
Microexon ID | Ta_5B:705137689-705137697:+ |
Species | Triticum Aestivum | Coordinates | 5B:705137689..705137697 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCATGTG |
Microexon Amino Acid seq | DPCG |
Microexon-tag DNA Seq | AAGGACAGGACTGCCTACCATTTCCAGCCTCCCAAAAACTGGATCAACGATCCATGTGGACCAATGTACTACAATGGCATCTACCATGAATTCTACCAATATAACCCC |
Microexon-tag Amino Acid Seq | KDRTAYHFQPPKNWINDPCGPMYYNGIYHEFYQYNP |
Microexon-tag spanning region | 705136835-705137837 |
Microexon-tag prediction score | 0.9526 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5B02G557100.1x |
Reference Transcript ID | TraesCS5B02G557100.1 |
Gene ID | TraesCS5B02G557100 |
Gene Name | NA |
Transcript ID | TraesCS5B02G557100.1 |
Protein ID | |
Gene ID | TraesCS5B02G557100 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 2.70E-95 |
Motif start | 104 |
Motif end | 425 |
Protein seq | >TraesCS5B02G557100.1 MAMAVQGEGFSPPGSTFFSCKLPSVFDTGLYIGSSALLLPPAGCCSCLMSVFTAWLGGLACIFSTTLLFQILVRPCSNGG GLFFCSQSPNAPSILSSKDRTAYHFQPPKNWINDPCGPMYYNGIYHEFYQYNPDGSFNPNTSLNIVWGHSVSTDLVNWIT LEPALEPDTPNDIKGCWSGSATIVSGDQPVIIYTGVIDIEKHQVQNIALPKNRSDPYLREWTKASNNPVIQSGVPGLNSG QFRDPTTGWIGPDGLWRIAVGAQLNGYGAALLYKSEDFLNWTRVDHPLYSSNASIMFECLDFFAVLPGSNNGLDMSSAIP NGAKHVLKMGMNFGEDVYVIGVYDLKRDVFVPDTDDSRLWPRIDYGNFYASKTFFDSKHGRRIIWAWTTETDSSSDDVAK GWAGIHSFPRTIWLDNDGKRLLQWPVEEIESLRRNEINHQKLELKKGDLFEIKGIDTLQADVEIDFELTSIDDADPFDPS WLFDTEKHCQEADASVHGAIGPFGLVILASDNMEEHTVVHFRVYKSQKNYMILMCSDLRRSSLTPGLDTPAYGGFFELDL EKERKISLRTLIDRSAVESFGGGGRVCIMARVYPVSLVDDDHQPHMYAFNNGSATVRVPHLRAWSMRTAQVSV* |
CDS seq | >TraesCS5B02G557100.1 ATGGCGATGGCCGTGCAAGGTGAGGGCTTCTCCCCTCCCGGCTCTACTTTCTTCTCCTGCAAACTGCCAAGTGTTTTTGA CACGGGCTTATATATTGGATCCTCTGCTCTGCTGCTGCCGCCGGCTGGATGCTGCTCTTGCTTGATGTCTGTCTTCACAG CCTGGCTTGGTGGCCTTGCGTGTATCTTCTCCACCACCCTTCTCTTCCAAATCCTGGTACGGCCCTGCAGCAATGGAGGA GGACTCTTCTTCTGCTCACAGTCTCCAAATGCCCCCTCCATCCTCAGCAGCAAGGACAGGACTGCCTACCATTTCCAGCC TCCCAAAAACTGGATCAACGATCCATGTGGACCAATGTACTACAATGGCATCTACCATGAATTCTACCAATATAACCCCG ATGGCTCCTTCAATCCCAATACCTCACTCAACATAGTTTGGGGCCATTCGGTCTCAACAGACCTCGTCAACTGGATCACT CTTGAACCCGCATTAGAACCGGATACCCCAAATGACATAAAAGGTTGCTGGTCCGGCTCAGCCACAATTGTATCTGGTGA TCAACCCGTCATCATATACACTGGTGTCATCGACATAGAGAAGCATCAGGTCCAAAACATTGCGCTTCCCAAAAACCGGT CTGATCCGTACCTAAGGGAATGGACCAAAGCAAGCAATAACCCAGTGATCCAATCGGGTGTACCAGGCTTGAACTCGGGG CAGTTCAGGGATCCGACAACCGGTTGGATCGGACCGGACGGACTATGGAGAATAGCAGTCGGTGCTCAGCTGAACGGCTA CGGTGCTGCACTTTTGTACAAGAGCGAAGACTTCTTGAACTGGACTAGAGTTGACCATCCGCTGTATTCATCCAATGCCT CCATTATGTTTGAGTGCCTGGATTTCTTCGCGGTATTGCCGGGAAGTAACAATGGACTAGACATGTCTTCAGCAATCCCA AATGGCGCCAAGCATGTCCTCAAAATGGGCATGAATTTTGGTGAAGACGTGTATGTGATAGGGGTTTATGATCTCAAACG TGATGTCTTTGTGCCAGATACTGATGACAGTCGGCTATGGCCGAGGATCGATTATGGTAATTTCTATGCTTCAAAAACGT TCTTTGACTCTAAACATGGAAGGAGGATCATATGGGCTTGGACTACCGAGACTGATAGTTCTTCAGATGATGTTGCAAAA GGCTGGGCAGGAATCCATTCATTCCCCAGGACAATTTGGTTAGACAACGATGGTAAGCGGTTGCTGCAATGGCCAGTTGA AGAGATTGAATCCCTTCGAAGAAATGAAATCAACCATCAAAAACTAGAGCTGAAGAAGGGGGATCTATTTGAGATTAAGG GAATTGACACTTTGCAGGCTGATGTCGAGATTGATTTCGAGCTGACGTCAATTGATGACGCCGACCCTTTTGATCCTTCC TGGCTTTTTGACACCGAGAAACATTGCCAGGAAGCGGATGCATCGGTTCATGGTGCCATAGGGCCATTTGGACTTGTTAT TCTGGCCTCCGACAACATGGAGGAGCACACTGTTGTGCACTTCAGAGTTTACAAATCACAGAAAAATTATATGATCCTCA TGTGCTCTGATCTAAGAAGGTCTTCCCTGACACCAGGACTGGACACACCGGCCTATGGAGGCTTCTTTGAATTAGACCTT GAAAAGGAAAGGAAGATCTCCCTCAGAACTCTGATTGATCGGTCTGCGGTGGAGAGCTTCGGTGGCGGTGGCAGGGTCTG CATCATGGCTAGAGTTTACCCAGTGTCACTTGTCGACGACGACCACCAGCCCCACATGTATGCCTTTAACAATGGCAGTG CAACTGTCAGAGTGCCTCATCTCAGGGCTTGGAGCATGAGGACAGCACAAGTGAGCGTTTAA |
Ta_5B:705137689-705137697:+ does not have available information here.