
Microexon ID | Ta_4A:739310851-739310859:+ |
Species | Triticum Aestivum | Coordinates | 4A:739310851..739310859 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAGCGCACCGGCTTCCATTTCCAGCCCGAGAAGAACTACATGAACGATCCCAACGGTCCGGTGTACTATCGTGGATGGTACCACTTCTTCTACCAGCACAACCCC |
Microexon-tag Amino Acid Seq | WQRTGFHFQPEKNYMNDPNGPVYYRGWYHFFYQHNP |
Microexon-tag spanning region | 739310643-739311371 |
Microexon-tag prediction score | 0.9609 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G485900.1x |
Reference Transcript ID | TraesCS4A02G485900.1 |
Gene ID | TraesCS4A02G485900 |
Gene Name | NA |
Transcript ID | TraesCS4A02G485900.1 |
Protein ID | |
Gene ID | TraesCS4A02G485900 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.30E-89 |
Motif start | 113 |
Motif end | 435 |
Protein seq | >TraesCS4A02G485900.1 MESSRGILIPGTPPLPHAYEPLPSSLADANGQEVRRTSGGVRWRAWAAVLAVVALVVAAAAFGASRVDPDAVASSVPATA DHGVLEKTSEAYSASGGFPWSNAMLQWQRTGFHFQPEKNYMNDPNGPVYYRGWYHFFYQHNPGGTGWGNISWGHAVSRDM VHWRHLPLAMVPDHWYDIEGVLTGSITVLPDGRVILLYTGNTETFAQVTCLAEAADPSDSLLREWVKHPANPVVFPPPGI GMKDYRDPTTAWFDNSDNTWRIIIGSKNDTDHSGIVFTYKTKDFVSYEMIPGYLYRGPAGTGMYECIDMFAVGGGRKASD MYNSTAEDVLYVLKESSDDDRRDYYALGRFDAAANTWTPIDPERELGVALRYDYGRYDASKSFYDPVKQRRIVWGYVVET DSWSADAAKGWANLQSIPRTVELDEKTRTNLIQWPVEELDTLRINTTDLSGITVGAGSVVSLPLHQTSQLDIEASFRINA SAIEALNEVDVGYNCTMTSGAATRGALGPFGILVLANVALTEQTAVYFYVSKGLDGGLRTHFCHDELRSTHATDVAKEVV GSTVPVLDGEDFSVRVLVDHSIVQSFVMGGRMTATSRAYPTEAIYAAARVYLFNNATSASITTEKLIVHDMDSSYNRIFT DNDLVVLN* |
CDS seq | >TraesCS4A02G485900.1 ATGGAGTCGTCACGCGGCATCCTCATCCCCGGCACGCCGCCGTTGCCCCACGCGTACGAGCCGCTGCCCTCCTCCTTGGC CGACGCCAACGGCCAGGAGGTCCGGCGGACCAGCGGCGGCGTGAGGTGGCGCGCGTGGGCCGCCGTGCTGGCCGTGGTGG CGCTCGTCGTCGCCGCGGCGGCCTTTGGGGCCAGCCGGGTGGATCCGGACGCGGTGGCCTCCTCCGTACCGGCTACGGCG GACCACGGCGTGTTGGAGAAGACGTCCGAGGCATACTCCGCCAGCGGCGGGTTCCCGTGGAGCAACGCCATGCTGCAGTG GCAGCGCACCGGCTTCCATTTCCAGCCCGAGAAGAACTACATGAACGATCCCAACGGTCCGGTGTACTATCGTGGATGGT ACCACTTCTTCTACCAGCACAACCCCGGGGGCACCGGGTGGGGCAACATCTCATGGGGCCACGCCGTGTCACGGGACATG GTCCACTGGCGCCACCTACCGCTCGCCATGGTGCCCGACCACTGGTACGACATCGAGGGCGTCCTCACCGGATCCATCAC CGTGCTCCCCGACGGCAGAGTCATCCTGCTCTACACAGGGAACACCGAGACGTTCGCGCAGGTGACCTGCCTCGCGGAGG CCGCCGACCCGAGCGACTCCCTCCTCCGCGAGTGGGTCAAGCACCCCGCCAACCCCGTCGTGTTCCCGCCCCCCGGCATC GGCATGAAGGACTACCGCGATCCCACCACGGCGTGGTTCGATAACTCCGACAACACGTGGCGCATCATCATTGGCTCCAA GAACGACACCGACCACTCCGGCATCGTCTTCACATACAAGACCAAGGACTTCGTCAGCTACGAGATGATACCGGGGTACC TGTACCGCGGTCCAGCCGGCACCGGCATGTACGAGTGCATCGACATGTTCGCCGTTGGCGGTGGCCGCAAGGCCAGCGAC ATGTACAACTCGACCGCCGAGGACGTGCTGTACGTGCTCAAGGAGAGCAGCGACGACGACCGGCGTGACTATTACGCCCT CGGGAGGTTCGACGCGGCGGCCAACACATGGACGCCGATCGACCCCGAGCGGGAACTCGGCGTCGCGCTGCGGTACGACT ATGGCAGGTACGACGCGTCCAAGTCCTTCTACGACCCCGTGAAGCAGCGGCGGATCGTCTGGGGGTACGTCGTCGAGACC GACTCCTGGAGCGCCGACGCCGCCAAGGGGTGGGCCAACCTTCAGTCGATTCCGAGAACGGTGGAGCTTGACGAGAAGAC CCGGACGAACCTCATCCAATGGCCGGTGGAGGAGCTCGATACCCTCCGCATCAACACCACCGATCTCAGCGGCATCACTG TCGGTGCCGGATCCGTCGTCTCCCTCCCCCTCCACCAGACCTCCCAACTCGACATCGAGGCATCCTTCCGCATCAACGCC TCCGCCATTGAGGCCCTCAACGAGGTCGACGTCGGCTACAACTGCACCATGACCAGTGGTGCAGCCACCCGCGGCGCCCT CGGCCCCTTCGGCATTCTCGTCCTCGCCAACGTCGCCCTGACCGAACAGACGGCGGTGTACTTTTATGTGTCCAAGGGCC TCGACGGCGGTCTTCGGACGCACTTCTGCCACGATGAGTTGCGGTCGACACATGCTACCGATGTGGCGAAGGAGGTGGTG GGTAGCACGGTGCCGGTGCTCGATGGCGAGGATTTTTCCGTTAGGGTGCTCGTGGACCACTCCATCGTGCAGAGCTTTGT GATGGGCGGGAGGATGACGGCGACGTCAAGGGCGTACCCGACGGAGGCCATTTACGCGGCGGCTAGGGTGTACCTGTTCA ACAATGCTACCAGCGCCAGCATTACCACTGAGAAGCTCATCGTGCACGACATGGATTCGTCGTACAACCGGATATTCACA GACAACGACTTGGTAGTCCTCAATTAG |
Ta_4A:739310851-739310859:+ does not have available information here.