
Microexon ID | Ta_4A:739152378-739152386:+ |
Species | Triticum Aestivum | Coordinates | 4A:739152378..739152386 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAATG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | TGGCAGCGCACTGGTTACCATTTCCAGCCGGACGGGAACTTCATGAACGATCCCAATGCTCCGATGTATTACCGTGGACTGTACCACTTCTTCTACCAGTACAATCCC |
Microexon-tag Amino Acid Seq | WQRTGYHFQPDGNFMNDPNAPMYYRGLYHFFYQYNP |
Microexon-tag spanning region | 739152110-739152702 |
Microexon-tag prediction score | 0.9549 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G485700.1x |
Reference Transcript ID | TraesCS4A02G485700.1 |
Gene ID | TraesCS4A02G485700 |
Gene Name | NA |
Transcript ID | TraesCS4A02G485700.1 |
Protein ID | |
Gene ID | TraesCS4A02G485700 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 7.40E-94 |
Motif start | 146 |
Motif end | 460 |
Protein seq | >TraesCS4A02G485700.1 MAPPRDRKISRSRDSLSSSGALAAAMKSRGASAVPDTPPVISGHAPQQHQRGGGGGGTRWRECAAVLGAVAVVVLVVTHA LLNVGDDVADPVARLRAATDEKAAVLSKKTPGEAQAEQEIKAAAGADADGSPWSSEMLQWQRTGYHFQPDGNFMNDPNAP MYYRGLYHFFYQYNPKGVVWNKIAWGHAVSPDLVHWRHLPVAMVPDQWYDINGVLTGSATMLPNGTVILLYTGNSETFAQ VQCLALPADPTDPLLRTWTKHPANPVIFPPPGIGDRDFRDPMAAWFDKSDNTWRTIIGSKDDHGHAGIALMYKTKDFIKY ELIPDPVHRVEGTGMWECIDLYPVSGGSNSPEEVIYVMKASVNDEWHDYYALGRFHAEANRWTPMDPEADVGIGMRVDWG KFYASTSFYDPVKQRRVSWGFVGETDSPNTDIAKGWASLQGIPRKVVLDQKTRTNILQWPVEEIDTLRYNATNFSGITIE SSSVITLPLRQVAQLDIEASFRLNASAIAALNEADVSYNCSTSGGATERGALGPFGLLIHATNSGSEQLAVYFYIYKGLD GGLRTQFCHDESGSSRAKELLKRVVGSTVPVLHGEALSARVLVDHSIVESFVMGGRMTVTSRVYPMKAIHAAGRVCVFNN ATGSAVTVEKLVVHEMASAPIQPYHDA* |
CDS seq | >TraesCS4A02G485700.1 ATGGCTCCTCCGCGGGACCGCAAGATAAGCCGATCAAGAGACTCCCTTTCCAGTTCCGGAGCGTTGGCCGCGGCGATGAA GTCACGCGGCGCCAGCGCTGTCCCCGACACGCCGCCGGTGATCTCTGGGCACGCGCCGCAGCAGCACCAGCGGGGTGGCG GCGGCGGCGGCACCAGGTGGCGCGAGTGCGCCGCCGTGCTGGGCGCCGTGGCCGTGGTGGTGCTCGTCGTCACCCATGCG CTCCTCAACGTGGGCGACGACGTGGCTGACCCGGTAGCCCGTCTCCGGGCAGCCACCGACGAGAAAGCGGCCGTTCTGTC CAAGAAGACTCCCGGGGAGGCCCAAGCCGAGCAGGAGATCAAGGCAGCCGCCGGCGCTGATGCCGACGGGTCCCCGTGGA GCAGCGAGATGCTGCAGTGGCAGCGCACTGGTTACCATTTCCAGCCGGACGGGAACTTCATGAACGATCCCAATGCTCCG ATGTATTACCGTGGACTGTACCACTTCTTCTACCAGTACAATCCCAAGGGCGTTGTGTGGAACAAGATCGCCTGGGGCCA CGCCGTGTCGCCGGACCTCGTCCACTGGCGCCATCTCCCGGTTGCCATGGTGCCCGATCAATGGTACGACATCAATGGCG TCCTGACGGGATCCGCCACCATGCTCCCCAATGGCACGGTCATTCTGCTCTACACGGGCAACAGCGAGACTTTTGCCCAG GTACAATGCCTCGCCCTCCCCGCAGACCCTACGGACCCCCTCCTCCGTACCTGGACCAAGCACCCTGCCAACCCCGTCAT CTTCCCGCCCCCCGGCATTGGCGACAGGGACTTCCGCGACCCCATGGCCGCATGGTTTGATAAGTCCGACAACACATGGC GCACTATCATAGGGTCCAAGGATGACCATGGTCATGCCGGTATTGCCCTTATGTACAAGACGAAAGACTTCATCAAGTAC GAGCTCATCCCGGACCCGGTTCACCGTGTCGAGGGCACCGGCATGTGGGAGTGCATTGACCTCTACCCCGTTAGCGGTGG CAGCAACTCACCAGAGGAGGTGATATACGTGATGAAGGCGAGTGTGAACGATGAATGGCATGACTACTATGCGCTAGGGA GGTTTCATGCAGAGGCCAACAGGTGGACGCCAATGGACCCGGAAGCTGATGTGGGGATCGGCATGAGGGTCGATTGGGGT AAGTTTTATGCCTCTACATCCTTCTATGATCCGGTCAAGCAGCGGCGTGTGAGCTGGGGGTTTGTCGGCGAGACCGACTC ACCCAACACCGACATAGCCAAGGGATGGGCAAGCCTCCAGGGGATTCCAAGGAAAGTAGTGCTAGACCAGAAAACCCGGA CGAACATCCTCCAATGGCCGGTGGAGGAGATCGACACCCTCCGCTACAACGCCACCAACTTCAGCGGCATCACCATCGAG TCTAGCTCTGTCATAACCCTCCCTCTCCGCCAAGTTGCTCAACTCGATATTGAGGCATCCTTTCGCCTCAACGCTTCCGC CATCGCCGCCCTCAACGAGGCCGATGTCAGCTACAACTGCAGTACAAGTGGTGGTGCCACCGAACGCGGCGCGCTCGGCC CCTTTGGCCTTCTCATCCATGCCACCAACAGCGGCAGCGAACAATTGGCAGTGTACTTTTACATTTACAAGGGTCTTGAT GGGGGCCTCCGGACCCAGTTCTGCCATGATGAGTCAGGGTCATCGCGAGCCAAGGAACTGCTGAAGCGTGTGGTGGGAAG CACCGTGCCCGTGCTCCATGGAGAGGCTTTATCCGCAAGGGTGCTCGTGGATCATTCGATTGTGGAGAGCTTTGTAATGG GTGGGAGGATGACGGTGACGTCGCGCGTCTACCCTATGAAGGCCATCCATGCGGCTGGTAGGGTGTGCGTTTTCAACAAC GCCACCGGGTCCGCGGTTACCGTCGAGAAGCTCGTGGTGCACGAGATGGCCTCAGCACCAATACAACCATACCATGATGC ATGA |
Ta_4A:739152378-739152386:+ does not have available information here.