
Microexon ID | Ta_5B:705055459-705055467:- |
Species | Triticum Aestivum | Coordinates | 5B:705055459..705055467 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | GAGCTGCGCACCGGGTACCACTTCCAGCCCCCCAAGCATTGGATCAATGATCCAAATGGGCCGATGTACTACAAGGGGCTGTACCATCTCTTCTACCAGTACAACCCA |
Microexon-tag Amino Acid Seq | ELRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNP |
Microexon-tag spanning region | 705055270-705055667 |
Microexon-tag prediction score | 0.9681 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5B02G556600.1x |
Reference Transcript ID | TraesCS5B02G556600.1 |
Gene ID | TraesCS5B02G556600 |
Gene Name | NA |
Transcript ID | TraesCS5B02G556600.1 |
Protein ID | |
Gene ID | TraesCS5B02G556600 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.60E-102 |
Motif start | 47 |
Motif end | 373 |
Protein seq | >TraesCS5B02G556600.1 MASAAAPLIVSLLCCTALAVHASHVVYPELQSLEATEVDKELRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAV WGNIIWAHSVSTDLVDWVALEPGIYPSKPFDINGCWSGSATILPNGVPVIMYTGIDPKERQVQNVAYPANLSDPFLRKWV KPDYNPIINPDHGINASAFRDPTTAWYGPDGHWRLVVGSKENMRGIAVLYRSRDFRRWIKAHHSLHAGLTGMWECPDFYP VAVAGGRRHHRSGVDTRELHDSTVAAEVKYVLKVSLDVTRYEYYTIGWYDHAKDRYTPDLDFPDNDYGLRYDYGDFYASK SFYDPVKKRRVLWGWANESDTVPDDRNKGWAGIQAIPRKIFLSRSGRQLIQWPVEEIKSLRAKHVNVSNKAVKGGEYFKI DGFKSVQSDVEAAFVIKNLEKAEKFDTAWQTDAQGLCKKLNSHVKGGVGPFGLWLLASDDLKERTAVFFRVFKNNDTSYV VLMCNDPTRSSYESLIYRPTFAGFVNVDITKTKKIALRTLIDHSVVESFGAGGKTCILTRVYPRKAVGDNAHLFVFNNGE SDIKLTNLRAWEMKTPTMNKRLGQ* |
CDS seq | >TraesCS5B02G556600.1 ATGGCGTCGGCGGCGGCGCCATTGATCGTGTCTCTGTTGTGCTGCACGGCGTTGGCGGTCCACGCGTCGCATGTCGTCTA CCCGGAGCTCCAGTCGTTGGAGGCCACGGAGGTGGACAAGGAGCTGCGCACCGGGTACCACTTCCAGCCCCCCAAGCATT GGATCAATGATCCAAATGGGCCGATGTACTACAAGGGGCTGTACCATCTCTTCTACCAGTACAACCCAAAGGGCGCCGTG TGGGGGAACATCATCTGGGCGCACTCGGTGTCGACGGACCTCGTCGACTGGGTGGCGTTGGAGCCCGGGATCTACCCGTC CAAGCCGTTCGACATCAACGGTTGCTGGTCGGGCTCCGCCACCATTCTGCCCAACGGCGTCCCGGTCATCATGTACACAG GCATCGACCCCAAGGAACGCCAGGTGCAGAACGTCGCGTACCCGGCCAACCTCTCCGACCCCTTCCTCCGCAAGTGGGTC AAGCCCGACTATAACCCCATCATCAACCCCGACCACGGCATCAACGCCAGCGCCTTCCGTGATCCCACCACCGCTTGGTA CGGGCCAGACGGACACTGGAGGCTGGTGGTGGGCAGCAAGGAGAACATGAGGGGGATCGCGGTGTTGTACCGGAGCCGTG ACTTTAGGAGATGGATCAAGGCACACCACTCGCTGCACGCTGGGCTCACGGGGATGTGGGAGTGCCCAGACTTTTACCCC GTGGCGGTGGCCGGCGGCAGACGTCACCACCGGAGCGGTGTGGACACCAGAGAGCTGCATGACAGCACAGTCGCTGCGGA GGTAAAATATGTGCTCAAGGTGAGCCTCGACGTAACGCGCTACGAGTACTACACCATTGGCTGGTACGACCATGCCAAGG ACAGGTACACCCCGGACCTCGACTTCCCAGACAATGACTACGGTCTCCGATACGACTACGGCGACTTCTATGCATCGAAG TCGTTCTATGACCCGGTCAAGAAGCGCCGCGTGCTCTGGGGCTGGGCCAATGAATCCGACACTGTCCCCGACGACCGCAA CAAGGGTTGGGCCGGCATCCAGGCGATACCGAGGAAGATCTTCCTGTCACGGAGCGGGAGGCAGCTAATTCAGTGGCCGG TAGAGGAGATCAAGTCATTGCGCGCGAAGCACGTCAATGTCAGCAACAAGGCCGTCAAGGGTGGCGAGTACTTCAAGATC GACGGCTTCAAATCCGTGCAGTCGGACGTGGAGGCGGCGTTCGTGATCAAGAACCTTGAGAAGGCAGAGAAGTTCGACAC CGCGTGGCAGACAGACGCGCAAGGGCTGTGCAAGAAGCTCAACTCACATGTTAAGGGCGGCGTCGGGCCGTTTGGTCTCT GGTTGCTCGCCTCTGACGACCTCAAGGAGAGAACAGCTGTTTTCTTCAGGGTATTCAAGAACAACGACACTAGCTACGTC GTGCTTATGTGCAACGACCCTACAAGGTCGTCGTACGAGTCGCTGATCTACAGGCCGACCTTCGCCGGCTTCGTCAACGT CGACATAACCAAGACCAAGAAGATCGCCCTCAGGACATTGATCGACCACTCTGTCGTGGAAAGTTTTGGCGCCGGCGGCA AGACGTGCATCCTGACGAGGGTCTACCCGAGGAAGGCCGTCGGGGACAACGCACACCTATTTGTCTTCAACAATGGCGAG TCAGACATCAAGCTCACCAACCTGCGTGCATGGGAGATGAAGACCCCCACGATGAACAAGCGTCTGGGGCAGTAG |
Ta_5B:705055459-705055467:- does not have available information here.