
Microexon ID | Ta_4B:647623620-647623628:+ |
Species | Triticum Aestivum | Coordinates | 4B:647623620..647623628 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCGAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CTGCTCCGGACCGGCTACCACTTCCAGCCCCCCATGAACTGGATCAACGATCCGAATGGGCCACTCTACTACAAGGGATGGTACCACCTCTTCTACCAGTACAACCCC |
Microexon-tag Amino Acid Seq | MLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNP |
Microexon-tag spanning region | 647622832-647623975 |
Microexon-tag prediction score | 0.9697 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4B02G356800.1x |
Reference Transcript ID | TraesCS4B02G356800.1 |
Gene ID | TraesCS4B02G356800 |
Gene Name | NA |
Transcript ID | TraesCS4B02G356800.1 |
Protein ID | |
Gene ID | TraesCS4B02G356800 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 5.70E-100 |
Motif start | 53 |
Motif end | 374 |
Protein seq | >TraesCS4B02G356800.1 MGAPKWVVAPLALLLLLQLAGASHDVRRSLEAEAASPSVPASILSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQY NPKGAVWGNIIWAHSVSRDLINWIALDPAIKPSIPTDQFGVWSGSATILPNGTVAMLYTGIDRPGTNYQIQNIAFPKDPS DPLLREWVKPGYNPIAIPEAGMNATQFRDPTTAWHAGDGLWRMLVGGLKPGTLRGMAILYRSRDFKHWVRAKHPLHSALT GMWECPDFFPVREPGHPDGLDTSEFGPHYKYVLKNSLDLTRYDYYTVGTYNNRTERYVPDNPTGDVYQRLQYDYGNFYAS KTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGKQLLQWPVEELDQLRGKAVSVGDKVVMPGQHFE VTGLQSYQSDVEVSFEVPSLDKAEPFHPAYANDAQKLCGMKNADVKGGVGPFGLWVLASDNLAEKTAVFFRVFKDGHGKP LVLMCSDPTKSSLTAGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGRTCILSRVYPSMAIGKDAHLHVFNNGV TDIKVSKLTAWEMKKPMMNGA* |
CDS seq | >TraesCS4B02G356800.1 ATGGGGGCTCCGAAATGGGTGGTTGCGCCATTGGCGCTGCTGCTGCTCCTGCAGCTCGCCGGCGCGTCCCATGACGTCCG CCGCAGCCTCGAGGCCGAGGCGGCGTCGCCGTCCGTGCCGGCCTCCATTCTCAGCCCCCTGCTCCGGACCGGCTACCACT TCCAGCCCCCCATGAACTGGATCAACGATCCGAATGGGCCACTCTACTACAAGGGATGGTACCACCTCTTCTACCAGTAC AACCCCAAGGGCGCCGTGTGGGGCAACATCATCTGGGCGCACTCGGTGTCGCGCGACCTCATCAACTGGATCGCCCTCGA CCCGGCCATCAAGCCCTCCATCCCCACCGACCAGTTCGGCGTCTGGTCCGGCTCCGCCACCATCCTCCCCAACGGCACGG TGGCGATGCTCTACACCGGCATCGACCGCCCGGGCACCAACTACCAGATCCAGAACATCGCCTTCCCCAAGGACCCCTCC GACCCGCTCCTCCGCGAGTGGGTCAAGCCCGGGTACAACCCCATCGCCATCCCCGAGGCCGGCATGAACGCCACCCAGTT CCGCGACCCGACCACCGCCTGGCACGCCGGCGACGGGCTGTGGCGCATGCTCGTGGGCGGCCTCAAGCCCGGCACGCTCC GCGGGATGGCCATCCTGTACCGGAGCCGGGACTTCAAGCACTGGGTCCGCGCCAAGCACCCGCTCCACTCGGCCCTCACC GGCATGTGGGAGTGCCCCGACTTCTTCCCCGTGCGCGAGCCGGGCCACCCGGACGGCCTCGACACGTCGGAGTTTGGCCC GCACTACAAGTACGTGCTCAAGAACAGCCTCGACCTCACCCGCTACGACTACTACACGGTCGGCACCTACAACAACCGCA CGGAGCGGTACGTGCCCGACAACCCCACCGGCGACGTCTACCAGCGGCTCCAGTACGACTACGGCAACTTCTACGCGTCC AAGACCTTCTACGACCCCGCCAAGAACCGCCGCGTGCTGCTCGGCTGGGCCAACGAGTCCGACAGCGTCGCCCACGACAA CGCCAAGGGATGGGCCGGCATCCACGCGATCCCGAGGAAGATATGGCTGGACCCCAGCGGGAAGCAGCTGCTGCAGTGGC CCGTGGAGGAGCTGGACCAGCTGAGGGGCAAGGCTGTCAGCGTGGGTGACAAGGTCGTCATGCCCGGCCAGCACTTTGAG GTCACTGGCCTACAGTCCTACCAGTCTGACGTGGAGGTGAGCTTCGAGGTGCCGAGCCTGGACAAGGCGGAGCCGTTCCA TCCGGCCTACGCCAACGACGCGCAGAAGCTCTGCGGGATGAAGAACGCCGACGTCAAGGGCGGGGTGGGGCCCTTCGGCC TCTGGGTCCTGGCCTCCGACAACCTGGCCGAGAAGACCGCCGTGTTCTTCAGAGTATTCAAGGACGGGCATGGCAAGCCT CTCGTCCTCATGTGCAGTGACCCCACCAAGTCATCTCTCACCGCGGGTCTATACAAGCCGACGTTTGCCGGGTTTGTCGA CACCGACATTTCGTCCGGGAAGATCTCCTTGAGAAGCTTGATCGACCGTTCGGTGGTTGAGAGCTTCGGCGCCGGAGGGA GGACCTGCATCCTATCGAGAGTGTACCCATCCATGGCGATCGGGAAAGACGCGCATCTTCACGTGTTCAACAACGGGGTG ACCGATATCAAGGTGTCCAAACTAACGGCATGGGAGATGAAGAAGCCGATGATGAACGGCGCCTAA |
Ta_4B:647623620-647623628:+ does not have available information here.