Microexon ID Ta_5B:705055459-705055467:-
Species Triticum   Aestivum
Coordinates 5B:705055459..705055467
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCAAATG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq GAGCTGCGCACCGGGTACCACTTCCAGCCCCCCAAGCATTGGATCAATGATCCAAATGGGCCGATGTACTACAAGGGGCTGTACCATCTCTTCTACCAGTACAACCCA
Microexon-tag Amino Acid Seq ELRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNP
Microexon-tag spanning region705055270-705055667
Microexon-tag prediction score0.9681
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5B02G556600.1x
Reference Transcript ID TraesCS5B02G556600.1
Gene ID TraesCS5B02G556600
Gene Name NA
Transcript ID TraesCS5B02G556600.1
Protein ID
Gene ID TraesCS5B02G556600
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 1.60E-102
Motif start 47
Motif end 373
Protein seq >TraesCS5B02G556600.1
MASAAAPLIVSLLCCTALAVHASHVVYPELQSLEATEVDKELRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAV
WGNIIWAHSVSTDLVDWVALEPGIYPSKPFDINGCWSGSATILPNGVPVIMYTGIDPKERQVQNVAYPANLSDPFLRKWV
KPDYNPIINPDHGINASAFRDPTTAWYGPDGHWRLVVGSKENMRGIAVLYRSRDFRRWIKAHHSLHAGLTGMWECPDFYP
VAVAGGRRHHRSGVDTRELHDSTVAAEVKYVLKVSLDVTRYEYYTIGWYDHAKDRYTPDLDFPDNDYGLRYDYGDFYASK
SFYDPVKKRRVLWGWANESDTVPDDRNKGWAGIQAIPRKIFLSRSGRQLIQWPVEEIKSLRAKHVNVSNKAVKGGEYFKI
DGFKSVQSDVEAAFVIKNLEKAEKFDTAWQTDAQGLCKKLNSHVKGGVGPFGLWLLASDDLKERTAVFFRVFKNNDTSYV
VLMCNDPTRSSYESLIYRPTFAGFVNVDITKTKKIALRTLIDHSVVESFGAGGKTCILTRVYPRKAVGDNAHLFVFNNGE
SDIKLTNLRAWEMKTPTMNKRLGQ*
CDS seq >TraesCS5B02G556600.1
ATGGCGTCGGCGGCGGCGCCATTGATCGTGTCTCTGTTGTGCTGCACGGCGTTGGCGGTCCACGCGTCGCATGTCGTCTA
CCCGGAGCTCCAGTCGTTGGAGGCCACGGAGGTGGACAAGGAGCTGCGCACCGGGTACCACTTCCAGCCCCCCAAGCATT
GGATCAATGATCCAAATGGGCCGATGTACTACAAGGGGCTGTACCATCTCTTCTACCAGTACAACCCAAAGGGCGCCGTG
TGGGGGAACATCATCTGGGCGCACTCGGTGTCGACGGACCTCGTCGACTGGGTGGCGTTGGAGCCCGGGATCTACCCGTC
CAAGCCGTTCGACATCAACGGTTGCTGGTCGGGCTCCGCCACCATTCTGCCCAACGGCGTCCCGGTCATCATGTACACAG
GCATCGACCCCAAGGAACGCCAGGTGCAGAACGTCGCGTACCCGGCCAACCTCTCCGACCCCTTCCTCCGCAAGTGGGTC
AAGCCCGACTATAACCCCATCATCAACCCCGACCACGGCATCAACGCCAGCGCCTTCCGTGATCCCACCACCGCTTGGTA
CGGGCCAGACGGACACTGGAGGCTGGTGGTGGGCAGCAAGGAGAACATGAGGGGGATCGCGGTGTTGTACCGGAGCCGTG
ACTTTAGGAGATGGATCAAGGCACACCACTCGCTGCACGCTGGGCTCACGGGGATGTGGGAGTGCCCAGACTTTTACCCC
GTGGCGGTGGCCGGCGGCAGACGTCACCACCGGAGCGGTGTGGACACCAGAGAGCTGCATGACAGCACAGTCGCTGCGGA
GGTAAAATATGTGCTCAAGGTGAGCCTCGACGTAACGCGCTACGAGTACTACACCATTGGCTGGTACGACCATGCCAAGG
ACAGGTACACCCCGGACCTCGACTTCCCAGACAATGACTACGGTCTCCGATACGACTACGGCGACTTCTATGCATCGAAG
TCGTTCTATGACCCGGTCAAGAAGCGCCGCGTGCTCTGGGGCTGGGCCAATGAATCCGACACTGTCCCCGACGACCGCAA
CAAGGGTTGGGCCGGCATCCAGGCGATACCGAGGAAGATCTTCCTGTCACGGAGCGGGAGGCAGCTAATTCAGTGGCCGG
TAGAGGAGATCAAGTCATTGCGCGCGAAGCACGTCAATGTCAGCAACAAGGCCGTCAAGGGTGGCGAGTACTTCAAGATC
GACGGCTTCAAATCCGTGCAGTCGGACGTGGAGGCGGCGTTCGTGATCAAGAACCTTGAGAAGGCAGAGAAGTTCGACAC
CGCGTGGCAGACAGACGCGCAAGGGCTGTGCAAGAAGCTCAACTCACATGTTAAGGGCGGCGTCGGGCCGTTTGGTCTCT
GGTTGCTCGCCTCTGACGACCTCAAGGAGAGAACAGCTGTTTTCTTCAGGGTATTCAAGAACAACGACACTAGCTACGTC
GTGCTTATGTGCAACGACCCTACAAGGTCGTCGTACGAGTCGCTGATCTACAGGCCGACCTTCGCCGGCTTCGTCAACGT
CGACATAACCAAGACCAAGAAGATCGCCCTCAGGACATTGATCGACCACTCTGTCGTGGAAAGTTTTGGCGCCGGCGGCA
AGACGTGCATCCTGACGAGGGTCTACCCGAGGAAGGCCGTCGGGGACAACGCACACCTATTTGTCTTCAACAATGGCGAG
TCAGACATCAAGCTCACCAACCTGCGTGCATGGGAGATGAAGACCCCCACGATGAACAAGCGTCTGGGGCAGTAG
Ta_5B:705055459-705055467:- does not have available information here.