGNGKQLLQWPVDEIESLRTNEIN HQGLELNKGDLFEINGVDTFQADVEIYFELTSIDAAEPFDPSWLLDPEKHCCEAGASVHGGIGPFGLVILASNNMDEHTV VHFRVYKSQRKYMILMCSDLRRSSIRPSPYTPAYGGFFELDLAKERNISLRTLIDRSAVESFGGGGRVCITSRVYPAVLA GVGKAHMYAFNNGSATVRVPQLSAWTMRNAHVNVENGWSAI* |
CDS seq | >TraesCS6A02G060800.1 ATGGCGCTACCTTGGGCCTTCGTCCTCCTCCCTGCCCTCTTCTTCCTCTCCTCCTCTGTATCCAACCTCTTCTTCTCCAA CAGCAGCAGCAATGGGAGTGGAGGGAGATGTTCCCTCTGCCCACAGTCTCCAGAGGTCTCCTTCTGTCCACTGTCTCCAG AGGTCCCCTATATTGTCAGCACGAGGTACAGGACTGCCTACCACTTCCAGCCTCCCATGAATTGGATCAATGATCCATGT GGACTAATGTACTACAAAGGCATCTACCATAATTTCTACCAGTATAACCCCCACTGCGCCCTCTGGTGTTGGGGTGACAT AGCTTGGGGCCATTCGGTTTCGACAGACCTTGTCAACTGGATCCAGCTTGAACCCGTGATAGAACCGGATAACCCGAGTG ACATAGATGGCTGCTGGACCGGTTCAGCCACAATTTTGTCTGGTGGTCAACCGGTCATCCTATACACCGGTGTCAGCATA GACAACTGTCAGGTCCAAAACCTTTTGCTTCCCAGGAACCTGTCTGACCCGTACCTGAGAGAATGGACCAAAGCAGGCAA TAACCCAGTGATCCAACCGGTAGTACCGGGTTTGAACAGAAGCTGCTTCAGGGATCCGACAACCGGTTGGATCGGACCAG ATGGACTGTGGAGGATAGCAGTTGGTGCTCAGCTGTACAGCTACACCGCTGCACTTTTGTACAAGAGTGAAGACTTTCTG AGTTGGACAAGAGTTGATCACCCACTGTATTCTCATAATTTGTCCAATATGTGGGAGTGCCCGGATTTCTTTGCGGTATT GCCAGGCTATAACAGTGGACTGGACATGTCCGTAGCGATCCCAAGAGGCGCCAAGCATGCCCTCAAAATGAGCGTGGGTT ACTTTGACAAGTACTTGATTGGGGTTTATGATCTCAAACGTGATGCCTTTGTGCCTGATACTATCGTAGATGACTGTCGG CTGTGGCTGAGGATTGATTATGGCAATTTCTATGCTTCAAAGTCATTCTTTGACTCGAAAAAGGGCAGGAGGATCATATG GGGTTGGTCTCAGGAGGCAGATTGTCGTTCAGATGATGTTGCAAAAGGTTGGGCAGGAATCCATACAATCCCCAGGACGA TTTGGTTAGACGGCAATGGCAAGCAGTTGCTGCAATGGCCAGTTGATGAGATTGAGTCCCTTCGAACAAATGAAATCAAC CATCAAGGACTTGAGCTCAACAAGGGAGATTTGTTTGAGATCAATGGAGTTGACACTTTTCAGGCTGATGTGGAGATATA TTTTGAGTTGACGTCCATCGATGCCGCCGAACCTTTTGATCCTTCCTGGCTTTTGGACCCAGAGAAGCATTGTTGTGAAG CCGGTGCATCGGTTCATGGTGGTATAGGGCCATTTGGACTTGTTATTCTGGCCTCAAACAACATGGATGAGCACACTGTC GTGCACTTCAGAGTCTACAAATCACAGCGAAAGTACATGATACTCATGTGCTCTGATCTAAGAAGGTCTTCCATCAGACC ATCACCGTACACACCAGCCTATGGAGGCTTCTTTGAACTTGATCTTGCAAAGGAGAGGAATATATCTCTTAGAACTCTGA TTGATCGGTCGGCGGTGGAGAGCTTCGGTGGTGGTGGTAGGGTTTGCATCACGTCCAGAGTTTATCCAGCGGTGCTCGCT GGTGTCGGCAAGGCCCACATGTATGCCTTCAACAATGGAAGTGCCACGGTCAGGGTGCCACAGCTCAGCGCATGGACCAT GAGGAACGCACATGTGAATGTGGAGAATGGTTGGAGTGCTATTTAA |
Ta_6A:32668881-32668889:+ does not have available information here.