
Microexon ID | Ta_4A:739415986-739415994:+ |
Species | Triticum Aestivum | Coordinates | 4A:739415986..739415994 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAGCGCACCGGCTACCATTTCCAGCCGGACAAGTACTACCAGAACGATCCCAACGGTCCGGTGTACTACGGCGGATGGTACCACTTCTTCTACCAATACAACCCG |
Microexon-tag Amino Acid Seq | WQRTGYHFQPDKYYQNDPNGPVYYGGWYHFFYQYNP |
Microexon-tag spanning region | 739415773-739416158 |
Microexon-tag prediction score | 0.9527 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G486000.1x |
Reference Transcript ID | TraesCS4A02G486000.1 |
Gene ID | TraesCS4A02G486000 |
Gene Name | NA |
Transcript ID | TraesCS4A02G486000.1 |
Protein ID | |
Gene ID | TraesCS4A02G486000 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 6.20E-89 |
Motif start | 128 |
Motif end | 451 |
Protein seq | >TraesCS4A02G486000.1 MDSSRVILIPGTPPLPYAAYEQLPSSSADAKQGQEEQRAGGGLRWRACAAVLAASAVVALVVAAAVFGAGGAGRDAVAAS VPATSATGFPRSRGKEHGVSEKTSGAYSANGGFPWSNAMLQWQRTGYHFQPDKYYQNDPNGPVYYGGWYHFFYQYNPSGS VWEPQIVWGHAVSKDLIHWRHLPPALVPDQWYDIKGVLTGSITVLPDGKVVLLYTGNTETFAQVTCLAEPADPSDPLLRE WVKHPANPVVFPPPGIGMKDFRDPTTAWFDESDGTWRTIIGSKNDSDHSGIVFSYKTKDFVSYELMPGYMYRGPKGTGEY ECIDLYAVGGGRKASDMYNSTAEDVLYVLKESSDDDRHDWYSLGRFDAAANKWTPIDTELELGVGLRYDWGKYYASKSFY DPVKQRRVVWAYVGETDSERADITKGWANLQSIPRTVELDEKTRTNLIQWPVEELDTLRINTTDLSGFTVGAGSVVPLHL HQTAQLDIEATFRIDASAIEALNEADVSYNCTTSSGAATRGALGPFGLLVLANRALTEQTGVYFYVSKGLDGGLRTHFCH DELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAIYAAAGVYMFNNATGTSVTAE KLVVHDMDSSYNHIYTDDDLVVVN* |
CDS seq | >TraesCS4A02G486000.1 ATGGACTCGTCTCGCGTCATACTCATCCCCGGCACGCCGCCGCTGCCGTACGCCGCCTACGAGCAGCTGCCGTCCTCCTC CGCCGACGCCAAGCAGGGCCAGGAGGAGCAGCGGGCCGGCGGTGGCCTGAGGTGGCGCGCGTGCGCCGCCGTCCTGGCCG CCTCGGCCGTGGTGGCGCTCGTCGTGGCCGCCGCGGTCTTCGGCGCCGGCGGGGCGGGCCGTGACGCGGTGGCCGCCTCC GTGCCGGCGACCTCGGCGACGGGGTTCCCGAGGAGCAGGGGCAAGGAGCACGGCGTGTCGGAGAAGACGTCGGGGGCCTA CTCCGCCAACGGCGGGTTCCCGTGGAGCAACGCCATGCTGCAGTGGCAGCGCACCGGCTACCATTTCCAGCCGGACAAGT ACTACCAGAACGATCCCAACGGTCCGGTGTACTACGGCGGATGGTACCACTTCTTCTACCAATACAACCCGTCGGGCTCC GTGTGGGAGCCCCAGATCGTGTGGGGCCACGCCGTGTCCAAGGACCTCATCCACTGGCGCCACCTCCCGCCGGCCCTGGT GCCCGACCAGTGGTACGACATCAAGGGCGTCCTCACCGGCTCCATCACCGTGCTCCCCGACGGCAAGGTCGTCCTCCTCT ACACGGGCAACACCGAGACGTTCGCGCAGGTGACCTGCCTCGCGGAGCCCGCCGACCCGAGCGACCCGCTCCTCCGTGAG TGGGTGAAGCACCCCGCCAACCCCGTCGTGTTCCCGCCCCCCGGCATCGGCATGAAGGACTTCCGCGACCCCACCACGGC CTGGTTCGACGAGTCGGACGGCACGTGGCGCACCATCATCGGCTCCAAGAACGACTCGGACCACTCCGGCATCGTCTTCT CCTACAAGACCAAGGACTTCGTCAGCTACGAGCTGATGCCCGGGTACATGTACCGCGGCCCCAAGGGCACCGGCGAGTAC GAGTGCATCGACCTCTACGCCGTCGGCGGGGGCCGCAAGGCCAGCGACATGTACAACTCGACGGCCGAGGACGTGCTGTA CGTGCTCAAGGAGAGCAGCGACGACGACCGGCACGACTGGTACTCGCTGGGCCGGTTCGACGCCGCCGCCAACAAGTGGA CGCCGATCGACACGGAGCTGGAGCTCGGCGTCGGGCTCCGGTACGACTGGGGCAAGTACTACGCGTCCAAGTCCTTCTAC GACCCCGTGAAGCAGCGGCGCGTGGTGTGGGCGTACGTCGGCGAGACCGACTCGGAGCGCGCCGACATCACCAAGGGGTG GGCCAACCTCCAGTCGATTCCGAGGACGGTGGAGCTTGACGAGAAGACCCGAACGAACCTCATCCAATGGCCCGTGGAGG AGCTCGATACCCTCCGCATCAACACCACCGATCTCAGCGGCTTCACCGTTGGCGCCGGCTCCGTCGTCCCCCTCCACCTC CACCAGACCGCTCAGCTTGACATCGAGGCAACCTTCCGCATCGATGCCTCCGCCATCGAGGCCCTCAACGAGGCCGATGT TAGCTACAACTGCACCACTAGCAGCGGCGCCGCCACCCGCGGCGCGCTTGGGCCCTTCGGCCTTCTTGTCCTCGCCAACC GCGCCCTGACCGAACAGACGGGAGTCTACTTCTATGTGTCCAAGGGCCTCGATGGTGGTCTTCGGACTCACTTCTGCCAC GACGAGTTGCGGTCGTCACACGCTAGTGATGTGGTGAAGCGGGTGGTGGGTAGCACGGTGCCGGTGCTCGACGGCGAGGA TTTCTCCGTCAGGGTGCTCGTGGACCACTCCATTGTCCAGAGCTTCGCGATGGGCGGGAGGTTGACGGCAACGTCGAGGG CATACCCGACCGAGGCCATCTACGCGGCAGCGGGGGTCTACATGTTCAACAACGCCACCGGCACTAGCGTCACCGCCGAG AAGCTTGTCGTGCATGATATGGACTCATCGTACAACCATATATACACAGATGATGACTTGGTAGTTGTCAATTAG |
Ta_4A:739415986-739415994:+ does not have available information here.