
Microexon ID | Ta_5B:705258458-705258466:+ |
Species | Triticum Aestivum | Coordinates | 5B:705258458..705258466 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCATGTG |
Microexon Amino Acid seq | DPCG |
Microexon-tag DNA Seq | AGGTACAGGACTGCCTACCACTTCCAACCTCCAAGGAACTGGATGAACGATCCATGTGGACCAATGTATTACAATGGCGTCTACCATGAATTCTACCAGTATAACCCC |
Microexon-tag Amino Acid Seq | RYRTAYHFQPPRNWMNDPCGPMYYNGVYHEFYQYNP |
Microexon-tag spanning region | 705256917-705258610 |
Microexon-tag prediction score | 0.9548 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5B02G557300.1x |
Reference Transcript ID | TraesCS5B02G557300.1 |
Gene ID | TraesCS5B02G557300 |
Gene Name | NA |
Transcript ID | TraesCS5B02G557300.1 |
Protein ID | |
Gene ID | TraesCS5B02G557300 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.50E-93 |
Motif start | 62 |
Motif end | 385 |
Protein seq | >TraesCS5B02G557300.1 MMMLMCALLTVLARLACVFSTAILLQSLAWPCSNGERGFSFSYPQSPKVPSIVSERYRTAYHFQPPRNWMNDPCGPMYYN GVYHEFYQYNPDGAFDPNDSLMNMVWGHSVSTDLINWIGLEPAIEPDTPSDICGCWTGSATILFGEQPVIIYTGLIDRKA NQVQNIALPKNRSDPYLREWAKVGNNPVIQHVIPGLNSSHFRDPTTGWIGPDGLWRIAVGAEVNGIGTALLYKSKDFMNW TRIARPLYSNNALNMWECLDFFAVLPGSNNGLDMSSQIPSGAKHVLKVSINSCDMYIVGVYDLKRDEFVPDTVQDDNRLW TRIDYGTFYASKSFFDSKHGRRVIWAWSNETDSYSDDIAKGWAGIHSIPRTIWLDGDGKQLIQWPVEEIESLRINEINHQ GLELKKGDLFEIKGIDTLQADVEIDFEPTSIDDAEPFDPSWLFDPRKHCREADASAHGGIGPFGLVILASDNMEEHTAVH FRVYKSQEKYMILMCSDLRRSSLRPGLYTPAYGGFFEFDLENERKISLRTLIDRSAVESFGSGGRICITARVYPVALVDD GTTHMYAFNNGSTTVRVPQLRAWSMKRAQVNVMKGGNVIDA* |
CDS seq | >TraesCS5B02G557300.1 ATGATGATGCTGATGTGTGCTCTGCTCACAGTGCTCGCTCGACTTGCCTGTGTGTTCTCCACGGCCATTCTTTTGCAGAG CCTGGCATGGCCCTGCAGCAATGGAGAGAGAGGCTTCTCCTTCTCCTACCCCCAGTCTCCAAAGGTCCCCTCCATTGTCA GCGAGAGGTACAGGACTGCCTACCACTTCCAACCTCCAAGGAACTGGATGAACGATCCATGTGGACCAATGTATTACAAT GGCGTCTACCATGAATTCTACCAGTATAACCCCGATGGCGCCTTTGACCCCAATGACTCCCTCATGAACATGGTTTGGGG CCATTCGGTTTCAACAGACCTCATCAACTGGATCGGTCTTGAACCGGCAATAGAACCGGATACCCCGAGTGACATATGCG GATGTTGGACCGGCTCAGCCACAATTCTATTTGGTGAACAACCGGTCATCATATACACTGGTCTCATCGATAGGAAGGCG AATCAGGTCCAAAACATTGCGCTTCCCAAAAACCGTTCTGATCCGTACCTGAGGGAATGGGCCAAAGTAGGCAATAACCC AGTGATCCAACATGTCATACCAGGCTTGAACTCGAGCCATTTCAGGGATCCGACAACCGGTTGGATTGGACCGGATGGAC TATGGAGAATAGCAGTTGGTGCTGAGGTGAACGGCATCGGTACTGCACTTTTGTACAAGAGTAAAGACTTTATGAATTGG ACTAGAATTGCACGCCCGTTGTATTCAAACAATGCCCTCAATATGTGGGAGTGCCTGGATTTCTTCGCGGTGTTGCCGGG AAGTAACAATGGACTGGACATGTCTTCGCAAATTCCAAGTGGCGCCAAGCATGTCCTCAAAGTGAGCATCAATTCCTGTG ACATGTACATAGTTGGGGTGTATGATCTCAAACGTGATGAGTTTGTGCCAGACACCGTCCAAGATGACAATCGGCTGTGG ACGAGGATCGATTATGGTACTTTCTATGCTTCAAAATCATTCTTTGACTCCAAACATGGCAGGAGAGTCATATGGGCTTG GAGTAACGAGACAGATAGTTATTCAGATGATATTGCAAAAGGCTGGGCAGGAATCCATTCAATCCCCAGGACAATTTGGT TAGACGGCGATGGCAAGCAGTTGATCCAATGGCCAGTTGAAGAGATTGAGTCCCTTCGAATAAATGAAATCAACCATCAA GGACTAGAGCTGAAAAAGGGAGATCTATTTGAGATTAAGGGAATCGACACTTTGCAGGCTGACGTTGAGATAGATTTTGA GCCGACGTCCATCGATGACGCCGAACCTTTTGATCCTTCCTGGCTTTTCGACCCCCGGAAGCATTGCCGGGAGGCGGATG CATCGGCTCATGGTGGCATAGGGCCATTTGGACTTGTTATTCTGGCGTCCGACAACATGGAGGAGCACACTGCAGTGCAC TTCAGGGTTTACAAATCACAGGAAAAGTACATGATCCTCATGTGCTCTGATCTAAGAAGGTCTTCCCTGAGACCAGGACT GTATACACCAGCCTATGGAGGCTTCTTTGAATTTGACCTTGAAAATGAAAGAAAGATATCCCTCAGGACTCTGATCGATC GGTCCGCGGTGGAGAGCTTCGGCAGCGGTGGCAGGATCTGCATCACGGCCAGAGTTTACCCGGTGGCACTTGTCGACGAC GGCACCACCCACATGTATGCATTCAACAATGGAAGTACCACGGTCAGAGTGCCACAGCTAAGGGCATGGAGCATGAAGAG AGCACAGGTGAATGTGATGAAGGGTGGAAATGTGATCGATGCTTAG |
Ta_5B:705258458-705258466:+ does not have available information here.