
Microexon ID | Ta_4A:739129920-739129928:+ |
Species | Triticum Aestivum | Coordinates | 4A:739129920..739129928 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | TGGCAGCGCACCGGGTACCATTTCCAGCCGGAGAAGAACTACATGAACGATCCAAACGCTCCAATGTACTACCGTGGATGGTACCACTTCTTCTACCAGTACAACCCA |
Microexon-tag Amino Acid Seq | WQRTGYHFQPEKNYMNDPNAPMYYRGWYHFFYQYNP |
Microexon-tag spanning region | 739129641-739130073 |
Microexon-tag prediction score | 0.9663 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G485600.1x |
Reference Transcript ID | TraesCS4A02G485600.1 |
Gene ID | TraesCS4A02G485600 |
Gene Name | NA |
Transcript ID | TraesCS4A02G485600.1 |
Protein ID | |
Gene ID | TraesCS4A02G485600 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.00E-96 |
Motif start | 106 |
Motif end | 420 |
Protein seq | >TraesCS4A02G485600.1 MKSRAGTPPVLYTYASMQQRSGGGVRWRECVAVLGATALVVLVVTHALLPGARLGDLGDVVSPVLRLRRARREEAAVPSS EKTVGDKADGFPWSNAMLQWQRTGYHFQPEKNYMNDPNAPMYYRGWYHFFYQYNPEGITWGNISWGHAVSRDMVHWHHLP LAMVPDRWYDINGVLTGSATILPDGKVVLLYTGNTDTLAQVQCLAVPVDPHDPLLRTWTKHPANPVLLPPPGTSKKDFRD PMTAWFDKSDNTWRTMIGSKDDNGHAGVALMYKTKDFVKFELIPRPVHRVEGTGMWECVDFYPVGGNSNSSHEELYVLKA SMDDERHDYYALGKYDAVTNTWTPLDPEADVGIGLRYNWGKFFASTTFYDPAKRRRVMWAYVGETDSNRTDLAKGWANLQ AIPRTVALDEKTRTNVLQWPVEEIETLRHNTTDLSGITIGTGSITALHLRQAAQLDIEASFRLNTSDIAAHNEADIGYNC STSGGATNRGALGPFGLLLTNGHSEQMAMYFYVSRRLDGGLRTHFCHEESQSSLARNVVKRVVGSTVPVLNGEALSARIL VDHSIVESFVMGGRLTVTSRVYPTEAIYEAAGVYVFNNATGSTVIVDKLVVHEMHSTPIQLDLFTDLVTSTFIGRKNHTL LLSAHLCSRS* |
CDS seq | >TraesCS4A02G485600.1 ATGAAGTCACGCGCGGGCACGCCGCCGGTCCTGTACACGTACGCGTCGATGCAGCAGCGGAGCGGCGGCGGCGTGAGGTG GCGCGAGTGCGTTGCCGTGCTGGGCGCCACCGCCTTGGTGGTGCTCGTGGTCACCCATGCGCTCCTCCCAGGGGCCAGGT TGGGGGACCTGGGCGACGTGGTCAGCCCGGTGCTCCGTCTCCGGAGAGCCAGGCGGGAGGAGGCGGCCGTGCCGTCGTCG GAGAAGACGGTGGGCGATAAGGCCGATGGCTTCCCGTGGAGCAACGCCATGCTGCAGTGGCAGCGCACCGGGTACCATTT CCAGCCGGAGAAGAACTACATGAACGATCCAAACGCTCCAATGTACTACCGTGGATGGTACCACTTCTTCTACCAGTACA ACCCAGAGGGCATCACGTGGGGCAACATCTCGTGGGGCCACGCCGTGTCGCGGGACATGGTCCACTGGCACCACCTACCC CTCGCCATGGTGCCCGACCGATGGTACGACATCAACGGCGTTCTGACGGGCTCCGCCACCATACTTCCCGATGGCAAGGT CGTCCTGCTCTACACGGGGAACACCGACACCCTCGCCCAGGTACAGTGCCTTGCCGTACCTGTTGACCCTCATGATCCTC TCCTTCGTACTTGGACCAAGCACCCCGCCAACCCTGTGCTCCTTCCACCCCCCGGGACCAGCAAAAAGGACTTCCGCGAC CCCATGACAGCATGGTTCGATAAGTCCGACAACACGTGGCGCACCATGATCGGGTCCAAGGACGACAACGGGCATGCTGG CGTCGCCCTCATGTACAAGACAAAAGACTTCGTCAAGTTCGAGCTCATCCCGCGCCCGGTCCACCGCGTCGAGGGCACCG GCATGTGGGAGTGCGTCGACTTCTACCCTGTTGGGGGCAACAGCAACTCATCACACGAAGAGTTGTATGTCCTGAAGGCG AGCATGGACGATGAACGACATGACTACTACGCATTGGGAAAGTATGATGCGGTGACCAACACATGGACACCGCTGGACCC GGAGGCAGATGTGGGAATCGGACTGAGGTACAATTGGGGAAAGTTCTTTGCGTCCACGACATTCTATGATCCGGCAAAAC GGCGACGTGTGATGTGGGCGTATGTTGGTGAGACAGACTCCAACCGGACCGACCTCGCCAAGGGATGGGCAAACCTCCAG GCGATTCCGAGGACGGTGGCGCTGGACGAGAAGACCCGGACGAATGTCCTCCAATGGCCGGTGGAGGAGATCGAGACCCT CCGTCACAACACCACTGACCTCAGTGGCATCACCATTGGCACTGGTTCCATCACCGCCCTACATCTCCGCCAAGCCGCTC AGCTCGACATAGAGGCCTCGTTCCGCCTCAACACTTCTGACATCGCAGCCCACAACGAGGCCGACATCGGCTACAACTGC AGCACTAGCGGTGGTGCCACCAACCGGGGTGCACTCGGCCCCTTTGGCCTCCTCCTCACCAACGGCCACAGTGAACAAAT GGCAATGTACTTCTACGTGTCTAGGAGGCTCGACGGGGGCCTCCGGACCCACTTCTGCCATGAGGAGTCGCAGTCATCGC TGGCCAGGAATGTTGTGAAGCGGGTGGTGGGCAGCACCGTTCCGGTGCTCAACGGAGAGGCATTATCCGCCAGGATTCTT GTGGATCATTCCATTGTGGAGAGCTTCGTTATGGGTGGGAGATTGACGGTGACGTCACGGGTGTACCCGACTGAGGCCAT CTATGAGGCGGCAGGGGTGTACGTTTTCAACAATGCTACCGGCTCCACTGTCATCGTCGATAAGCTCGTGGTGCATGAGA TGCATTCAACACCGATACAACTAGATCTTTTTACGGATCTAGTGACTAGCACATTCATTGGACGGAAAAATCACACATTG TTACTGTCTGCTCATTTATGCAGCAGATCATAA |
Ta_4A:739129920-739129928:+ does not have available information here.