
Microexon ID | Ta_4A:739273502-739273510:+ |
Species | Triticum Aestivum | Coordinates | 4A:739273502..739273510 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | TGGCAGCGCACCGGGTTCCATTTCCAGCCCGAGAAGAACTACATGAACGATCCAAACGCTCCGATGTACTACCGTGGACGGTACCACTTCTTCTACCAGTACAACCCC |
Microexon-tag Amino Acid Seq | WQRTGFHFQPEKNYMNDPNAPMYYRGRYHFFYQYNP |
Microexon-tag spanning region | 739273279-739273680 |
Microexon-tag prediction score | 0.9621 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G485800.1x |
Reference Transcript ID | TraesCS4A02G485800.1 |
Gene ID | TraesCS4A02G485800 |
Gene Name | NA |
Transcript ID | TraesCS4A02G485800.1 |
Protein ID | |
Gene ID | TraesCS4A02G485800 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 2.10E-97 |
Motif start | 123 |
Motif end | 437 |
Protein seq | >TraesCS4A02G485800.1 MAPRDRRTTRSKDFLLSSGTAAVAVKSPGAVPDTPPVPFAYGGLLYQQSGGRRRWRECTVVLGAVAMVALFVTHALLPRA SVLSEETRGEARAEQNIMVTAGADADGFPWSNEMLQWQRTGFHFQPEKNYMNDPNAPMYYRGRYHFFYQYNPTGVVWGNI TWGHAVSRDLIHWRHLPLAMVPDQWYDIHGVLTGSATILPNGTVIVLYTGKTDTSAQVQCLALPADPDDPLLVNWTKHPA NPVILPPPGIGLQDFRDPTTAWFDESDLTWRTLIGSKDDNGHAGIALMYKTKDFIRYELIPGVLHRVEGTGMWECVDFYP VGGSNNSSEEALYVLKASMDDERHDYYALGRYDAATNTWTPLDPELDVGIGLRYDWGKFFAATSFYDPVKRRRVMWAYVG ETDSLSANVAKGWASVQTIPRTVVLDEKTRTNLLQWPVEEIETLRFNSTDYGVITIHTGSIIPLRLRQATQLDIEASFRL DTSAIAIINEANVNYNCSTSGGASTMGPLGPFGFLIHAAGNGGSEQLAVYFYVSRGLDGALRTHFCHDELLSSRANDVMK RVVGSTVPVLDGEALSVRVLVDHSIVESFAMGGRLTATSRVYPMEAIHTAAGVYLFNNATGSSITVEKLVVHEMASALYN QTFVADDD* |
CDS seq | >TraesCS4A02G485800.1 ATGGCTCCTCGAGACCGCAGGACGACCCGATCAAAAGATTTCCTCCTGAGCTCCGGAACGGCGGCCGTGGCGGTGAAGTC ACCCGGCGCCGTCCCGGACACGCCGCCGGTCCCGTTCGCGTACGGGGGGCTGCTGTACCAGCAGAGCGGCGGGCGGCGGA GGTGGCGCGAGTGCACCGTCGTGCTGGGCGCCGTGGCCATGGTGGCGCTCTTCGTCACCCACGCGCTCCTCCCAAGGGCC AGCGTGTTGTCCGAGGAGACGCGCGGGGAGGCACGAGCGGAGCAGAACATCATGGTCACCGCCGGCGCCGATGCCGACGG GTTCCCGTGGAGCAACGAGATGCTGCAGTGGCAGCGCACCGGGTTCCATTTCCAGCCCGAGAAGAACTACATGAACGATC CAAACGCTCCGATGTACTACCGTGGACGGTACCACTTCTTCTACCAGTACAACCCCACGGGCGTCGTCTGGGGCAACATC ACGTGGGGCCACGCCGTGTCGCGGGACCTGATCCATTGGCGCCACCTCCCGCTCGCCATGGTGCCCGACCAGTGGTACGA CATTCATGGCGTCCTGACGGGCTCCGCCACAATCCTCCCCAACGGCACCGTCATCGTGCTCTACACGGGGAAAACCGACA CCTCCGCTCAGGTCCAGTGCCTCGCCCTTCCCGCCGACCCGGATGACCCCCTCCTTGTCAACTGGACCAAGCATCCCGCC AACCCCGTCATCCTCCCGCCCCCCGGCATCGGCCTCCAGGACTTCCGCGACCCCACCACCGCCTGGTTTGACGAGTCGGA CCTGACATGGCGCACCCTCATCGGCTCCAAGGACGACAACGGCCACGCCGGCATCGCCTTGATGTACAAGACCAAGGACT TCATCAGGTACGAGCTCATCCCGGGGGTGCTCCACCGCGTCGAGGGCACCGGCATGTGGGAGTGCGTCGACTTCTACCCG GTCGGCGGCAGCAACAACTCCTCGGAGGAGGCGCTGTATGTCCTGAAGGCGAGCATGGACGATGAACGGCATGACTACTA CGCGCTCGGGAGGTATGATGCGGCGACCAACACGTGGACGCCGCTCGACCCAGAGCTGGACGTGGGGATCGGGCTGAGGT ACGACTGGGGAAAGTTTTTCGCTGCCACGTCTTTCTACGACCCGGTGAAACGGCGGCGCGTGATGTGGGCTTATGTCGGC GAGACCGACTCCTTGAGCGCCAACGTTGCCAAGGGATGGGCTTCCGTCCAGACGATTCCGAGGACGGTAGTGTTGGATGA GAAGACTCGGACGAACCTCCTCCAATGGCCGGTGGAGGAGATCGAGACCCTCCGCTTCAACAGCACCGACTATGGCGTCA TCACTATCCACACTGGATCCATTATACCTCTCCGCCTCCGCCAAGCCACACAGCTTGACATCGAGGCCTCCTTTCGCCTA GACACTTCCGCTATTGCCATCATCAACGAGGCTAACGTCAACTACAACTGCAGCACCAGCGGCGGAGCCTCAACCATGGG CCCACTTGGTCCCTTCGGCTTCCTCATCCACGCCGCTGGCAATGGTGGCAGCGAACAACTCGCGGTTTACTTCTATGTGT CGAGGGGCCTCGACGGGGCGCTCCGAACCCACTTCTGCCATGACGAGTTATTGTCGTCCCGAGCGAATGATGTAATGAAG CGGGTGGTGGGCAGCACAGTGCCAGTGCTCGACGGTGAGGCTCTATCTGTGAGGGTGCTCGTGGACCACTCGATCGTGGA GAGCTTCGCGATGGGCGGGAGGTTGACGGCGACGTCGCGTGTGTACCCGATGGAAGCCATCCACACAGCGGCGGGGGTGT ACCTTTTCAACAACGCCACCGGCTCCTCCATCACCGTCGAGAAGCTTGTAGTTCATGAGATGGCCTCGGCGTTGTACAAC CAGACTTTCGTGGCCGACGACGACTAG |
Ta_4A:739273502-739273510:+ does not have available information here.