
Microexon ID | Ta_4D:502709337-502709345:+ |
Species | Triticum Aestivum | Coordinates | 4D:502709337..502709345 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCGAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CTGCTCCGGACGGGCTACCACTTCCAACCCCCCATGAACTGGATCAACGATCCGAATGGTCCGCTCTACTACAAGGGATGGTACCACCTGTTCTACCAGTACAACCCC |
Microexon-tag Amino Acid Seq | MLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNP |
Microexon-tag spanning region | 502708597-502709679 |
Microexon-tag prediction score | 0.9672 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4D02G350500.1x |
Reference Transcript ID | TraesCS4D02G350500.1 |
Gene ID | TraesCS4D02G350500 |
Gene Name | NA |
Transcript ID | TraesCS4D02G350500.1 |
Protein ID | |
Gene ID | TraesCS4D02G350500 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.60E-100 |
Motif start | 53 |
Motif end | 374 |
Protein seq | >TraesCS4D02G350500.1 MGAPKWVVAPLALLLLLQLAGASHDVRRSLEAEAATPSVPASILSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQY NPKGAVWGNIIWAHSVSRDLINWMALDPAIKPSIPTDQYGVWSGSATILPNGTVAMLYTGIDRPGTNYQIQNIAFPKDPS DPLLREWVKPGYNPIAVPEAGINATQFRDPTTAWHAGDGLWRMLVGGLKPGTLRGMAILYRSRDFKHWVRAKHPLHSALT GMWECPDFFPVREPGKTDGLDTSEFGPRYKYVLKNSLDLTRYDYYTVGTYNNRTERYVPDNPTGDVYQRLQYDYGNFYAS KTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGKQLLQWPVEELDQLRGKAVSVGDKLVKPGQHFE VTGLQSYQSDVEVSFEVSSLDKAEPFDPAYANDAQKLCGMKNADVKGGVGPFGLWVLASDNLAEKTAVFFRVFKDGHGKP LVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGV TDIKVSKLTAWEMKKPMMNGA* |
CDS seq | >TraesCS4D02G350500.1 ATGGGGGCTCCCAAATGGGTGGTTGCGCCATTGGCGCTGCTGCTCCTCCTGCAGCTCGCCGGCGCGTCCCATGACGTCCG ACGGAGCCTTGAGGCCGAGGCGGCGACGCCGTCCGTGCCGGCCTCCATTCTTAGCCCCCTGCTCCGGACGGGCTACCACT TCCAACCCCCCATGAACTGGATCAACGATCCGAATGGTCCGCTCTACTACAAGGGATGGTACCACCTGTTCTACCAGTAC AACCCCAAGGGCGCGGTGTGGGGCAACATCATCTGGGCGCACTCGGTGTCGCGCGACCTCATCAACTGGATGGCCCTCGA CCCCGCCATCAAGCCCAGCATTCCGACCGACCAGTACGGCGTCTGGTCCGGCTCGGCGACGATCCTGCCCAACGGCACGG TGGCGATGCTCTACACCGGCATCGACCGCCCGGGCACCAACTACCAGATCCAGAACATCGCCTTCCCCAAGGACCCCTCC GACCCGCTGCTCCGCGAGTGGGTCAAGCCCGGCTACAACCCCATCGCCGTCCCCGAGGCCGGCATCAACGCCACGCAGTT CCGCGACCCGACCACCGCCTGGCACGCCGGCGATGGCCTCTGGCGCATGCTCGTGGGCGGGCTCAAGCCCGGCACGCTCC GCGGCATGGCCATCCTGTACCGGAGCAGGGACTTCAAGCACTGGGTCCGCGCCAAGCACCCGCTCCACTCGGCCCTCACC GGCATGTGGGAGTGCCCCGACTTCTTCCCCGTGCGCGAGCCCGGGAAGACGGACGGCCTCGACACCTCCGAGTTCGGCCC GCGCTACAAGTACGTGCTCAAGAACAGCCTCGACCTCACCCGCTACGACTACTACACCGTGGGCACCTACAACAACCGCA CGGAGCGGTACGTGCCCGACAACCCCACCGGCGACGTCTACCAGCGGCTCCAGTACGACTACGGCAACTTCTACGCGTCC AAGACCTTCTACGACCCGGCCAAGAACCGCCGCGTGCTGCTGGGCTGGGCCAACGAGTCCGACAGCGTCGCGCACGACAA CGCCAAGGGATGGGCCGGCATCCACGCGATCCCGAGGAAGATATGGCTGGACCCCAGCGGCAAGCAGCTGCTGCAGTGGC CCGTGGAGGAGCTGGACCAGCTGAGGGGCAAGGCTGTCAGCGTGGGTGACAAGCTCGTCAAGCCCGGCCAGCACTTTGAG GTCACTGGCCTGCAGTCCTACCAGTCTGACGTGGAGGTGAGCTTCGAGGTGTCGAGCCTGGACAAGGCGGAGCCGTTCGA TCCGGCCTACGCCAACGACGCGCAGAAGCTCTGCGGGATGAAGAACGCCGACGTCAAGGGCGGGGTGGGGCCCTTCGGCC TCTGGGTCCTGGCCTCTGACAACCTGGCCGAGAAGACCGCCGTGTTCTTCAGAGTCTTCAAGGATGGGCATGGCAAGCCT CTCGTCCTCATGTGCAGTGACCCCACCAAGTCATCTCTCACCCCGGGTCTATACAAGCCGACTTTTGCCGGGTTTGTCGA CACCGACATTTCGTCCGGGAAGATCTCTCTGAGAAGCTTGATCGACCGATCGGTGGTTGAGAGCTTCGGCGCCGGAGGGA AGACCTGCATCCTATCGAGAGTGTACCCATCCATGGCGATCGGGAAAGACGCACACCTTTATGTGTTCAACAACGGGGTG ACCGATATCAAGGTGTCCAAACTAACGGCGTGGGAGATGAAAAAACCAATGATGAATGGTGCCTAA |
Ta_4D:502709337-502709345:+ does not have available information here.